prot_P-littoralis_Contig614.15.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig614.15.1
Unique Nameprot_P-littoralis_Contig614.15.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length120
Homology
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A813H1J7_POLGL (UV excision repair protein RAD23 n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H1J7_POLGL)

HSP 1 Score: 57.4 bits (137), Expect = 3.580e-7
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0
Query:   15 AGGVLDAG-GGRTG-ITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
            AGG +  G GG  G + I LTEEE AAV RLAALGFDK +A  +Y     NEE+AAN L ++ G+
Sbjct:  332 AGGGMPGGPGGSPGAMQIQLTEEENAAVERLAALGFDKNNAAQAYLACDKNEEMAANFLFDNGGD 396          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: D8TQP4_VOLCA (Ubiquitin receptor RAD23 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQP4_VOLCA)

HSP 1 Score: 55.8 bits (133), Expect = 1.210e-6
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   23 GGRTGITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNS 74
            GG  G+ + LTE++ AA+TRLAALGFD+   L++Y     NEE+AAN L  +
Sbjct:  312 GGEGGMVVELTEDDEAAITRLAALGFDRNACLEAYLACDKNEEMAANFLAEN 363          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y1UX38_9FUNG (UV excision repair protein RAD23 n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UX38_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 1.230e-6
Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 0
Query:   27 GITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
            G+ I +++EEA A+TRL ALGF+++  +++YF    NEELAAN L N++ E
Sbjct:  328 GVPIQISQEEAEAITRLEALGFERSLVIEAYFACDKNEELAANYLFNTQNE 378          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1E7FAG2_9STRA (XPC-binding-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAG2_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.270e-6
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   21 AGGGRTG--ITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGEG 78
            AGGG  G    + LT+EE AAV RLA +GFD+ +A  +Y     NE LAAN+L++S G+G
Sbjct:  367 AGGGGPGGPQVLRLTQEEMAAVDRLADMGFDRTEAAQAYLACDKNEALAANLLMDSMGDG 426          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y3N2W0_PIRSE (UV excision repair protein RAD23 n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N2W0_PIRSE)

HSP 1 Score: 53.9 bits (128), Expect = 2.470e-6
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   28 ITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
            + I +++EEA A+TRL ALGF+++  +++YF    NEELAAN L N++ E
Sbjct:  136 VPIQISQEEAEAITRLEALGFERSLVIEAYFACDKNEELAANYLFNTQNE 185          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A8J4CCS9_9CHLO (Ubiquitin receptor RAD23 n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4CCS9_9CHLO)

HSP 1 Score: 54.3 bits (129), Expect = 4.260e-6
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   27 GITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNS 74
            G+ + LTEE+ AA+TRLAALGFD+   L++Y     NEE+AAN L  +
Sbjct:  336 GMVVELTEEDEAAITRLAALGFDRTACLEAYLACDKNEEMAANFLAEN 383          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO)

HSP 1 Score: 53.9 bits (128), Expect = 5.940e-6
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
Query:    1 MRPYQFRLAMRTVNAGGVLDAGGGRTGITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGEG 78
            M P Q +  M  +  G   +  GG+    + LTEEE AAV RL  +GFD+++A  ++     NE LAAN+L++S G+G
Sbjct:  326 MPPEQLQQFMAHMGGG---EGHGGQQ--VLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 398          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC)

HSP 1 Score: 53.9 bits (128), Expect = 5.960e-6
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   30 IHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGEG 78
            + LTEEE AAV RLA +GFD+++A  ++     NE LAAN+L++S G+G
Sbjct:  359 LRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDG 407          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y2AC25_9FUNG (UV excision repair protein RAD23 n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2AC25_9FUNG)

HSP 1 Score: 53.1 bits (126), Expect = 1.090e-5
Identity = 26/56 (46.43%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   22 GGGRTGITIHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
            GGG   + I +++EEA A++RL ALGF+++  +++YF    NEELAAN L N++ E
Sbjct:  342 GGGA--VPIQISQEEAEAISRLEALGFERSLVIEAYFACDKNEELAANYLFNTQNE 395          
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Match: A0A1Y1UUG4_9TREE (UV excision repair protein RAD23 n=1 Tax=Kockovaella imperatae TaxID=4999 RepID=A0A1Y1UUG4_9TREE)

HSP 1 Score: 52.8 bits (125), Expect = 1.500e-5
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0
Query:   30 IHLTEEEAAAVTRLAALGFDKADALDSYFEYGTNEELAANVLLNSKGE 77
            I+LT+EEAAAV RL ALGFD+A  L +Y     NEELAAN L  +  E
Sbjct:  374 INLTQEEAAAVERLEALGFDRAMVLQAYMACDKNEELAANFLFENGDE 421          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig614.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A813H1J7_POLGL3.580e-753.85UV excision repair protein RAD23 n=1 Tax=Polarella... [more]
D8TQP4_VOLCA1.210e-650.00Ubiquitin receptor RAD23 n=1 Tax=Volvox carteri f.... [more]
A0A1Y1UX38_9FUNG1.230e-649.02UV excision repair protein RAD23 n=1 Tax=Piromyces... [more]
A0A1E7FAG2_9STRA1.270e-650.00XPC-binding-domain-containing protein n=1 Tax=Frag... [more]
A0A1Y3N2W0_PIRSE2.470e-648.00UV excision repair protein RAD23 n=1 Tax=Piromyces... [more]
A0A8J4CCS9_9CHLO4.260e-652.08Ubiquitin receptor RAD23 n=2 Tax=Volvox TaxID=3066... [more]
A0A1Z5KBW7_FISSO5.940e-639.74UV excision repair protein RAD23 n=2 Tax=Fistulife... [more]
B7FSN5_PHATC5.960e-651.02RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850... [more]
A0A1Y2AC25_9FUNG1.090e-546.43UV excision repair protein RAD23 n=1 Tax=Neocallim... [more]
A0A1Y1UUG4_9TREE1.500e-558.33UV excision repair protein RAD23 n=1 Tax=Kockovael... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004806UV excision repair protein Rad23PRINTSPR01839RAD23PROTEINcoord: 47..61
score: 31.21
coord: 30..46
score: 44.12
coord: 62..77
score: 53.98
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 35..71
e-value: 1.6E-5
score: 24.7
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 32..74
score: 11.293844
NoneNo IPR availableGENE3D1.10.8.10coord: 27..75
e-value: 1.4E-13
score: 52.6
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 26..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig614contigP-littoralis_Contig614:62748..63351 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig614.15.1mRNA_P-littoralis_Contig614.15.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig614 62748..63358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig614.15.1 ID=prot_P-littoralis_Contig614.15.1|Name=mRNA_P-littoralis_Contig614.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=120bp
MRPYQFRLAMRTVNAGGVLDAGGGRTGITIHLTEEEAAAVTRLAALGFDK
ADALDSYFEYGTNEELAANVLLNSKGEGIQACAQATPTEADNPEDRSYGV
ERRNVVRLTTEASAAVTRLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004806Rad23
IPR015940UBA
IPR009060UBA-like_sf