prot_P-littoralis_Contig614.15.1 (polypeptide) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A813H1J7_POLGL (UV excision repair protein RAD23 n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H1J7_POLGL) HSP 1 Score: 57.4 bits (137), Expect = 3.580e-7 Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0
Query: 15 AGGVLDAG-GGRTG-ITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
AGG + G GG G + I LTEEE AAV RLAALGFDK +A +Y NEE+AAN L ++ G+
Sbjct: 332 AGGGMPGGPGGSPGAMQIQLTEEENAAVERLAALGFDKNNAAQAYLACDKNEEMAANFLFDNGGD 396
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: D8TQP4_VOLCA (Ubiquitin receptor RAD23 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQP4_VOLCA) HSP 1 Score: 55.8 bits (133), Expect = 1.210e-6 Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0
Query: 23 GGRTGITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNS 74
GG G+ + LTE++ AA+TRLAALGFD+ L++Y NEE+AAN L +
Sbjct: 312 GGEGGMVVELTEDDEAAITRLAALGFDRNACLEAYLACDKNEEMAANFLAEN 363
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y1UX38_9FUNG (UV excision repair protein RAD23 n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UX38_9FUNG) HSP 1 Score: 55.8 bits (133), Expect = 1.230e-6 Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 27 GITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
G+ I +++EEA A+TRL ALGF+++ +++YF NEELAAN L N++ E
Sbjct: 328 GVPIQISQEEAEAITRLEALGFERSLVIEAYFACDKNEELAANYLFNTQNE 378
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1E7FAG2_9STRA (XPC-binding-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAG2_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 1.270e-6 Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 21 AGGGRTG--ITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGEG 78
AGGG G + LT+EE AAV RLA +GFD+ +A +Y NE LAAN+L++S G+G
Sbjct: 367 AGGGGPGGPQVLRLTQEEMAAVDRLADMGFDRTEAAQAYLACDKNEALAANLLMDSMGDG 426
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y3N2W0_PIRSE (UV excision repair protein RAD23 n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N2W0_PIRSE) HSP 1 Score: 53.9 bits (128), Expect = 2.470e-6 Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query: 28 ITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
+ I +++EEA A+TRL ALGF+++ +++YF NEELAAN L N++ E
Sbjct: 136 VPIQISQEEAEAITRLEALGFERSLVIEAYFACDKNEELAANYLFNTQNE 185
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A8J4CCS9_9CHLO (Ubiquitin receptor RAD23 n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4CCS9_9CHLO) HSP 1 Score: 54.3 bits (129), Expect = 4.260e-6 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query: 27 GITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNS 74
G+ + LTEE+ AA+TRLAALGFD+ L++Y NEE+AAN L +
Sbjct: 336 GMVVELTEEDEAAITRLAALGFDRTACLEAYLACDKNEEMAANFLAEN 383
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO) HSP 1 Score: 53.9 bits (128), Expect = 5.940e-6 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
Query: 1 MRPYQFRLAMRTVNAGGVLDAGGGRTGITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGEG 78
M P Q + M + G + GG+ + LTEEE AAV RL +GFD+++A ++ NE LAAN+L++S G+G
Sbjct: 326 MPPEQLQQFMAHMGGG---EGHGGQQ--VLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 398
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC) HSP 1 Score: 53.9 bits (128), Expect = 5.960e-6 Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query: 30 IHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGEG 78
+ LTEEE AAV RLA +GFD+++A ++ NE LAAN+L++S G+G
Sbjct: 359 LRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 407
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y2AC25_9FUNG (UV excision repair protein RAD23 n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2AC25_9FUNG) HSP 1 Score: 53.1 bits (126), Expect = 1.090e-5 Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 0
Query: 22 GGGRTGITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
GGG + I +++EEA A++RL ALGF+++ +++YF NEELAAN L N++ E
Sbjct: 342 GGGA--VPIQISQEEAEAISRLEALGFERSLVIEAYFACDKNEELAANYLFNTQNE 395
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y1UUG4_9TREE (UV excision repair protein RAD23 n=1 Tax=Kockovaella imperatae TaxID=4999 RepID=A0A1Y1UUG4_9TREE) HSP 1 Score: 52.8 bits (125), Expect = 1.500e-5 Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0
Query: 30 IHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
I+LT+EEAAAV RL ALGFD+A L +Y NEELAAN L + E
Sbjct: 374 INLTQEEAAAVERLEALGFDRAMVLQAYMACDKNEELAANFLFENGDE 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig614.15.1 ID=prot_P-littoralis_Contig614.15.1|Name=mRNA_P-littoralis_Contig614.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=120bpback to top |