mRNA_P-littoralis_Contig616.30.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 107 bits (267), Expect = 7.520e-26 Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPTGRCQPRVMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNPTCTVAF 240
T +TFH FC++F E+YDE++ LPTG +VM +Y+RIGFPG++GS ++TH+ WGMC YNQAR TGK+G PT VAF
Sbjct: 110 TVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPT--VAF 187
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.570e-25 Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPTGRCQPRVMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNPTCTVAF 240
T +TFH FC++F E+YDE++ LPTG +VM +Y+RIGFPG++GS ++TH+ WGMC YNQAR TGK+G PT VAF
Sbjct: 201 TVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPT--VAF 278
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 104 bits (259), Expect = 1.890e-24 Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPTGRCQPRVMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNPT 225
TA ATFH F +F REMY EHI LPTG Q +VM +Y+R+GF G+ GS ++TH+ WGMC YNQAR TGK+G PT
Sbjct: 185 TAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPT 259
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.540e-23 Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPT---GRCQPRVMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNPT 225
T Q FH FCEHF EMYDEHI LP+ G RVMG+YE++GFPG++GS ++TH+ W C YNQ R TGK+G PT
Sbjct: 154 TVQKVFHQFCEHFATEMYDEHIFLPSEENGELD-RVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPT 230
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.170e-21 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPTGRCQP--RVMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNPT 225
T QA FH FC+HF REMYDEHI LP+ + VM +Y+R+GF G++GS ++TH+ W C YN AR TGK+G PT
Sbjct: 152 TVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPT 228
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 3.260e-20 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPTGRCQP--RVMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNPT 225
T Q FH FC+HF REMYDEHI LP+ + VM +Y+R+GF G++GS ++TH+ W C YN AR TGK+G PT
Sbjct: 125 TVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPT 201
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 7.010e-20 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPTGRCQP--RVMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNPT 225
T QA FH FC+HF REMYDEHI LP+ + VM +Y+R+GF G++GS ++TH+ W C YN R TGK+G PT
Sbjct: 152 TVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPT 228
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5KFR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR8_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 9.420e-8 Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 1
Query: 97 VMGKYERIGFPGSIGSANLTHLAWGMCLYNQARYCTGKDGNP 222
VM +Y+R+GF GS+GS ++TH+ W C YN AR TGK+G P
Sbjct: 195 VMEQYDRLGFSGSMGSMDVTHIGWSKCPYNLARSYTGKEGVP 236
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Match: A0A6H5JBL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL1_9PHAE) HSP 1 Score: 50.1 bits (118), Expect = 3.550e-5 Identity = 25/54 (46.30%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 1 TAQATFHSFCEHFVREMYDEHICLPTGRCQP--RVMGKYERIGFPGSIGSANLT 156
T Q FH F +HF REMYDEHI LP+ + VM + +R+GF G++ S +T
Sbjct: 184 TVQTMFHKFRKHFAREMYDEHIYLPSEQNGELDHVMEQCDRLGFLGAMSSMGVT 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig616.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig616.30.1 >prot_P-littoralis_Contig616.30.1 ID=prot_P-littoralis_Contig616.30.1|Name=mRNA_P-littoralis_Contig616.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=81bp TAQATFHSFCEHFVREMYDEHICLPTGRCQPRVMGKYERIGFPGSIGSANback to top mRNA from alignment at P-littoralis_Contig616:150486..150728+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig616.30.1 ID=mRNA_P-littoralis_Contig616.30.1|Name=mRNA_P-littoralis_Contig616.30.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=243bp|location=Sequence derived from alignment at P-littoralis_Contig616:150486..150728+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig616:150486..150728+ >mRNA_P-littoralis_Contig616.30.1 ID=mRNA_P-littoralis_Contig616.30.1|Name=mRNA_P-littoralis_Contig616.30.1|organism=Pylaiella littoralis U1_48|type=CDS|length=243bp|location=Sequence derived from alignment at P-littoralis_Contig616:150486..150728+ (Pylaiella littoralis U1_48)back to top |