mRNA_P-littoralis_Contig625.27.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI) HSP 1 Score: 464 bits (1193), Expect = 1.410e-160 Identity = 235/327 (71.87%), Postives = 263/327 (80.43%), Query Frame = 3
Query: 48 MRSCCRSPAAWQRRAFSVG-DGSSIEASAGCKKIMLAERGY--VKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREGHRTSWIETFL 1019
M S R QRR FSV DG++ ++ LAERGY VKG ++LDD TVARLR RLPLLFRGEFDTG+YPDEMHWREGIS++DAPREIVNAWKADRTVA+VVLSE L LAASLAGW+SAR+AQDDVVWKPPGSGPV YHQDSAYISRQF PR NNSVTMWIALD+CDRE + +T S SS+PSFHGA+A NYRAPA AAA SLGR+V+FE +AV PG CVVHAQDCWHGS P++S +RHRRALVVHFLRGDARFIDGHSLQ TGGPSYIYSRYK LDSN LPEEAFP+TFS++G+RT WI+TFL
Sbjct: 1 MMSRFRPVVLQQRRTFSVVVDGAASQS--------LAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDREGSAADSST---------------SRSSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFL 304
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL) HSP 1 Score: 262 bits (669), Expect = 1.020e-79 Identity = 141/288 (48.96%), Postives = 186/288 (64.58%), Query Frame = 3
Query: 162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWES-ARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLG---RKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREGHRTSWIET 1013
GY+ +L+ R+R R LF G+F+TG+YPDE HWREG+S A REIVN WK DR VA++ LSE LGGLA+ L GWE AR+AQDDV+WKPPG+ + YHQDSAYIS QF+P ENNSVT+WIALDE E G +EYA L S + +++ ++ SFH + ++RA AAA ++G V+FE +VP GGC++H D WHGSGP+ S + HRRAL VH LR D +F +G P YIY RY + S + E FPV ++ +G+R+ + T
Sbjct: 143 GYLCLPRLIAPDLAIRIRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPENGAVEYA-----LGSHKWRAQATETATDSSFHTDS--DHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLST 417
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP) HSP 1 Score: 258 bits (659), Expect = 1.630e-79 Identity = 134/281 (47.69%), Postives = 178/281 (63.35%), Query Frame = 3
Query: 159 RGYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMT-EPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGR---KVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREG 989
+G+++ Q+L++ V RAR+ LF GEFDTGIYPDE HWR+GIS A REI N WK+DR +A++VL E G A L GW SAR+AQD V+WKP G+G V++HQDS YISRQF P ++NS+T W ALD+ D E G IEYA + E P +L P+ FHG +Y+ P AAAS G+ +V+ + VP G VVH Q+ WHGSG + S +R RRAL +H LRGD +F++ P YIY RYKM D+++L + FP + +G
Sbjct: 66 KGFLQLGQVLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEETGVIEYAAGSHEWQPRRELEPQ---------FHGLQ--DYQQPLRQAAASAGKDLSQVEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC) HSP 1 Score: 253 bits (646), Expect = 3.300e-78 Identity = 131/280 (46.79%), Postives = 176/280 (62.86%), Query Frame = 3
Query: 162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSE-QLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRKVKFEEIA---VPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFSREG 989
G+V+ ++L V R+R+ LF G+FDTGIYPDE HWR+GIS A REI N WK+D+T+A++VL ER G A L GW SAR+AQD ++WKP G+G V++HQDS YIS+QF+P ENNS+T W ALD+ D E G IEYA+ + ++ +LAPE FH A +Y+ AAAS G+++ IA VP G V H Q+ WHGSG + S R RRAL VH LRGD +F++ P YIY RYK+ + ++L + FP + +G
Sbjct: 17 GFVQLGEVLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEETGVIEYASGSHEWEADRELAPE---------FHAAR--DYQQGLRRAAASAGKEMSQVNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA) HSP 1 Score: 249 bits (635), Expect = 3.910e-76 Identity = 146/312 (46.79%), Postives = 184/312 (58.97%), Query Frame = 3
Query: 51 RSCCRSPAAWQRRAFSVGDGSSIEASAGCKKIMLAERGYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGW-ESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHG-ANALNYRAPAVAAAASLGRKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFS 980
R R+ +A RR S + A A K LA G+V ++L D V R R R LF+G FDTGIYPDE HWREGISK DA REIVN WKAD +A VV S LG LA L GW AR+AQDDV+WKPP +G VA+HQDSAYIS QF P ENNSVT+WIALD+ D++ G +EY + P+ + ++S S+ FHG A+ L A A +A ++ + I V G +VH QD WHGS +S+ RHRRAL VH +R D + D T P YIY RY + + +E FP T++
Sbjct: 14 RETARTLSALPRRLSST-TAPVVSADASAK---LARDGFVAVGKVLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDTGVVEYCVGSHLWPNNKAKETTASGSA---FHGQAHHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S1XNM5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA) HSP 1 Score: 244 bits (622), Expect = 2.370e-74 Identity = 133/282 (47.16%), Postives = 174/282 (61.70%), Query Frame = 3
Query: 162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWES-ARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLG-RKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAF-PVTFSREGHRT 998
G+V ++ LR LFRG+F G+YPDE HWREGISK DA REIVN WKA VA V LSER+G LAA L GW + AR+ QDD++WKP G+G VA+H D+AYIS F P E+NSVT+WIALD+ D E G + YA + PS A + + + +FHG R PA AAA+ G +FEE+ VP GG V H QD WHGSGP++S +R RRAL +H++R DA F + P YIY RY + + + E F P+ ++ +G+R+
Sbjct: 14 GFVARPGVVAAGEAKVLREHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRPYEDNSVTVWIALDDADAETGVVAYAPGSHAWPS--AADKEKASVTDAAFHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRS 287
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.940e-74 Identity = 143/315 (45.40%), Postives = 183/315 (58.10%), Query Frame = 3
Query: 150 LAERGYVKGT-QLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGS--------------------GPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTE---PL------PSEQLAPESSSPSSIPSFHGANALNYRAPAVAAA--ASLGRKVK-FEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGT------GGPSYIYSRYKMLDSNALPEEAFPVTF 977
L+ RG+ QLL T A++R RLP LFRGEFDTG YPDE HWREGISK A REI NAWK+DRT+A+VVL+E LG L A + W+S R+AQDD+VWKPP V +HQDSAYIS QF P ++NSVT+W+AL++ D+E G +EYA + PL + S S S I SFH A+ +YR + AA A G + E + V G + H QD +HGSGP++ST RHRRALV H++RGD F+ S + G SYIY RY+ +S + FPV +
Sbjct: 26 LSARGFAPTNHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKESGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.260e-73 Identity = 150/365 (41.10%), Postives = 193/365 (52.88%), Query Frame = 3
Query: 156 ERGYVK--GTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGP----------------VAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEP--------------------------LPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLG------------RKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARF------------IDGHSLQGTGGPS-YIYSRYKMLDSNALPEEAFPVTFSREG-----HRTSWIETFLRSH 1028
+RGY K G L D +A +R R+PL+FRG FDTG+YPDE HWREGIS A REI NAWK+DRTVA+VVL E +G L A + GWES RVAQDD+VWK P G V +HQDSAYIS+QF P ENNS+T+WI+LD+ D E G +EYA + +P+E + S + SFH + + YR + AA S G V E V G + H QD WHGSGP+ S RHRRALVVH+L+GD F + S GP+ YIY RYK S + E+ FP+ ++R+ RT+W+++F+ H
Sbjct: 92 QRGYAKSKGRILSKDRCLA-IRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEESGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEGS--LLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSFIGQH 453
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA) HSP 1 Score: 240 bits (613), Expect = 5.790e-73 Identity = 127/275 (46.18%), Postives = 173/275 (62.91%), Query Frame = 3
Query: 162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWES-ARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRK-VKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPSYIYSRYKMLDSNALPEEAFPVTFS 980
G++ L+D+ TV L+AR LF G+F+TGIYPDE HWREGIS+ DA REIVN WKAD V +VV S+ +G +A++L GW++ +RV QDD++WKPP +G VA+HQD+AYIS QF P +NNSVT+WIALD+ D E G +EY P L ES S++ S + + Y P AA G++ + +AVP GG + H QD WHGS ++S RHRRAL +H ++ D + + P YIY RY + S+ + FPVT+S
Sbjct: 40 GFLLVPNLIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEETGVVEYC------PGSHLWDESGPSSAVSSAFHSPSEGYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYVLPGSHTPEDSFFPVTYS 302
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Match: A0A812ULF0_9DINO (EctD protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812ULF0_9DINO) HSP 1 Score: 233 bits (593), Expect = 9.740e-70 Identity = 133/280 (47.50%), Postives = 168/280 (60.00%), Query Frame = 3
Query: 162 GYVKGTQLLDDATVARLRARLPLLFRGEFDTGIYPDEMHWREGISKNDAPREIVNAWKADRTVAAVVLSERLGGLAASLAGWESARVAQDDVVWKPPGSGPVAYHQDSAYISRQFVPRENNSVTMWIALDECDREVGTIEYATMTEPLPSEQLAPESSSPSSIPSFHGANALNYRAPAVAAAASLGRKVKFEEIAVPPGGCVVHAQDCWHGSGPHLSTKRHRRALVVHFLRGDARFIDGHSLQGTGGPS---YIYSRYKMLD-SNALPEEAFPVTFSREG 989
G++ LLD A LR+ LF G+F TGIYPDE HWREGISK D REIVNAWK+ VAAV L R LAA L GW+S R+ QDDV+WKP G+ V YHQDSAYIS+ FVP NSVT+WIALD+ D E G +EYA + P+ + + S+ FHGA + + AAAA+ +++ + + VP G V H QD WHGSGP+ + R RRAL VH LRG G PS YIY RY + + S+ + E+ FP+ +S EG
Sbjct: 15 GFLLVENLLDAEAAAELRSHFAELFAGKFPTGIYPDEWHWREGISKPDKFREIVNAWKSSPLVAAVALRARTAQLAAELMGWKSTRLGQDDVLWKPAGASGVGYHQDSAYISQNFVPVAENSVTVWIALDDADAETGVVEYAVGSHRWPAAKASAGDSA------FHGAE--DELSSVRAAAAAAKAELEIKRLKVPCGAAVFHHQDVWHGSGPNTTKDRPRRALGVHLLRG----------LPFGRPSAQDYIYGRYVLAEGSSEVNEQFFPILWSGEG 276 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig625.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig625.27.1 >prot_P-littoralis_Contig625.27.1 ID=prot_P-littoralis_Contig625.27.1|Name=mRNA_P-littoralis_Contig625.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=329bp MMRSCCRSPAAWQRRAFSVGDGSSIEASAGCKKIMLAERGYVKGTQLLDDback to top mRNA from alignment at P-littoralis_Contig625:63757..66497- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig625.27.1 ID=mRNA_P-littoralis_Contig625.27.1|Name=mRNA_P-littoralis_Contig625.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2741bp|location=Sequence derived from alignment at P-littoralis_Contig625:63757..66497- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig625:63757..66497- >mRNA_P-littoralis_Contig625.27.1 ID=mRNA_P-littoralis_Contig625.27.1|Name=mRNA_P-littoralis_Contig625.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=987bp|location=Sequence derived from alignment at P-littoralis_Contig625:63757..66497- (Pylaiella littoralis U1_48)back to top |