mRNA_P-littoralis_Contig627.36.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: D8LBF3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF3_ECTSI) HSP 1 Score: 559 bits (1441), Expect = 2.170e-198 Identity = 315/366 (86.07%), Postives = 332/366 (90.71%), Query Frame = 1
Query: 13 NEAFMEDFGDLLNDGGDPYQVKNARNAAEALDTSLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGGEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLNDLAMIDEHKIKTLLDSNFKTFEEHQAVRRQEQSLADKFLGEEKAIQEQLXXXXXXXXXXXXXXXXXXEERRKAEEKG 1110
N+AFMED+GD LND GDPY+ K RNAAEALD SLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILD EFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEI KD RIEFWL LVKQNATPPTA+I VN +TARALAK+MWTNTSLTSLDLS NGIDDAAG YVA LLKRNTALVNVAL SNQLGVFACRAFGESLCSNSTLKCLSLESN LT G ++SGI+AL +MF+ NSTLTSVNLWRCALGAEAG ALSRGMESNHTITFLEVGLN LAM D+HK+KT L++NFK FEE QAVRRQE S+ADK L EEKA+QEQL XXXXXXXXXXXXXXX EERRKAEEKG
Sbjct: 4 NDAFMEDYGDSLNDAGDPYETKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLNLVKQNATPPTARIDVNSVTARALAKSMWTNTSLTSLDLSRNGIDDAAGTYVARLLKRNTALVNVALGSNQLGVFACRAFGESLCSNSTLKCLSLESNSLTSDGANMSGIQALTDMFSKNSTLTSVNLWRCALGAEAGVALSRGMESNHTITFLEVGLNGLAMADQHKVKTALENNFKRFEECQAVRRQELSIADKILAEEKAMQEQLRAXXXXXXXXXXXXXXXAEERRKAEEKG 369
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: A0A835YIK2_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK2_9STRA) HSP 1 Score: 246 bits (628), Expect = 5.240e-75 Identity = 153/341 (44.87%), Postives = 195/341 (57.18%), Query Frame = 1
Query: 85 RNAAEALDTS-LQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGGEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLNDLAMIDEHKIKTLLDSNFKTFEEHQAVRRQEQSLADKFLGEEKAIQEQLXXXXXXXXXXXXXXXXXXEERRKAEE 1104
++ E DTS LQAPNANDFSNARLIEELE R R +GFRDQD++ LQK+LD EFE EKE +I+ EK+EQA K+AGLQR+R LE+QL EE E+ ++ + WL+LVKQ+ TP TA+I+VN I+ARALAKAMWTNTSLTSLDL+ N +DD AGAY PLT GE +G R + + + N+ LTS+NLWRC LG AG L+ G+++N TITFLE+G N LA+ D +I + N ++ Q +Q D+ L EEK Q+ L EERR EE
Sbjct: 35 KSPGETFDTSQLQAPNANDFSNARLIEELEGRRMRPTGFRDQDIIALQKVLDAEFEQEKEHLIRQHNEKKEQAMKEAGLQRRRAQLEKQLTEEKQEVAQNKIVAGWLSLVKQDETPLTARIEVNSISARALAKAMWTNTSLTSLDLARNNLDDFAGAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTNEGEKPAGFRYMVQALSKNAALTSLNLWRCGLGTPAGHDLAAGIQANRTITFLELGNNSLALSDLRQIGARVKDNRCHYDALQQQAMAKQREQDRILQEEKKAQDLLRKERELHDWLEAQRLLRAEERRAEEE 375
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: A0A6H5JI07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI07_9PHAE) HSP 1 Score: 224 bits (572), Expect = 6.240e-70 Identity = 120/133 (90.23%), Postives = 123/133 (92.48%), Query Frame = 1
Query: 13 NEAFMEDFGDLLNDGGDPYQVKNARNAAEALDTSLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLV 411
N+AFMED+GD LND GDPY+ K RNAAEALD SLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILD EFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEI KD RIEFWL LV
Sbjct: 4 NDAFMEDYGDSLNDAGDPYEPKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLHLV 136
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: A0A7R9VZE3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZE3_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.450e-58 Identity = 120/293 (40.96%), Postives = 177/293 (60.41%), Query Frame = 1
Query: 16 EAFMEDFGDLLND-----GGDPYQVKNARNAAEALDTSLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGGEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLN 879
EA F DLL D P ++ R+ E L L A N + L++ELE R + GF D LQ+ D E EL E+ + +RE RE AK+A QR+R+++E ++REE EI +D R++ WL L ++ PP ++I+VN I+AR+LAKA+ T++S+ LD+S G+ D AGAY+ L+ N L+ + L SN+ G C++ G++L SN+ ++ +SLESNPLTG DISGI A+AEM + N L ++LWRC GA++G A++ M N +T +EVG N
Sbjct: 10 EALFSLFEDLLEDTSVSSSDQPLAGEDERDDDEPLVHKLDA---NALTLNELVQELEKRGLQARGFFADDAKVLQEKFDEEHELYVEAKRREKREAREADAKRAAEQRRRLLMETEVREEREEIGRDRRMKSWLLLTEEGMAPPHSRIEVNNISARSLAKALLTDSSILCLDVSNLGLSDLAGAYLCRALRSNRTLIKIELGSNKFGPKTCKSLGDALTSNNVVRFVSLESNPLTGEKNDISGIIAIAEMLSKNKALRYLSLWRCGTGADSGKAIADAMAFNDALTCIEVGYN 299
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: F0Y577_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y577_AURAN) HSP 1 Score: 168 bits (426), Expect = 1.320e-42 Identity = 114/311 (36.66%), Postives = 167/311 (53.70%), Query Frame = 1
Query: 16 EAFME---DFGDLLNDGGDPYQVKNARNAAEALDTS-LQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGGEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLNDLAMIDEHKIKTLLDSNFK 936
E F E D GD+L D D + N R +++D + L+ +A L+ E+E R+ GF + D LQK D E E E I + +RE+R+++ +A LQ+KR+ LE+QLREE + D +IE WL++V+ + T P+A+I VN +TARALAKAMW N SLTSLDLS N + D AGA + +LKR T D +G+ ALA+ ++N++LT +NLWRC LG AGA L++ + N +I L+VG N + + D+ +I +D+N K
Sbjct: 4 EDFTEEDLDAGDVLEDADDGDE--NGREREDSIDLADLKPMDAFLMKMEDLVTEMERRHLHPKGFFNDDAKELQKYFDQEHFKELEKIKEERREQRQRSXMKAQLQKKRLQLEKQLREEQDAVANDPQIEAWLSVVRSDQTRPSARIGVNSVTARALAKAMWNNKSLTSLDLSRNDLSDFAGAQIGRMLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNESTDQTGVVALAQALSSNASLTLLNLWRCDLGTTAGAELAKALHLNSSIINLDVGNNGVLVADKRRIADKVDANKK 312
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: A0A7S3XPA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPA2_HETAK) HSP 1 Score: 153 bits (387), Expect = 4.240e-39 Identity = 107/312 (34.29%), Postives = 153/312 (49.04%), Query Frame = 1
Query: 16 EAFMEDFGDLLNDGGDP-----YQVKNARNAAEALDTSLQAP-NANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGG-EDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLNDLAMIDEHKIKTLLDSN 930
+A ++F DLL+ DP A + +D P +A +N L ELE R + GF D LQK D E E +K + E++E+ A QAGL R++ ++E+QL+EE+ I +D R E WL LV+ +ATPP A++++ + AR LAKA+W N SL SLDLS NG+DD AGA+ PLT G + +G A+M +N+TLTS+NL+RC LG EAG L G+E N ++ FL+VG N + +I + N
Sbjct: 7 DAVNKEFEDLLDHFADPDDEIDITAFGATGTTDLMDLQDSQPRDALRLTNDELNAELEMRGEKPKGFFTDDAKVLQKYFDVEHEEYLAKQMKERAEQQEKLAAQAGLIRRKRLVEKQLKEELLAIQRDRRAEHWLALVRGDATPPQARVELGSVAARCLAKALWGNGSLVSLDLSRNGLDDKAGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTESGLAEKTGAPEFADMLKHNNTLTSLNLFRCHLGPEAGTELLGGLEQNASLVFLDVGGNHFLQSHDARINGKIQEN 318
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: A0A7S3ZT07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT07_9STRA) HSP 1 Score: 149 bits (377), Expect = 8.570e-38 Identity = 96/284 (33.80%), Postives = 147/284 (51.76%), Query Frame = 1
Query: 154 LIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGGEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLNDLAMIDEHKIKTLLDSNFKTFEEHQAVRRQEQSLADKFLGEE 1005
L+ E E R GF + D LQK+LD EF E + +R ++ +A LQ+KR+ LE+QLREE I + WL +K N T +I+ + I RALAKA+W+++S+T LDLS NG+ D AGA + +LKRN ++E+NPLT D +G+ ALA+ +N+TLT +N+WRC LG AGAA++ + +N T+ +VG + +D +I + N + E +A ++E++ D+ EE
Sbjct: 51 LVVEFERRGMHPKGFFNDDARELQKVLDKEFSENLEKLKAEKRAALQRNRMKAKLQKKRLQLEKQLREEQDAIHDSLDAKAWLNTIKNNQTRDACRIECDSIVCRALAKALWSSSSITCLDLSRNGLSDFAGAQLGRMLKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMETNPLTNESTDQTGVVALAKALGSNTTLTRLNMWRCDLGTAAGAAIADALVANETLIDFDVGHGGILELDAQRIADRIAHNKR---ETKAKNKREKAYRDQLAREE 331
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: A0A8K1CCX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCX8_PYTOL) HSP 1 Score: 140 bits (354), Expect = 2.140e-34 Identity = 103/304 (33.88%), Postives = 156/304 (51.32%), Query Frame = 1
Query: 124 PNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGGEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLNDLAMIDEHKIKTLLDSN---FKTFEEHQ-AVRRQEQSLADKFLGEEKAIQEQ 1023
P+A + + E+ +R + GF + D LQ+ + E EKE+ + + + + + + R+RM ER+LREE++EI +D R+E WL L K+N TP A ++++ I RAL K++ N SL SL LS N +DDAAG Y+A LLKRNT SNPLT +D+SGI ALA LWR LG + G +++G+E N T+ ++VG N +A D +I T L N F FE Q AVR+ + + A++ G ++A+++Q
Sbjct: 46 PDAFALTQNEIRREMIDRGIQPKGFYNDDAARLQEEFNREHAAEKEARMTQKLQFAAKTYLKETVHRRRMERERELREEVAEIAQDPRLEVWLDLAKRNETPTHATLRLSSIGTRALGKSLVLNHSLQSLSLSRNALDDAAGKYLALLLKRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNPLTDDEKDMSGIAALANXXXXXXXXXXXXLWRTRLGTDGGKIIAQGVEKNTTLLCVDVGNNRIAAADGVRIDTQLKKNRRGFDAFEGKQIAVRQAQLTAAEQERGRQQALRKQ 349
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: B8C189_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C189_THAPS) HSP 1 Score: 138 bits (347), Expect = 6.080e-34 Identity = 88/249 (35.34%), Postives = 136/249 (54.62%), Query Frame = 1
Query: 154 LIEELENRNSRVSGFRDQDVVTLQKILDTEFELEKESIIKHQREKREQA-------AKQAGLQRKRMMLERQLREEISEIDKDHRIEFWLTLVKQNATPPTAQIQVNPITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGGGEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLEVGLN 879
++ ELE + + GF D +Q+ D E E ++ ++KR +A AKQ +RK +LE+++ +E I D ++ W L+ + P +I +N I++RALAKA+W+N+ + SLD+S + D AGAY++ L+ N LV + L N G R+ +SL N TL+ LSLESNPL + I + +N+ LTS++LWRC LG EAG LS + N ++ +EVG N
Sbjct: 91 ILTELERKGIQPIGFYSDDAKRVQRCFDQEHE-------EYVKDKRNEALAAKVYEAKQQAERRKAALLEQEIVDEKKAISNDLQLLSWFNLLSTQSCPRHCRIDINDISSRALAKALWSNSRIQSLDVSNMHLSDLAGAYLSRSLQNNICLVKLELGGNAFGSKTLRSLADSLFVNRTLQFLSLESNPLAKD-DTRECISLFSSALESNTRLTSLSLWRCGLGLEAGRMLSNSISKNSSLIIVEVGYN 331
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Match: A0A7S1ZJ98_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJ98_TRICV) HSP 1 Score: 120 bits (301), Expect = 1.430e-29 Identity = 59/138 (42.75%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 457 ITARALAKAMWTNTSLTSLDLSCNGIDDAAGAYVAHLLKRNTALVNVALSSNQLGVFACRAFGESLCSNSTLKCLSLESNPLTGG-GEDISGIRALAEMFANNSTLTSVNLWRCALGAEAGAALSRGMESNHTITFLE 867
++ARALAKA+ T++++ SLD+S G+ D AGA++ L++N +++ + L N+LG CR+ G++LC+N L+ ++LESNPLTG +D+SGI A+A M N TL ++LWRC +G E G ++ + SN+ +T +E
Sbjct: 2 VSARALAKALLTDSAMVSLDVSHAGLSDLAGAFLCRALRKNRSMIKLELGGNRLGPKTCRSLGDALCTNDALQFVNLESNPLTGEKADDMSGIVAIAHMVRQNKTLRYLSLWRCDIGPEGGEIVADAVCSNNILTCIE 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig627.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig627.36.1 >prot_P-littoralis_Contig627.36.1 ID=prot_P-littoralis_Contig627.36.1|Name=mRNA_P-littoralis_Contig627.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=371bp MGDNNEAFMEDFGDLLNDGGDPYQVKNARNAAEALDTSLQAPNANDFSNAback to top mRNA from alignment at P-littoralis_Contig627:148477..152626- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig627.36.1 ID=mRNA_P-littoralis_Contig627.36.1|Name=mRNA_P-littoralis_Contig627.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4150bp|location=Sequence derived from alignment at P-littoralis_Contig627:148477..152626- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig627:148477..152626- >mRNA_P-littoralis_Contig627.36.1 ID=mRNA_P-littoralis_Contig627.36.1|Name=mRNA_P-littoralis_Contig627.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1113bp|location=Sequence derived from alignment at P-littoralis_Contig627:148477..152626- (Pylaiella littoralis U1_48)back to top |