mRNA_P-littoralis_Contig62.163.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 102 bits (255), Expect = 1.480e-22 Identity = 58/151 (38.41%), Postives = 84/151 (55.63%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE--------TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
P P P+ ++ ++ + A++A T TRR +RE Y+ E D D F L YW R D + + G V +PA P++ IARL+LG++ATSCQAERNFSAL ++ LR N P+KVE+ +F+RLN+HL+
Sbjct: 657 PVEPAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDG-FNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLV 806
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.920e-22 Identity = 60/148 (40.54%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE-----TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
PA +L+R+E+ R A+ A + ++ + TRR +RE Y+ E D D F L YW R D + + G V +PA P++ IARL+LG++ATSCQAERNFSAL ++ LR N P+KVE+ +F+RLN+HL+
Sbjct: 465 PAPKKKKLSRLEERRAARVAAATTGGDETGSLEDQSPSTTRRVLIEREVLVYLAENPQLDVDG-FNVLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNFSALAHLIGQLRCNMLPSKVERMMFIRLNRHLV 611
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.750e-20 Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE-----TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGL-DKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
PA+ +L+R+E+ R A+ A A AS +V+ RR +RE Y+ E + D F L +W R D + +GNV +PA P++ IARL LG++A+SCQAERNFSAL ++ LR N KVE+ + +RLN+HL+
Sbjct: 84 PASKRKKLSRLEERRAARVA-AASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDD-FNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 229
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.830e-19 Identity = 59/148 (39.86%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 1 PAAPVPQLTRMEKIRLAQNAKIARPNTASSAVRE-----TRRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGL-DKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
PA+ +L+R+E+ R A+ A A AS +V+ RR +RE Y+ E + D F L +W R D + +GNV +PA P++ IARL LG++A+SCQAERNFSAL ++ LR N KVE+ + +RLN+HL+
Sbjct: 649 PASKRKKLSRLEERRAARVA-AASDGGASGSVQAQGSATNRRVLIEREVLVYLAETEQVEVDD-FNVLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHLIGHLRCNMLSRKVERMMLIRLNRHLV 794
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 2.400e-19 Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 106 RRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
RR +RE Y+ E D D F L +W R D + + G V +PA P++ IARLHLG++ATSCQAERNFSAL ++ DL N +VE+ + +RLNKHL+
Sbjct: 501 RRVLIEREMLVYLAEQPQVDVDD-FNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSHRVERMMLVRLNKHLL 607
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5L7P7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P7_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 1.570e-18 Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 106 RRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLN 414
RR +RE Y+ E D D F L +W R D + + G V +PA P++ IARLHLG++ATSCQAERNFSAL ++ D R N +VE+ + +RLN
Sbjct: 118 RRVLIEREMLVYLAEQPQVDVDD-FNLLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDFRCNMLSHRVERMMLVRLN 220
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.920e-18 Identity = 46/103 (44.66%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 121 QREYAEYMKEAALTDTDPTFTALEYWKPRAVDGL-DKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
+RE Y+ E D D F + +W R + + +G V APA P++ IARLHLG++ATSCQAERNFSAL ++ LR N KVE+ + +RLN+HL+
Sbjct: 388 EREVLVYLAEQPQVDVDG-FNLVGFWNRRGTNSVCPTTGKVTAPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGTLRCNMLARKVERMMLIRLNRHLL 489
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 3.660e-18 Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 1
Query: 106 RRAAAQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKS-GNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLI 426
RR +RE Y+ E D D F + +W R D + + G V +PA P++ IARLHLG++ATSCQAERNFSAL ++ +LR N P +VE+ + +RLN+ ++
Sbjct: 397 RRVLIEREMLVYLAEQPQLDVDG-FNLIGFWNRRGTDSVRAATGQVTSPADMPYLAFIARLHLGIEATSCQAERNFSALAHLIGNLRCNMLPHRVERMMLIRLNRRML 503
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.070e-16 Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 43 RLAQNAKIARPNTASSAVRETRRAA-AQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRD 453
RLA++ + A +AV RR A +RE Y+ E + + F+ LE+W+ R+ V P PH+ LIARL G+++TSCQAERNFSAL ++ LR++ P KVE+ +FLRLN+ IP + KAL D
Sbjct: 341 RLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEE-EYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEV-KALHD 475
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.220e-16 Identity = 57/138 (41.30%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 43 RLAQNAKIARPNTASSAVRETRRAA-AQREYAEYMKEAALTDTDPTFTALEYWKPRAVDGLDKSGNVVAPARWPHVGLIARLHLGVDATSCQAERNFSALKLIVSDLRANTSPAKVEKTIFLRLNKHLIPGLGKALRD 453
RLA++ + A +AV RR A +RE Y+ E + + F+ LE+W+ R+ V P PH+ LIARL G+++TSCQAERNFSAL ++ LR++ P KVE+ +FLRLN+ IP + KAL D
Sbjct: 669 RLAKSKAASAGRAAPAAVSTARRGAIVERELRMYLAEDPAEE-EYDFSLLEFWQRRSKPRTCAETGEVEPGL-PHLALIARLFHGIESTSCQAERNFSALAFLIGSLRSSMLPGKVERLMFLRLNRLYIPEV-KALHD 803 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig62.163.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig62.163.1 >prot_P-littoralis_Contig62.163.1 ID=prot_P-littoralis_Contig62.163.1|Name=mRNA_P-littoralis_Contig62.163.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=141bp MEKIRLAQNAKIARPNTASSAVRETRRAAAQREYAEYMKEAALTDTDPTFback to top mRNA from alignment at P-littoralis_Contig62:666390..666842+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig62.163.1 ID=mRNA_P-littoralis_Contig62.163.1|Name=mRNA_P-littoralis_Contig62.163.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=453bp|location=Sequence derived from alignment at P-littoralis_Contig62:666390..666842+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig62:666390..666842+ >mRNA_P-littoralis_Contig62.163.1 ID=mRNA_P-littoralis_Contig62.163.1|Name=mRNA_P-littoralis_Contig62.163.1|organism=Pylaiella littoralis U1_48|type=CDS|length=423bp|location=Sequence derived from alignment at P-littoralis_Contig62:666390..666842+ (Pylaiella littoralis U1_48)back to top |