mRNA_P-littoralis_Contig624.21.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: D7FQ30_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ30_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.670e-60 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1
Query: 154 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR
Sbjct: 1 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A6H5JF01_9PHAE (Dynein light chain n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF01_9PHAE) HSP 1 Score: 190 bits (482), Expect = 3.040e-60 Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 1
Query: 154 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
MSNKHQHIFAEDMSDEMC FALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR
Sbjct: 1 MSNKHQHIFAEDMSDEMCHFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A836CC04_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC04_9STRA) HSP 1 Score: 168 bits (426), Expect = 7.110e-52 Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 1
Query: 154 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
M+NKHQHIFAEDM+D+MCQFAL+TS+EAF LTI KGQVFT IAS IR+ FEK+YGRGWNVVVGR+FGAYVTHEIKTYMYFTV+PGVYVL+W+
Sbjct: 1 MANKHQHIFAEDMTDDMCQFALKTSEEAFHLTINKGQVFTAIASYIRRTFEKTYGRGWNVVVGRAFGAYVTHEIKTYMYFTVIPGVYVLIWK 92
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A482S6R4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6R4_9ARCH) HSP 1 Score: 117 bits (293), Expect = 3.490e-31 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 175 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
+FAEDMS+E + A++ +++AF LTI G V +TIA IRK F++ + RGWN +VGRSFGAYVTHEIKTY+YFTV PG YVLLW+
Sbjct: 44 VFAEDMSEEWSKDAIKAARDAFALTIASGDVHSTIADFIRKKFDRDHERGWNCIVGRSFGAYVTHEIKTYIYFTVQPGTYVLLWK 128
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A7S4E7C9_9STRA (Dynein light chain n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7C9_9STRA) HSP 1 Score: 114 bits (285), Expect = 3.670e-30 Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 1
Query: 154 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
M+ Q +FAEDMS+E F LE + +AF +G+V++ +A+ IR A EK YG+GWNVVVG+SFGA+VTHEIKTY Y +VVPGV VL+WR
Sbjct: 1 MAKATQQVFAEDMSEEKVDFCLEIATDAFNQASFQGKVYSYVANFIRAALEKQYGKGWNVVVGKSFGAFVTHEIKTYFYGSVVPGVCVLIWR 92
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A485KYL8_9STRA (Dynein light chain n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KYL8_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.290e-30 Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 1
Query: 175 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
+FAEDM+D M + + T+++AFQL + G+ F+TIA +R+ EK YGRGWN +VG SFGAYVTHEIKTY+YF+V GV VL+WR
Sbjct: 13 VFAEDMTDVMLEKVVATAKDAFQLQVASGKTFSTIAEFVRRNMEKEYGRGWNCIVGLSFGAYVTHEIKTYVYFSVASGVSVLVWR 97
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A0P1AY91_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY91_PLAHL) HSP 1 Score: 112 bits (279), Expect = 1.920e-29 Identity = 55/98 (56.12%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 154 MSNKHQH------IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
MSNK +FAEDM+D M L T+++AFQL +T + F+TIA +R+ EK YGRGWN VVG SFGAYVTHEIKTY+YF+V GV VL+W+
Sbjct: 1 MSNKSNDKFHKVVVFAEDMTDAMLDKVLSTAKDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAIGVSVLVWK 98
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A7S3H299_9STRA (Dynein light chain n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H299_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.290e-28 Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 1
Query: 163 KHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
++ +FAEDMS+E + A + +++AF +TI+ G +TIA IRK F+ + GWN +VGRSFGAYVTHEIKTY YF+V PG YVLLWR
Sbjct: 28 EYLQVFAEDMSEEWARDAQKIARDAFAITISSGDAHSTIADFIRKKFDVGHMAGWNCIVGRSFGAYVTHEIKTYTYFSVQPGTYVLLWR 116
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: H3HCG0_PHYRM (Dynein light chain n=21 Tax=Oomycota TaxID=4762 RepID=H3HCG0_PHYRM) HSP 1 Score: 108 bits (269), Expect = 5.630e-28 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 175 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVL 420
+FAEDM+D M + AL T+++AFQL +T + F+TIA +R+ EK YGRGWN VVG SFGAYVTHEIKTY+YF+V GV VL
Sbjct: 14 VFAEDMTDAMLEKALGTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVL 95
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Match: A0A225VFG7_9STRA (Dynein light chain n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VFG7_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.250e-27 Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 175 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 429
+FAEDM+D M + AL T+++AFQL +T + F+TIA +R+ EK YGRGWN VVG SFGAYVTHEIKTY+YF+V GV VL+W+
Sbjct: 14 VFAEDMTDVMLEKALSTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVLVWK 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig624.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig624.21.1 >prot_P-littoralis_Contig624.21.1 ID=prot_P-littoralis_Contig624.21.1|Name=mRNA_P-littoralis_Contig624.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=93bp MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFback to top mRNA from alignment at P-littoralis_Contig624:99061..100017- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig624.21.1 ID=mRNA_P-littoralis_Contig624.21.1|Name=mRNA_P-littoralis_Contig624.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=957bp|location=Sequence derived from alignment at P-littoralis_Contig624:99061..100017- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig624:99061..100017- >mRNA_P-littoralis_Contig624.21.1 ID=mRNA_P-littoralis_Contig624.21.1|Name=mRNA_P-littoralis_Contig624.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=279bp|location=Sequence derived from alignment at P-littoralis_Contig624:99061..100017- (Pylaiella littoralis U1_48)back to top |