prot_P-littoralis_Contig63.50.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig63.50.1
Unique Nameprot_P-littoralis_Contig63.50.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length339
Homology
BLAST of mRNA_P-littoralis_Contig63.50.1 vs. uniprot
Match: A0A6H5KMS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS2_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 7.030e-105
Identity = 226/318 (71.07%), Postives = 241/318 (75.79%), Query Frame = 0
Query:   17 MRRRRAPMWITFVLSFLSRKEECLGFVAGPADPTTXXXXXXXXXXXXXXXCSPLVRRRTTGVPASSXXXPSTPTPSPEERTAARIAMPFSRTALRATGFGPXXXXXXXXXXXXXXXXXXXXXXYYPREDEEXXXXDSSHPSERGGDDGGDGKPFPELGDARKVEEPRGIGTLFESEDEVIRELSSEEYLELLKDWAPIASFASVEAIDAKVKEEATCILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVEWLASGVHALCGKRLDLPVTISSRARGD 334
            +RRRR P+ + F    L+RKE C+GFVA  A       XXXXXXXXXXXX                XX  +        RTAA  A+  SRTAL ATGFGPXXXXXXXXXXXXXXXXXXXXXX        XXXXD           G  G+PFP L DA+KVEEPRGIGTLFESEDE+IRELSSEEY  LL+DWAPIASFASVEAID KVKEEA CILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSED+GVVVEWICGNPVTLGIPGNAVEWLA G+HALCGKRLDLPVTIS +ARG+
Sbjct:    2 VRRRRIPVRLVFGFLLLTRKEGCVGFVANLAAQQHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAT--------RTAAHRAI-ASRTALYATGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-----------GDAGEPFPRLEDAKKVEEPRGIGTLFESEDELIRELSSEEYTNLLRDWAPIASFASVEAIDTKVKEEAACILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGE 299          
BLAST of mRNA_P-littoralis_Contig63.50.1 vs. uniprot
Match: D7FI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI60_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 5.670e-57
Identity = 86/95 (90.53%), Postives = 93/95 (97.89%), Query Frame = 0
Query:  241 MAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVEWLASGVHALCGKRLDLPVTISSRARGDG 335
            MAEWQPKRN+DYTK+GSKWSFGAPIGAIKGGQVDALACL+VSED+GVVVEWICGNPVTLGIPGNAVEWLA G+HALCGKRLDLPVTIS +ARG+G
Sbjct:    1 MAEWQPKRNSDYTKVGSKWSFGAPIGAIKGGQVDALACLEVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGEG 95          
BLAST of mRNA_P-littoralis_Contig63.50.1 vs. uniprot
Match: A0A0G4F895_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F895_VITBC)

HSP 1 Score: 144 bits (364), Expect = 6.480e-38
Identity = 68/145 (46.90%), Postives = 100/145 (68.97%), Query Frame = 0
Query:  183 RGIGTLFESEDEVIRELSSEEYLELLKDWAPIASFASVEAIDAKVKEEATCILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVEWLASGVHALCGKRLDLPVTI 327
            + +GTLF+SEDE IREL S+E+L+ ++ WAP+++F   E  +A  +EE      VL+ MAEW+P R+  Y      W FGAP+GA KGGQ+DA+ACL++SE +GVVV +I  NP+ +G+ GNA +WL  G+  +C +RL + + I
Sbjct:   67 QALGTLFKSEDEEIRELGSDEFLDTMRLWAPMSNFVVNEG-NASSREEGNATRLVLQQMAEWKPPRSGSYLGKTPDWRFGAPVGAFKGGQLDAVACLEISESDGVVVRYIVLNPLNIGVEGNAADWLIKGMAFICRERLGMRLDI 210          
BLAST of mRNA_P-littoralis_Contig63.50.1 vs. uniprot
Match: A0A835Z8Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z3_9STRA)

HSP 1 Score: 111 bits (277), Expect = 9.560e-27
Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 0
Query:  241 MAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLGIPGNAVEWLASGVHALCGKRLDLPVTISSRARGD 334
            M +W P R  D+ + GS W+F AP+ A K G +DA+ACL+V+E++G+ + W+C NP  LG+PGN++ WL  G+  L GKRLD+ V     ARG+
Sbjct:    1 MQKWAPARKGDFRQEGSGWAFAAPVAAFKAGNLDAVACLEVTEEDGITIAWLCENPSYLGVPGNSIAWLVKGIETLVGKRLDMAVQELPTARGE 94          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KMS2_9PHAE7.030e-10571.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI60_ECTSI5.670e-5790.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4F895_VITBC6.480e-3846.90Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A835Z8Z3_9STRA9.560e-2746.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig63contigP-littoralis_Contig63:276016..278477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig63.50.1mRNA_P-littoralis_Contig63.50.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig63 276016..278477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig63.50.1 ID=prot_P-littoralis_Contig63.50.1|Name=mRNA_P-littoralis_Contig63.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=339bp
RRFRVLFWLQRGQTMAMRRRRAPMWITFVLSFLSRKEECLGFVAGPADPT
TTNSHHARQQQHQQQACSPLVRRRTTGVPASSSSSPSTPTPSPEERTAAR
IAMPFSRTALRATGFGPAPAPKRPPRPRPTATPTPDPSPYYPREDEEDTD
NDSSHPSERGGDDGGDGKPFPELGDARKVEEPRGIGTLFESEDEVIRELS
SEEYLELLKDWAPIASFASVEAIDAKVKEEATCILTVLRGMAEWQPKRNA
DYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDEGVVVEWICGNPVTLG
IPGNAVEWLASGVHALCGKRLDLPVTISSRARGDGGGDG
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