prot_P-littoralis_Contig610.23.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig610.23.1
Unique Nameprot_P-littoralis_Contig610.23.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length220
Homology
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: D7FIR0_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR0_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 1.000e-138
Identity = 203/222 (91.44%), Postives = 211/222 (95.05%), Query Frame = 0
Query:    1 MKTACAM---VVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            MKTACAM   V ACAA ASAFVAPSAFKGA+LTAAKPASSSMKMSFE+EIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAML +LGHITAQNFRFPGMLAPSA LSFADCPNG+AA+SKIPLYGL+QIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWE+WTEEEQ  KRAIELNNGRAAQMG+L LMVHEQINNTPYVINEILGSHV FN
Sbjct:    1 MKTACAMAAGVAACAATASAFVAPSAFKGASLTAAKPASSSMKMSFETEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLAILGHITAQNFRFPGMLAPSADLSFADCPNGLAAISKIPLYGLIQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWESWTEEEQATKRAIELNNGRAAQMGILGLMVHEQINNTPYVINEILGSHVQFN 222          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 1.550e-95
Identity = 151/220 (68.64%), Postives = 176/220 (80.00%), Query Frame = 0
Query:    1 MKTACAMVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            MK+AC M +ACAA A+AFVAPSAF GAA+     +SS+MKMSFESEIGAQ P+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF F+GFLE  VM   EGSFPGD +   NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PY+IN++LG+  TFN
Sbjct:    1 MKSAC-MALACAASANAFVAPSAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 278 bits (711), Expect = 3.320e-92
Identity = 150/214 (70.09%), Postives = 170/214 (79.44%), Query Frame = 0
Query:    7 MVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            M VACAA A  F  PSAF GAALT +  A S+MKMSFESEIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN+++G+  TFN
Sbjct:    6 MAVACAA-APGFRGPSAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 2.790e-87
Identity = 137/199 (68.84%), Postives = 159/199 (79.90%), Query Frame = 0
Query:   22 SAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            SAF GAA+  +  +SS+MKMSFESEIGAQ P+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF F+GFLE  VM   EGSFPGD +   NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+  TFN
Sbjct:   24 SAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 264 bits (674), Expect = 1.350e-86
Identity = 138/200 (69.00%), Postives = 160/200 (80.00%), Query Frame = 0
Query:   21 PSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            PSAF GAALT +  +SS+MKMSFESEIGAQAP+G+WDPLGLL +D  Q+ F+RLRYVE+K GRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A + E Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+   FN
Sbjct:   18 PSAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLL-EDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 261 bits (668), Expect = 9.350e-86
Identity = 134/200 (67.00%), Postives = 158/200 (79.00%), Query Frame = 0
Query:   21 PSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            PSAF GAAL+    +SS+MKMSFESEIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD  +  NPF   W++ + E Q +KRAIELNNGRAAQMG+L +MVHE+++N PY+ N++LG+  TFN
Sbjct:   13 PSAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.440e-85
Identity = 138/198 (69.70%), Postives = 159/198 (80.30%), Query Frame = 0
Query:   23 AFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            AF GAA+     +SS+MKMSFESEIGAQ P+G+WDPLGLL +D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+  TFN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLL-EDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: D7FKU4_ECTSI (Chlorophyll binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU4_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 2.010e-84
Identity = 136/216 (62.96%), Postives = 167/216 (77.31%), Query Frame = 0
Query:    1 MKTACAMVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHV 216
            MK   AM+ ACAAGA+AFVAPSAF GAA+     +SS+MKMSFE+E+GAQ P+G+WDPL  L +D  QERFDRLRYVEIKHGRI ML +LGHIT +N R PG L  +    FAD PNG+ A+SK+  +G+ QI  FIGFLE  VM QKEGSFPGDMS INPFEK+WE++ EE +  KRAIELNNGRAAQMG+ AL++HE ++  PY+IN+I+G  +
Sbjct:    1 MKCTIAMLAACAAGANAFVAPSAFNGAAVATRAQSSSAMKMSFENELGAQPPLGFWDPLYWL-EDADQERFDRLRYVEIKHGRICMLAILGHITQENVRLPGNL--NFETPFADMPNGLTAISKMGPFGVAQIVAFIGFLELFVMKQKEGSFPGDMSRINPFEKQWESFDEETKLRKRAIELNNGRAAQMGIFALVIHEILDGEPYIINKIVGDTI 213          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 3.220e-84
Identity = 130/182 (71.43%), Postives = 148/182 (81.32%), Query Frame = 0
Query:   39 MKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            MKMSFESEIGAQ P+G+WDPLGLL +D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+   FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLL-EDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181          
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 256 bits (653), Expect = 6.710e-84
Identity = 130/182 (71.43%), Postives = 147/182 (80.77%), Query Frame = 0
Query:   39 MKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 219
            MKMSFE EIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+   FN
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIR0_ECTSI1.000e-13891.44Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A6H5KCX6_9PHAE1.550e-9568.64LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
FCPB_MACPY3.320e-9270.09Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JHT6_9PHAE2.790e-8768.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
FCPC_MACPY1.350e-8669.00Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
FCPF_MACPY9.350e-8667.00Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
D8LNK6_ECTSI1.440e-8569.70Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7FKU4_ECTSI2.010e-8462.96Chlorophyll binding protein n=2 Tax=Ectocarpus Tax... [more]
A0A6H5JDS8_9PHAE3.220e-8471.43LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPD_MACPY6.710e-8471.43Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 41..215
e-value: 9.4E-30
score: 105.8
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 13..209
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 35..209
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 47..199
e-value: 3.1E-30
score: 105.8
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 13..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig610contigP-littoralis_Contig610:79009..85185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig610.23.1mRNA_P-littoralis_Contig610.23.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig610 78038..85238 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig610.23.1 ID=prot_P-littoralis_Contig610.23.1|Name=mRNA_P-littoralis_Contig610.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=220bp
MKTACAMVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQ
APIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRF
PGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEG
SFPGDMSLINPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQ
INNTPYVINEILGSHVTFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln