prot_P-littoralis_Contig625.15.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: A0A6H5KKW4_9PHAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW4_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 2.080e-145 Identity = 209/248 (84.27%), Postives = 222/248 (89.52%), Query Frame = 0
Query: 1 MEFPGAPEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDWTWQKEAKALQEKAQAAEGVGVAEGDRDARAALKLSMDNILMGLVEKYIDGDGEGEAG-----RGVKRKVGGAATAASSANAS 243
MEFPGA EDPEQRSFIDPVWLQQWGLGP+NALDYFALSPFYDKACNNEQCRMQ VDP+EGLLNLTGLEFML +LPPEMSFL PGQPAP GPQPRRLFVIKKQVRKS +SVEVQAIYY+MEGVIYQ PTVQKLIKSRLNKFTHHLNNAFVELSKL+ L DS GGYDW WQKEAK LQEKA+AAEGVGVAE DRDA+AALKLSMDNILMGLVEKYIDGDGEG+ G RG KRK G A ++S +A+
Sbjct: 1 MEFPGAAEDPEQRSFIDPVWLQQWGLGPQNALDYFALSPFYDKACNNEQCRMQSVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGKEPAARGAKRKADGEAVTSASLDAA 248
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: D7G6X0_ECTSI (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X0_ECTSI) HSP 1 Score: 290 bits (743), Expect = 8.820e-97 Identity = 138/150 (92.00%), Postives = 143/150 (95.33%), Query Frame = 0
Query: 1 MEFPGAPEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVE 150
M+FPGA EDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDP+EGLLNLTGLEFML +LPPEMSFL PGQPAP GPQPRRLFVIKKQVRKS +SVEVQAIYY+MEGVIYQ PTVQKLIKSRLNKFTHHLNNAF E
Sbjct: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFGE 150
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: A0A835YVL9_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL9_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.120e-48 Identity = 97/216 (44.91%), Postives = 126/216 (58.33%), Query Frame = 0
Query: 8 EDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGV-DPKEGLLNLTGLEFMLEDLPPEMSFL-QPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDWTWQKEAKALQEKAQAAEGVGVAEGDRDAR-AALKLSMDNILMGLVEKYIDGDGEG 220
ED Q SF D +WL+ + LGPE A+DYFALSPFYD+ NNE CRMQG+ D + +TG+E+++E+LPPE L +PG P PQPR L VIKKQ RKS+T EV+ +YY+M+G IYQ P+ LI SRL K L+ +F L L N + G YDW W EA A +A++ D IL+ LV +Y +GEG
Sbjct: 16 EDQTQLSFQDTMWLRSFYLGPETAIDYFALSPFYDRTSNNELCRMQGLTDHVAAMQTMTGIEYVVEELPPETDELPEPGAP----PQPRHLMVIKKQYRKSKTQAEVRGVYYIMDGTIYQAPSALALITSRLQKAAFMLSESFAALRALPAHN-ARGAYDWPWNAEAXXXXXXXXXXXXXXXXXXQSQAALSAVRAGADAILLQLVSRYARSEGEG 226
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: A0A2R5GW25_9STRA (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW25_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.330e-31 Identity = 75/172 (43.60%), Postives = 104/172 (60.47%), Query Frame = 0
Query: 14 SFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPKEGLLNLTGLEFMLEDLPPEMSF-LQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDWTWQKEAKALQEKAQAAEG 184
SF+D W++ +GL N LDYFA SPFYD +CNNE RMQ + GLE ML D+PP + + L P PV LF++ KQ R S+T V QA+YY+++ VIYQ P++Q+LI +RL+K T+HL NAF ++ K + S G +TW + A + Q+AEG
Sbjct: 65 SFLDDNWIRAFGLSAHNVLDYFACSPFYDTSCNNEILRMQNL----------GLE-MLADMPPGIEYRLLPSGHEPV------LFIVVKQERASKTVVRRQALYYILDKVIYQAPSLQRLIATRLSKSTNHLQNAFDQMVKAARYAPSQG---FTWHFDGDAHRAWRQSAEG 216
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: M4C4K5_HYAAE (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4K5_HYAAE) HSP 1 Score: 118 bits (296), Expect = 2.830e-28 Identity = 70/170 (41.18%), Postives = 98/170 (57.65%), Query Frame = 0
Query: 6 APEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDWTWQKEAK 173
A D SF D VWLQ + L P+ L YFALSPFYD++CNNE+ +MQ G+D L NL G+E+ L LP L P++L+VI+KQ R SRT VE A+YYV++G +YQ P + ++ SRL K ++ +N AF L+ + + G Y W + + K
Sbjct: 5 AHADDYNASFRDTVWLQSFPLNPQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGIEYEL--LPNAAKQL-----------PQQLYVIRKQRRSSRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLAAGVRFSPTEG-YAWDFSSKDK 157
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: A0A0N7L744_PLAHL (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L744_PLAHL) HSP 1 Score: 112 bits (280), Expect = 5.460e-27 Identity = 66/154 (42.86%), Postives = 91/154 (59.09%), Query Frame = 0
Query: 1 MEFPGAPEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELS 152
ME G +D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ G+D L NL G+E+ L LP L P++L++I+KQ R RT VE AIYYV++G +YQ P + ++ SRL K ++ +N AF L+
Sbjct: 1 MEVAGHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYEL--LPNAAKQL-----------PQQLYIIRKQRRNGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLA 137
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: D0NQQ4_PHYIT (Mediator of RNA polymerase II transcription subunit 6 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NQQ4_PHYIT) HSP 1 Score: 114 bits (285), Expect = 8.280e-27 Identity = 66/167 (39.52%), Postives = 93/167 (55.69%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDWTWQKEAK 173
D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ G+D L NL G+E+ L P P++LF+I+KQ R RT VE AIYYV++G +YQ P + ++ SRL K ++ +N AF L+ + + G Y W + + K
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYEL-------------LPNTAKQMPQQLFIIRKQRRSGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG-YAWDFSSKDK 157
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: A0A484EGT8_BRELC (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGT8_BRELC) HSP 1 Score: 112 bits (279), Expect = 1.250e-26 Identity = 64/158 (40.51%), Postives = 91/158 (57.59%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDW 166
D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ + E L NL G+E+ L LP L P++L++I+KQ R RT VE A+YYV++G +YQ P + ++ SRL K ++ +N AF L+ + + G Y W
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLG-LEQLKNLRGVEYEL--LPNAAKQL-----------PQQLYIIRKQRRNGRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG-YAW 150
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: A0A8K1CUM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUM6_PYTOL) HSP 1 Score: 111 bits (277), Expect = 1.660e-25 Identity = 65/165 (39.39%), Postives = 94/165 (56.97%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDWTWQKE 171
D SF D +WLQ + L + L YFALSPFYD++CNNE+ +MQ G+D L N+ G+E+ L LP L P++LF+I+KQ R RT V+ A+YYV++G +YQ P + ++ SRL K +H +N AF L+ + + G Y W + E
Sbjct: 8 DDYNASFHDTIWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNMRGIEYEL--LPNAAKQL-----------PQQLFLIQKQRRLGRTQVKPLAVYYVLDGRVYQAPNIHAMLTSRLKKCSHRVNKAFHALAAGVRFSPTEG-YAWDFSSE 155
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Match: K3WSB9_GLOUD (Mediator of RNA polymerase II transcription subunit 6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSB9_GLOUD) HSP 1 Score: 111 bits (277), Expect = 1.900e-25 Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPKEGLLNLTGLEFMLEDLPPEMSFLQPGQPAPVGPQPRRLFVIKKQVRKSRTSVEVQAIYYVMEGVIYQTPTVQKLIKSRLNKFTHHLNNAFVELSKLSTLNDSAGGYDWTWQKEAK 173
D SF D +WLQ + L + + YFALSPFYD++CNNE+ +MQ G+D L N+ G+E+ E LP L P++LF+I+KQ R RT VE AIYYV++G +YQ P + ++ SRL K ++ +N AF L+ + + G Y W + + K
Sbjct: 8 DDYNASFRDTMWLQSFPLNAQTVIHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNMRGIEY--EVLPNTAKQL-----------PQQLFLIRKQRRSGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHTLAAGVRFSPTEG-YAWDFSSKDK 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig625.15.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig625.15.2 ID=prot_P-littoralis_Contig625.15.2|Name=mRNA_P-littoralis_Contig625.15.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=289bpback to top |