mRNA_P-littoralis_Contig625.27.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig625.27.1
Unique NamemRNA_P-littoralis_Contig625.27.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 1.410e-160
Identity = 235/327 (71.87%), Postives = 263/327 (80.43%), Query Frame = 3
Query:   48 MRSCCRSPAAWQRRAFSVG-DGSSIEASAGCKKIMLAERGY--VKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREGHRTSWIETFL 1019
            M S  R     QRR FSV  DG++ ++        LAERGY  VKG ++LDD TVARLR RLPLLFRGEFDTG+YPDEMHWREGIS++DAPREIVNAWKADRTVA+VVLSE L  LAASLAGW+SAR+AQDDVVWKPPGSGPV YHQDSAYISRQF PR NNSVTMWIALD+CDRE    + +T               S SS+PSFHGA+A NYRAPA AAA SLGR+V+FE +AV PG CVVHAQDCWHGS P++S +RHRRALVVHFLRGDARFIDGHSLQ TGGPSYIYSRYK LDSN LPEEAFP+TFS++G+RT WI+TFL
Sbjct:    1 MMSRFRPVVLQQRRTFSVVVDGAASQS--------LAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREGSAADSST---------------SRSSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFL 304          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL)

HSP 1 Score: 262 bits (669), Expect = 1.020e-79
Identity = 141/288 (48.96%), Postives = 186/288 (64.58%), Query Frame = 3
Query:  162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWES-ARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLG---RKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREGHRTSWIET 1013
            GY+   +L+      R+R R   LF G+F+TG+YPDE HWREG+S   A REIVN WK DR VA++ LSE LGGLA+ L GWE  AR+AQDDV+WKPPG+  + YHQDSAYIS QF+P ENNSVT+WIALDE   E G +EYA     L S +   +++  ++  SFH  +  ++RA   AAA ++G     V+FE  +VP GGC++H  D WHGSGP+ S + HRRAL VH LR D +F      +G   P YIY RY +  S  + E  FPV ++ +G+R+  + T
Sbjct:  143 GYLCLPRLIAPDLAIRIRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPENGAVEYA-----LGSHKWRAQATETATDSSFHTDS--DHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLST 417          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP)

HSP 1 Score: 258 bits (659), Expect = 1.630e-79
Identity = 134/281 (47.69%), Postives = 178/281 (63.35%), Query Frame = 3
Query:  159 RGYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMT-EPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGR---KVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREG 989
            +G+++  Q+L++  V   RAR+  LF GEFDTGIYPDE HWR+GIS   A REI N WK+DR +A++VL E  G  A  L GW SAR+AQD V+WKP G+G V++HQDS YISRQF P ++NS+T W ALD+ D E G IEYA  + E  P  +L P+         FHG    +Y+ P   AAAS G+   +V+   + VP G  VVH Q+ WHGSG + S +R RRAL +H LRGD +F++         P YIY RYKM D+++L +  FP  +  +G
Sbjct:   66 KGFLQLGQVLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEETGVIEYAAGSHEWQPRRELEPQ---------FHGLQ--DYQQPLRQAAASAGKDLSQVEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC)

HSP 1 Score: 253 bits (646), Expect = 3.300e-78
Identity = 131/280 (46.79%), Postives = 176/280 (62.86%), Query Frame = 3
Query:  162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSE-QLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRKVKFEEIA---VPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREG 989
            G+V+  ++L    V   R+R+  LF G+FDTGIYPDE HWR+GIS   A REI N WK+D+T+A++VL ER G  A  L GW SAR+AQD ++WKP G+G V++HQDS YIS+QF+P ENNS+T W ALD+ D E G IEYA+ +    ++ +LAPE         FH A   +Y+     AAAS G+++    IA   VP G  V H Q+ WHGSG + S  R RRAL VH LRGD +F++         P YIY RYK+ + ++L +  FP  +  +G
Sbjct:   17 GFVQLGEVLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEETGVIEYASGSHEWEADRELAPE---------FHAAR--DYQQGLRRAAASAGKEMSQVNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.910e-76
Identity = 146/312 (46.79%), Postives = 184/312 (58.97%), Query Frame = 3
Query:   51 RSCCRSPAAWQRRAFSVGDGSSIEASAGCKKIMLAERGYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGW-ESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHG-ANALNYRAPAVAAAASLGRKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFS 980
            R   R+ +A  RR  S      + A A  K   LA  G+V   ++L D  V R R R   LF+G FDTGIYPDE HWREGISK DA REIVN WKAD  +A VV S  LG LA  L GW   AR+AQDDV+WKPP +G VA+HQDSAYIS QF P ENNSVT+WIALD+ D++ G +EY   +   P+ +    ++S S+   FHG A+ L   A A  +A      ++ + I V  G  +VH QD WHGS   +S+ RHRRAL VH +R D  + D      T  P YIY RY +    +  +E FP T++
Sbjct:   14 RETARTLSALPRRLSST-TAPVVSADASAK---LARDGFVAVGKVLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDTGVVEYCVGSHLWPNNKAKETTASGSA---FHGQAHHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S1XNM5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.370e-74
Identity = 133/282 (47.16%), Postives = 174/282 (61.70%), Query Frame = 3
Query:  162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWES-ARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLG-RKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAF-PVTFSREGHRT 998
            G+V    ++       LR     LFRG+F  G+YPDE HWREGISK DA REIVN WKA   VA V LSER+G LAA L GW + AR+ QDD++WKP G+G VA+H D+AYIS  F P E+NSVT+WIALD+ D E G + YA  +   PS   A +  +  +  +FHG      R PA  AAA+ G    +FEE+ VP GG V H QD WHGSGP++S +R RRAL +H++R DA F +         P YIY RY + + +    E F P+ ++ +G+R+
Sbjct:   14 GFVARPGVVAAGEAKVLREHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRPYEDNSVTVWIALDDADAETGVVAYAPGSHAWPS--AADKEKASVTDAAFHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRS 287          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA)

HSP 1 Score: 244 bits (624), Expect = 3.940e-74
Identity = 143/315 (45.40%), Postives = 183/315 (58.10%), Query Frame = 3
Query:  150 LAERGYVKGT-QLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGS--------------------GPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTE---PL------PSEQLAPESSSPSSIPSFHGANALNYRAPAVAAA--ASLGRKVK-FEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGT------GGPSYIYSRYKMLDSNALPEEAFPVTF 977
            L+ RG+     QLL   T A++R RLP LFRGEFDTG YPDE HWREGISK  A REI NAWK+DRT+A+VVL+E LG L A +  W+S R+AQDD+VWKPP                        V +HQDSAYIS QF P ++NSVT+W+AL++ D+E G +EYA  +    PL         +    S S S I SFH A+  +YR   + AA  A  G   +  E + V  G  + H QD +HGSGP++ST RHRRALV H++RGD  F+   S   +      G  SYIY RY+  +S  +    FPV +
Sbjct:   26 LSARGFAPTNHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKESGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.260e-73
Identity = 150/365 (41.10%), Postives = 193/365 (52.88%), Query Frame = 3
Query:  156 ERGYVK--GTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGP----------------VAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEP--------------------------LPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLG------------RKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARF------------IDGHSLQGTGGPS-YIYSRYKMLDSNALPEEAFPVTFSREG-----HRTSWIETFLRSH 1028
            +RGY K  G  L  D  +A +R R+PL+FRG FDTG+YPDE HWREGIS   A REI NAWK+DRTVA+VVL E +G L A + GWES RVAQDD+VWK P  G                 V +HQDSAYIS+QF P ENNS+T+WI+LD+ D E G +EYA  +                            +P+E    +  S   + SFH + +  YR   + AA S G              V  E   V  G  + H QD WHGSGP+ S  RHRRALVVH+L+GD  F            +   S     GP+ YIY RYK   S  + E+ FP+ ++R+       RT+W+++F+  H
Sbjct:   92 QRGYAKSKGRILSKDRCLA-IRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEESGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEGS--LLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSFIGQH 453          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA)

HSP 1 Score: 240 bits (613), Expect = 5.790e-73
Identity = 127/275 (46.18%), Postives = 173/275 (62.91%), Query Frame = 3
Query:  162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWES-ARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRK-VKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFS 980
            G++    L+D+ TV  L+AR   LF G+F+TGIYPDE HWREGIS+ DA REIVN WKAD  V +VV S+ +G +A++L GW++ +RV QDD++WKPP +G VA+HQD+AYIS QF P +NNSVT+WIALD+ D E G +EY       P   L  ES   S++ S   + +  Y  P   AA   G++  +   +AVP GG + H QD WHGS  ++S  RHRRAL +H ++ D  +      +    P YIY RY +  S+   +  FPVT+S
Sbjct:   40 GFLLVPNLIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEETGVVEYC------PGSHLWDESGPSSAVSSAFHSPSEGYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYVLPGSHTPEDSFFPVTYS 302          
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A812ULF0_9DINO (EctD protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812ULF0_9DINO)

HSP 1 Score: 233 bits (593), Expect = 9.740e-70
Identity = 133/280 (47.50%), Postives = 168/280 (60.00%), Query Frame = 3
Query:  162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPS---YIYSRYKMLD-SNALPEEAFPVTFSREG 989
            G++    LLD    A LR+    LF G+F TGIYPDE HWREGISK D  REIVNAWK+   VAAV L  R   LAA L GW+S R+ QDDV+WKP G+  V YHQDSAYIS+ FVP   NSVT+WIALD+ D E G +EYA  +   P+ + +   S+      FHGA   +  +   AAAA+   +++ + + VP G  V H QD WHGSGP+ +  R RRAL VH LRG             G PS   YIY RY + + S+ + E+ FP+ +S EG
Sbjct:   15 GFLLVENLLDAEAAAELRSHFAELFAGKFPTGIYPDEWHWREGISKPDKFREIVNAWKSSPLVAAVALRARTAQLAAELMGWKSTRLGQDDVLWKPAGASGVGYHQDSAYISQNFVPVAENSVTVWIALDDADAETGVVEYAVGSHRWPAAKASAGDSA------FHGAE--DELSSVRAAAAAAKAELEIKRLKVPCGAAVFHHQDVWHGSGPNTTKDRPRRALGVHLLRG----------LPFGRPSAQDYIYGRYVLAEGSSEVNEQFFPILWSGEG 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W5_ECTSI1.410e-16071.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4GPA4_9EUGL1.020e-7948.96Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0E1W7_9CRYP1.630e-7947.69Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1I9R4_GUITC3.300e-7846.79Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A2R5GIF2_9STRA3.910e-7646.79Phytanoyl-CoA dioxygenase domain-containing protei... [more]
A0A7S1XNM5_9STRA2.370e-7447.16Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S0FL38_9STRA3.940e-7445.40Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A6U3ZUB2_9STRA1.260e-7341.10Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2S8Y4_9STRA5.790e-7346.18Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A812ULF0_9DINO9.740e-7047.50EctD protein n=1 Tax=Symbiodinium sp. CCMP2456 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig625contigP-littoralis_Contig625:63757..66497 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6W5
PFAMsPhyH
Model size1315
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons5
Evalue7.9e-163
EggNOG OGs2BUAT@1|root,2S22Y@2759|Eukaryota
Ec32 ortholog descriptionPhytanoyl-CoA dioxygenase
Ec32 orthologEc-01_011990.1
DescriptionPhytanoyl-CoA dioxygenase (PhyH)
Cds size987
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig625.27.1prot_P-littoralis_Contig625.27.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig625 64041..66453 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791304.6526425-UTR-P-littoralis_Contig625:63756..640401680791304.6526425-UTR-P-littoralis_Contig625:63756..64040Pylaiella littoralis U1_48UTRP-littoralis_Contig625 63757..64040 -
1680791304.7432084-UTR-P-littoralis_Contig625:66453..664971680791304.7432084-UTR-P-littoralis_Contig625:66453..66497Pylaiella littoralis U1_48UTRP-littoralis_Contig625 66454..66497 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791304.6690745-CDS-P-littoralis_Contig625:64040..641811680791304.6690745-CDS-P-littoralis_Contig625:64040..64181Pylaiella littoralis U1_48CDSP-littoralis_Contig625 64041..64181 -
1680791304.6858099-CDS-P-littoralis_Contig625:64476..647961680791304.6858099-CDS-P-littoralis_Contig625:64476..64796Pylaiella littoralis U1_48CDSP-littoralis_Contig625 64477..64796 -
1680791304.7011318-CDS-P-littoralis_Contig625:65112..651701680791304.7011318-CDS-P-littoralis_Contig625:65112..65170Pylaiella littoralis U1_48CDSP-littoralis_Contig625 65113..65170 -
1680791304.7173195-CDS-P-littoralis_Contig625:65591..657861680791304.7173195-CDS-P-littoralis_Contig625:65591..65786Pylaiella littoralis U1_48CDSP-littoralis_Contig625 65592..65786 -
1680791304.7299712-CDS-P-littoralis_Contig625:66180..664531680791304.7299712-CDS-P-littoralis_Contig625:66180..66453Pylaiella littoralis U1_48CDSP-littoralis_Contig625 66181..66453 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig625.27.1

>prot_P-littoralis_Contig625.27.1 ID=prot_P-littoralis_Contig625.27.1|Name=mRNA_P-littoralis_Contig625.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=329bp
MMRSCCRSPAAWQRRAFSVGDGSSIEASAGCKKIMLAERGYVKGTQLLDD
ATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADR
TVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYI
SRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPS
SIPSFHGANALNYRAPAVAAAASLGRKVKFEEIAVPPGGCVVHAQDCWHG
SGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSN
ALPEEAFPVTFSREGHRTSWIETFLRSH*
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mRNA from alignment at P-littoralis_Contig625:63757..66497-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig625.27.1 ID=mRNA_P-littoralis_Contig625.27.1|Name=mRNA_P-littoralis_Contig625.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2741bp|location=Sequence derived from alignment at P-littoralis_Contig625:63757..66497- (Pylaiella littoralis U1_48)
ATCGCTACCCCTCGCACGTAGCTACACTCAATGAACATTTTTGAATGATG CGCTCGTGTTGTCGGTCTCCTGCGGCTTGGCAGCGCCGTGCTTTTTCTGT CGGCGATGGTAGCAGTATTGAAGCATCAGCAGGCTGCAAGAAGATCATGT TAGCTGAGCGAGGATACGTGAAAGGGACTCAACTTCTGGATGACGCCACA GTAGCAAGACTCCGCGCAAGATTGCCTCTCTTGTTCCGTGGCGAGTTTGA TACCGGGATTTACCCAGATGAGATGCACTGGAGGGAAGGAATATCGAAGA ATGATGCACCACGTGAGGTGGGGTGCATTGTCTCTCTTTCTCGCTCTTTC CTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGTTTCACGAC AATGTATGATATCATTGCAACGCGCCCGGTGTGTGCATGATGTCACAGCG GGGTGGTGTTTGGTGTGTATGACTAGTACGCATGTACAATTTCAGGGTAC GATAGCACGATCATTTCATACAAGAGAACGATACGACAGGCGATACCTTG AAAAATAAATTCCGCGTCGCCTTGCGCTGTCCTCATAGTCTAGGTAAATC CTACTGCAGGTTGCTCCTCAACAAGCAGTGCAAGCAGACGACCCTGGTCT GTCAGCTTTGTACAGCACGTCAGCTTCGACCCCTCGTCTATGTTGCCATA CTGCCATTCAGATAGTCAACGCATGGAAGGCGGATCGTACCGTGGCCGCT GTCGTATTGAGCGAACGCCTCGGGGGTCTAGCCGCTTCGCTTGCAGGCTG GGAGTCCGCGAGAGTTGCGCAGGACGATGTTGTTTGGAAACCCCCGGGGT CTGGGCCTGTGGCTTATCATCAGGATTCAGCGTATATCAGCAGGCAGTTT GTTCCGGTGAGCGTTATCCGCTCCCGAGATTGAATTTCTTGAACTTCATG TATCTTGTACACATAGTATGGGGAGTGACGTACGTCTGTGGTGTAGAAAT TTTGATTGAAACCGAACGCCGTCGTGGTGGAGCCGTGCATATAGCCAGAC ACAACTTGGCACCAACACGAACGCTAGCAGCACCAGCTTTCGTCATATCA TCACTTTATATCACCTCGCATGTTAAGCTTGAGGCTTTACCTACAGCTTT AGCATGATGTGGAGGGGATCATTTGAGGCGCGGGCGTGAACTCACAAACT ATGTATACTTCTCGACACACGTGCGTCCCGCAATCTCCCGTTAATCTGAT GCCCACCGCCTGCCCACCGTCCTCGTCTTTCCCGTTTGGCCTGCACCGTG TGCGTGTTTGTATTTTGTCCGGCCCAGAGAGAGAACAATTCAGTGACCAT GTGGATTGCTTTGGATGAATGCGATCGGGAAGTAGGTGAGTGCGGAGGGT TGTAGCGGGTTTCCATTGCCTGTTTCGAGGCTGTTCGGCACAGCAACGCG TCTTAGGCGAGCTACGGAAAGCAGAAGAGAGTTTTGAAGCCGGATGAGGC CAGCCTTTCGACCTTTATCGTGCGCGTGAAAGTACAGTGTGCGCGTCGGA GCATCGCGCTTCTGCTACAATGCGTGCTTCATATACTCCACGCCCAATGA TGATACGACTGAGTATAATACCGTGGGAAAAAGTAATTTTTCGATCGGAA CAACCAGCGCCGTGTTTGAACACATTGCTCAATGCTTAACTTTGTTTGCA GGAACGATTGAGTACGCCACCATGACCGAACCGCTCCCGTCGGAGCAGTT GGCACCCGAGTCCTCCAGTCCCTCTTCCATCCCCTCCTTTCACGGAGCCA ATGCGCTGAATTACCGCGCACCGGCCGTGGCTGCTGCTGCCAGCCTCGGG CGTAAGGTGAAGTTCGAGGAGATTGCTGTACCGCCTGGAGGATGCGTGGT GCACGCGCAGGATTGCTGGCACGGGAGCGGCCCTCACCTTTCGACAAAGC GCCACCGTCGAGCCCTGGTGGTGCACTTTCTCAGAGGAGATGCGAGATTC ATCGACGGGCACTCGCTTCAGGTAGGCCTATAGTACTCGCCCTCGTCGGC ATGTGTTGTGTTGAGAGAGAGCGAGAGATGCAGTAGAGTTCGCTCAACAA TCAGGACGGAGAGAGGGTACGAACGCTACGCGGTGGGCCTCGTCGCGAAG AGAGGCGCCTCGTAGCCTTTGGCCCTGTGGTTTCCCCGTCACCAGGTCTT GCCCCCATCCCATTCATACACGATAGTTCTCCATCCTTCACACCGCATCA TAAAAACAATTTCGGTAGTCGTCTAAACGGTAGTGGTGCCGAATTGTGCT GCACGTCGCGCCGCAGGGAACGGGCGGTCCTTCCTACATCTACAGCCGGT ACAAGATGTTAGACAGCAATGCCTTGCCTGAGGAGGCGTTTCCCGTCACC TTCTCCCGAGAAGGGCACCGGACAAGCTGGATCGAGACATTCCTCAGATC ACATTAGTTTTGGGGAATACCCGAGATGCACCAAGCAGGTTCTTGACAGC AGGTGGACAGGTGGTCTTGCCAGGTGGTCGGTGATTCAACGAACAAAATT TCCACGGGTTCTGTCGTCGAGTACAGTGCCAATTGTAGGAAAAGAAACCT CTCAAAATTTGAGAGTGACGATAGTCTGGCGATACGTCGAACGTCTCAAA ATGGCAACGCGCCAACTACTAGCGGCGTGCACGCTCAAATCATTTTATAC ATTTTGAGTCTAGTTTGACGCAGTTCCGTGCTGACAAATTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig625:63757..66497-

>mRNA_P-littoralis_Contig625.27.1 ID=mRNA_P-littoralis_Contig625.27.1|Name=mRNA_P-littoralis_Contig625.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=987bp|location=Sequence derived from alignment at P-littoralis_Contig625:63757..66497- (Pylaiella littoralis U1_48)
ATGATGCGCTCGTGTTGTCGGTCTCCTGCGGCTTGGCAGCGCCGTGCTTT
TTCTGTCGGCGATGGTAGCAGTATTGAAGCATCAGCAGGCTGCAAGAAGA
TCATGTTAGCTGAGCGAGGATACGTGAAAGGGACTCAACTTCTGGATGAC
GCCACAGTAGCAAGACTCCGCGCAAGATTGCCTCTCTTGTTCCGTGGCGA
GTTTGATACCGGGATTTACCCAGATGAGATGCACTGGAGGGAAGGAATAT
CGAAGAATGATGCACCACGTGAGATAGTCAACGCATGGAAGGCGGATCGT
ACCGTGGCCGCTGTCGTATTGAGCGAACGCCTCGGGGGTCTAGCCGCTTC
GCTTGCAGGCTGGGAGTCCGCGAGAGTTGCGCAGGACGATGTTGTTTGGA
AACCCCCGGGGTCTGGGCCTGTGGCTTATCATCAGGATTCAGCGTATATC
AGCAGGCAGTTTGTTCCGAGAGAGAACAATTCAGTGACCATGTGGATTGC
TTTGGATGAATGCGATCGGGAAGTAGGAACGATTGAGTACGCCACCATGA
CCGAACCGCTCCCGTCGGAGCAGTTGGCACCCGAGTCCTCCAGTCCCTCT
TCCATCCCCTCCTTTCACGGAGCCAATGCGCTGAATTACCGCGCACCGGC
CGTGGCTGCTGCTGCCAGCCTCGGGCGTAAGGTGAAGTTCGAGGAGATTG
CTGTACCGCCTGGAGGATGCGTGGTGCACGCGCAGGATTGCTGGCACGGG
AGCGGCCCTCACCTTTCGACAAAGCGCCACCGTCGAGCCCTGGTGGTGCA
CTTTCTCAGAGGAGATGCGAGATTCATCGACGGGCACTCGCTTCAGGGAA
CGGGCGGTCCTTCCTACATCTACAGCCGGTACAAGATGTTAGACAGCAAT
GCCTTGCCTGAGGAGGCGTTTCCCGTCACCTTCTCCCGAGAAGGGCACCG
GACAAGCTGGATCGAGACATTCCTCAGATCACATTAG
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