prot_P-littoralis_Contig618.38.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig618.38.3
Unique Nameprot_P-littoralis_Contig618.38.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length53
Homology
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BLAST of mRNA_P-littoralis_Contig618.38.3 vs. uniprot
Match: A0A6H5JLJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLJ6_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.210e-8
Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0 
Query:    1 MSMNQLREMYKTVFGPRGSSGYERVEDLRALFKELHQQGDCSKLFLGGRGGVS 53
            M    L++++K VFG   +SG  R ED  A F+ L   GDCSK FLGGRGGV+
Sbjct:   87 MPAEDLKKLHKVVFGTLSASGLSRKEDYIAKFRALFHDGDCSKQFLGGRGGVA 139
[Close]
BLAST of mRNA_P-littoralis_Contig618.38.3 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 7.800e-8
Identity = 26/53 (49.06%), Postives = 33/53 (62.26%), Query Frame = 0 
Query:    1 MSMNQLREMYKTVFGPRGSSGYERVEDLRALFKELHQQGDCSKLFLGGRGGVS 53
            M    L++++K VFG   +SG  R ED    F+ L   GDCSK FLGGRGGV+
Sbjct:  609 MPAEDLKKLHKVVFGTLSASGLSRKEDYITKFRPLFHDGDCSKQFLGGRGGVA 661
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig618.38.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLJ6_9PHAE2.210e-850.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPP3_9PHAE7.800e-849.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig618contigP-littoralis_Contig618:169171..169648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig618.38.3mRNA_P-littoralis_Contig618.38.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig618 169151..169648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig618.38.3 ID=prot_P-littoralis_Contig618.38.3|Name=mRNA_P-littoralis_Contig618.38.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=53bp
MSMNQLREMYKTVFGPRGSSGYERVEDLRALFKELHQQGDCSKLFLGGRG
GVS
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