mRNA_P-littoralis_Contig610.23.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig610.23.1
Unique NamemRNA_P-littoralis_Contig610.23.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: D7FIR0_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR0_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 1.460e-134
Identity = 203/222 (91.44%), Postives = 211/222 (95.05%), Query Frame = 3 
Query:   54 MKTACAM---VVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            MKTACAM   V ACAA ASAFVAPSAFKGA+LTAAKPASSSMKMSFE+EIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAML +LGHITAQNFRFPGMLAPSA LSFADCPNG+AA+SKIPLYGL+QIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWE+WTEEEQ  KRAIELNNGRAAQMG+L LMVHEQINNTPYVINEILGSHV FN
Sbjct:    1 MKTACAMAAGVAACAATASAFVAPSAFKGASLTAAKPASSSMKMSFETEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLAILGHITAQNFRFPGMLAPSADLSFADCPNGLAAISKIPLYGLIQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWESWTEEEQATKRAIELNNGRAAQMGILGLMVHEQINNTPYVINEILGSHVQFN 222
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BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.100e-91
Identity = 151/220 (68.64%), Postives = 176/220 (80.00%), Query Frame = 3 
Query:   54 MKTACAMVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            MK+AC M +ACAA A+AFVAPSAF GAA+     +SS+MKMSFESEIGAQ P+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF F+GFLE  VM   EGSFPGD +   NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PY+IN++LG+  TFN
Sbjct:    1 MKSAC-MALACAASANAFVAPSAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218
[Close]
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 281 bits (718), Expect = 2.100e-88
Identity = 153/220 (69.55%), Postives = 174/220 (79.09%), Query Frame = 3 
Query:   54 MKTACAMVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            MK+A  M VACAA A  F  PSAF GAALT +  A S+MKMSFESEIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN+++G+  TFN
Sbjct:    1 MKSAV-MAVACAA-APGFRGPSAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217
[Close]
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.630e-82
Identity = 137/199 (68.84%), Postives = 159/199 (79.90%), Query Frame = 3 
Query:  117 SAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            SAF GAA+  +  +SS+MKMSFESEIGAQ P+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF F+GFLE  VM   EGSFPGD +   NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+  TFN
Sbjct:   24 SAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221
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BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 265 bits (678), Expect = 1.940e-82
Identity = 141/213 (66.20%), Postives = 166/213 (77.93%), Query Frame = 3 
Query:   75 VVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            ++A A+ A     PSAF GAALT +  +SS+MKMSFESEIGAQAP+G+WDPLGLL +D  Q+ F+RLRYVE+K GRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A + E Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+   FN
Sbjct:    5 IMAVASAAPGLRGPSAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLL-EDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216
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BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 263 bits (672), Expect = 1.290e-81
Identity = 139/212 (65.57%), Postives = 164/212 (77.36%), Query Frame = 3 
Query:   78 VACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            +ACAA A     PSAF GAAL+    +SS+MKMSFESEIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD  +  NPF   W++ + E Q +KRAIELNNGRAAQMG+L +MVHE+++N PY+ N++LG+  TFN
Sbjct:    2 IACAA-APGLRGPSAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211
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BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: D7FKU4_ECTSI (Chlorophyll binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU4_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 6.670e-81
Identity = 136/216 (62.96%), Postives = 167/216 (77.31%), Query Frame = 3 
Query:   54 MKTACAMVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLINPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHV 701
            MK   AM+ ACAAGA+AFVAPSAF GAA+     +SS+MKMSFE+E+GAQ P+G+WDPL  L +D  QERFDRLRYVEIKHGRI ML +LGHIT +N R PG L  +    FAD PNG+ A+SK+  +G+ QI  FIGFLE  VM QKEGSFPGDMS INPFEK+WE++ EE +  KRAIELNNGRAAQMG+ AL++HE ++  PY+IN+I+G  +
Sbjct:    1 MKCTIAMLAACAAGANAFVAPSAFNGAAVATRAQSSSAMKMSFENELGAQPPLGFWDPLYWL-EDADQERFDRLRYVEIKHGRICMLAILGHITQENVRLPGNL--NFETPFADMPNGLTAISKMGPFGVAQIVAFIGFLELFVMKQKEGSFPGDMSRINPFEKQWESFDEETKLRKRAIELNNGRAAQMGIFALVIHEILDGEPYIINKIVGDTI 213
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BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 8.600e-81
Identity = 138/198 (69.70%), Postives = 159/198 (80.30%), Query Frame = 3 
Query:  120 AFKGAALTAAKPASSSMKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            AF GAA+     +SS+MKMSFESEIGAQ P+G+WDPLGLL +D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+  TFN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLL-EDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377
[Close]
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 1.610e-79
Identity = 130/182 (71.43%), Postives = 148/182 (81.32%), Query Frame = 3 
Query:  168 MKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            MKMSFESEIGAQ P+G+WDPLGLL +D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+   FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLL-EDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181
[Close]
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 256 bits (653), Expect = 3.320e-79
Identity = 130/182 (71.43%), Postives = 147/182 (80.77%), Query Frame = 3 
Query:  168 MKMSFESEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRFPGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQINNTPYVINEILGSHVTFN 710
            MKMSFE EIGAQAP+G+WDPLGLL  D  QERF+RLRYVE+KHGRIAML + GH+T QN R PGML+ SA LSFAD PNGVAALSKIP  GL QIF FIGFLE  VM   EGSFPGD +L  NPF   W+A +EE Q +KRAIELNNGRAAQMG+LALMVHE++NN PYVIN++LG+   FN
Sbjct:    2 MKMSFELEIGAQAPLGFWDPLGLLA-DADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig610.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIR0_ECTSI1.460e-13491.44Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A6H5KCX6_9PHAE1.100e-9168.64LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
FCPB_MACPY2.100e-8869.55Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JHT6_9PHAE1.630e-8268.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
FCPC_MACPY1.940e-8266.20Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
FCPF_MACPY1.290e-8165.57Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
D7FKU4_ECTSI6.670e-8162.96Chlorophyll binding protein n=2 Tax=Ectocarpus Tax... [more]
D8LNK6_ECTSI8.600e-8169.70Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JDS8_9PHAE1.610e-7971.43LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPD_MACPY3.320e-7971.43Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig610contigP-littoralis_Contig610:78038..85238 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIR0
PFAMsChloroa_b-bind
Model size1684
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorychloroplast
Exons4
Evalue1.65e-139
EggNOG OGs2CDPH@1|root,2S3EU@2759|Eukaryota
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-20_003280.1
DescriptionChlorophyll A-B binding protein
Cds size660
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig610.23.1prot_P-littoralis_Contig610.23.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig610 79009..85185 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791274.336231-UTR-P-littoralis_Contig610:78037..790081680791274.336231-UTR-P-littoralis_Contig610:78037..79008Pylaiella littoralis U1_48UTRP-littoralis_Contig610 78038..79008 -
1680791274.3993723-UTR-P-littoralis_Contig610:85185..852381680791274.3993723-UTR-P-littoralis_Contig610:85185..85238Pylaiella littoralis U1_48UTRP-littoralis_Contig610 85186..85238 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791274.3511124-CDS-P-littoralis_Contig610:79008..792391680791274.3511124-CDS-P-littoralis_Contig610:79008..79239Pylaiella littoralis U1_48CDSP-littoralis_Contig610 79009..79239 -
1680791274.361537-CDS-P-littoralis_Contig610:79596..798211680791274.361537-CDS-P-littoralis_Contig610:79596..79821Pylaiella littoralis U1_48CDSP-littoralis_Contig610 79597..79821 -
1680791274.3766627-CDS-P-littoralis_Contig610:80649..807881680791274.3766627-CDS-P-littoralis_Contig610:80649..80788Pylaiella littoralis U1_48CDSP-littoralis_Contig610 80650..80788 -
1680791274.3878407-CDS-P-littoralis_Contig610:85120..851851680791274.3878407-CDS-P-littoralis_Contig610:85120..85185Pylaiella littoralis U1_48CDSP-littoralis_Contig610 85121..85185 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig610.23.1

>prot_P-littoralis_Contig610.23.1 ID=prot_P-littoralis_Contig610.23.1|Name=mRNA_P-littoralis_Contig610.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=220bp
MKTACAMVVACAAGASAFVAPSAFKGAALTAAKPASSSMKMSFESEIGAQ
APIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLGVLGHITAQNFRF
PGMLAPSAGLSFADCPNGVAALSKIPLYGLVQIFLFIGFLETKVMLQKEG
SFPGDMSLINPFEKEWEAWTEEEQNNKRAIELNNGRAAQMGLLALMVHEQ
INNTPYVINEILGSHVTFN*
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mRNA from alignment at P-littoralis_Contig610:78038..85238-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig610.23.1 ID=mRNA_P-littoralis_Contig610.23.1|Name=mRNA_P-littoralis_Contig610.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7201bp|location=Sequence derived from alignment at P-littoralis_Contig610:78038..85238- (Pylaiella littoralis U1_48)
CCTCCATCCCAAGCATCAAAGCAGACTTCAACTCGAAACCACAGAGAGAA
AACATGAAGACCGCTTGTGCTATGGTTGTGGCGTGCGCTGCCGGCGCCTC
TGCCTTCGTGGCACCCAGGTGAGCTCTTTTTTTCGGCTTCATGAACAAAG
CTTGGTGTAGGCTGTTATGGGCCTCTCTTCCACCTCGTGTCCTGCCTCTG
ATTCTGATGTCCCTCCCACAGGCGCTTTGGTTTATCACACCTCTGGTACG
TTGTCCACACGTGCCACGTCAGTTGTACTTCGCAACATCCAGAGACAGGG
GCCGTGTGAAGGGTGGCTGCGGTAGTGTAAGCAACCAGGCAAGCAGGAAC
TGCTCATAGTCGCAGTGTGCATGAACAGCCGGCACGCGGCACGCGAGCAC
ATGAGGCGCTCTCCCAGCCATCTCTCTGAATTTTGTCTCACAAGACGCTA
ACAGAGCGCGCGCGCACGTCGAATAAAAACATGAACGATCAGACCCTGAA
GACGAGCTAGATCCGATGGCAAGGCTGTTATGATACTCACGGTGCCGTGC
TGTGGCGTTTCAAGGCATCCAAGCCTTCCTCGAAGCCACAAGTGGATGGC
AGACATGTGATGTGTCCGTACAAACCAAAGCCCTCACACAGCACTACCCG
TCCCATCGAAATAAACCGCTTTTTTATTGTCCTGAGATCAATCTAGCGTC
GGGGTCTTGTTCTCAACCCCGATACTTTCGTCATGATACTTTCGTCATGA
TGGAAGGATTTACTCCTGTTTTTTGCACAAAGATGATGAATACCACATGA
TACCCGTAAGCGTCACCACATGAATGCACAGGTACAACAATTTGTCGGCA
GTGCAGCAAGCACCATGCCCTGCGTGTTCGTATCGATGTGTGTTTGGCGC
GTTGCAGCTGCGTTCCCATATGCTTCTCCGCCCCGCTTTTTATCGATGTT
TTGGCCCTCTCGAAGCGCTTTCCCGGGATTCGCCCCCACACGTTTTTCTC
TTCGAGTCATACAAAAACACATGAACTTCGTACTACGGAGTACTTCGTAT
GATACATAACAGGACAGGCTTCGATGACCAGAGCACCAAATCATGACATG
TGCGGGTATTATAACCCCGTATATAACTATTTACCACCAGGCCCACAGGT
GCAACAATGGCGCCCGTTGGGACGTTGACGCACACCACAGCATTTATACC
TTGGCACCACAGCAGCTTACACTTACTTGGGAGTGCTCACCTACAAGCGT
ACACATCACAAGTGTGTGTGTGTTTTGTCATCCCATATTCTCTGGCACAC
TACGTAGTCTGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGACGG
GGTCACACAGGAGGAAGGTCAACACGGGAGGAGTTACCCCCACCTTCCTT
CTGCGGTACATGCGTGAGATTTTTTCTCGCGAGCAGGGATCCGCGTTCTT
CTTAGCCTCGTCAGCGAAGCCGAATCTGCTTTTACTAACAGCATAGCCGC
TTTCAAAGCAGCAAAGGAACACATTCACCGGGAATCGAACCCCCGTTCCT
CTGCATCAAGTCGTTAACGAGGGGACCACTAGTCCACCGGGGCGACCAAG
TGTAGGTACCTTTGTGTAAGTACATTTCGTACACGTACGCCAGTGCTCTG
AAAATGACGCAAGATATGACCCCCTCCAACTGACTCGCTGACAACACCTC
CGTAAAGAATGTACCAGGTACCAGGTATTATACTCCGTATTATAAATCAT
ACCTGTTCTCCTCACAAGTAAAGGAGTACTTCGTACTGGCATACAAGCAC
TTTACTTGCCTTTCCACCAGGATGGTATGATACAATGCCGGTAGCAGATG
ACCTCTCGCTCGGGAGATGCCGCCAGGTGTGCCGTCCGTTGGAACGTCTG
TTTCAAATATCTTTTGACCTGAAATAGAGCTTTGGTCAAACCGTTTTTCT
GGTGTTGTACTGCTCCACTTCCTGTGCGAGTGAGCCATGATACCGACACG
AAGTAGAAGTATAGAAGTAAAATCGGTGAAATACAGCAGAAGCGTCTTCC
CCTCGCTGCCGGCGAGAAAAATGTCAACACTGCTGCTGTATCGCACCTGG
TCAATGCACGACACTCCACAACGGGCTGCGATGGACCTCGACCTCCTTGT
AATTATGCACATATCATACCAGAGTTGTGCCGTGTGTCGTTTCACAAGTT
TCATCGCACACGAAGTACTGTAGAACACATCATGCCCTTGGGCGTTATGT
CTACGCGCGACACGCTGTATCTGTAACGTAGTTCGAAATATCGAACCTAT
CACAGCGAATTCCCTTGCTGTCTCCGCAATTCCGCTGATGCAGGACCTGC
CCTGCCGGCCTGTTTAATATCAACTCATCCTGCGTACTTTTTGTTATGCA
TCTTAAACGAAAACCGGTTGCAACGTTGTTGGAAGTCTCACTTTTGCTGT
ACAGCAGTATTGGTTTGTGAACATTCCTGGAGCGTGGTCGCAAAAAATGT
GTTTAATGTATAGCAGTAGCAGTGTGCATACTGCTGCTAGGTCGTTTCAA
GTATGTACTCGTCATATCATACGAAGGACTCGAACACGTAAGGCCCTTCC
GCATTATTATCCTTGCACTGCTCTTTATAATACAAGATGAATTAACTTTA
ACGGAAGCACTCGCTGTGTCCACAAGAGGGTTTTGTTGGCATGTCCATTT
TTAGACCCTATTCCATCATTTACTTCAGCGTAGAAAAGCCGGATGCGTCA
CGTTTGCAGAACAGCCGTATTATATACTCGGAGCACCAAGCATCGACGAG
GGATAGGGATTGCTGTCCCCTTTCTCGCGATAAAAGCTCAACCAAAAAGG
CAAGCACCGCAGAGGGAAGTGGAGAAAAAAAAACTCCTGTGTTGACTTCC
CCCTGTGTGACCCCGGTTGGAGCGTCTACCTACCCGAAAGGTGTAGAGTG
GCGTCTAATGAAAGGGATGACAACACACACACACCAAGCAGCGGCACGTG
CCCTTCAAGCCAAACGTTCGAGAACCATATCAGTGCATCCTCGCACGAGT
GGCGTGAAGTCGCTGCCTCCAACTGCAGTACCGCTCTTTTGGGTAACCAT
CGTTTATTCTCTCTTCAATTTTTCTCCCAGCACGGTATGTGCCGGGTTTG
TGACAACGGGCTAGACTAGCGCTGTTGAGTACCTGTTTCAGCGTTTGGTC
TGGTGAAGACAAAAAGTGTCAACAACTCTGAAACACTCCACATTTATGTA
CCGGGCTTGCCGGTGAACAATGTTCACGTGCGTACACTGCCCTCTCGTTT
GATAAAGCTCGATAAATCCTGGTGCAGTCGAAGTCCAAGTTCGGTCGTGA
GTAGAGAACGAGGGCGGGTAAATACATTTGCAACCGTCTCGACTTGGCAA
AAGCACGATTTATCATGCTGTGGGCGCGGGGTTCCAACCGAACATCGTAT
TCATTTTACACAGTATCTCTGAAATCCCATGATGTATAGCGAACGAGAGA
GGTGCGTTTCTCAACGAGTGCCGGCCTGACACCGCCGTCCTGATCCTGAA
GTGTTTCTTATTGTGCAGGATAGGTCTTGGCAAGATATCGTGAACCATGC
TGCTCGCGCTTTTCGATTAGGTAATCAGTGTCGACAGAGCACTGTCCTTC
CCCGCTGGCGAGTGAAATAATTTAAGCTGTCGGCTTTTGTCGGGGAGAAT
GCTGGTCCTCTCCGGTGATGCACCTTGCTCTCTGGAGAGAACAGCTCGAC
TGCCTACCCATTGAGGCAACCTGGATAAACAGCCCTGTCGACTGATGGGC
AGCTCAGCAGCTGGTGTCAAATTTGTCTACGGTCTTCTTTCAGCTGTTTG
ATATGATGATGTTACGATTTCATCGATTCTCGCACGAAGGGCTGAAGTCA
TCCCACCAGAGAGATTCGGATTTTGTATGTACAATATGTGCGGAGATTGT
TTCCAGACAGGAAAACGATGGTACTCTGCGACTCAAAGCGCCATCGTCAC
ACGGCCGACACTTTTTTTTTGTGAATGTTTCTTCGCACTCCTGTGACAGA
GCACCCCTCCCCGCCCGCTGCAGCACACGATGACTGGTGCACTTGGCCAA
AAGTATAGCCCCAGAGCGTGACTCAAGAGCTCACGCTACTGTCTTTCACC
CGCCTCTGGATCCTTTTGCCGCTCGAGTTTTGGTTGGCACCGTCATTAAA
GGCGAATAACACGGCGTAAGATTTCGTTTGATGGGGTGGTGACCGTCGAT
AGCTTTGCTGGCGAAACTTTTGGCCATTGACAAACTGTTTCTTTTTTTTT
CCCGACAACCCTCAACTGCGTTTTAAAAACTTGAACGACAAACGAAGTTC
AAATGTAGATCACTGTTTTTCCCATACTCATGTTCTGACCTCTTTTCTTT
TGGCCCGACGTGCTTTCCTGTACCTGTACCCGTCTCGTGTTGTTTTCCAG
CGCCTTCAAGGGAGCCGCATTGACCGCCGCAAAGCCCGCTTCCTCGTCGA
TGAAGATGTCGTTCGAGTCGGAGATTGGCGCCCAGGCACCCATCGGCTAC
TGGGATCCCCTTGGCCTCCTCACCAAGGACCCCTCGCAGGTGAGCGTTGC
GGCGCAGATGTGTTGCACCGGAGGGTGGTTAGTGGTCAGTTTCGCTGTTT
AGGGCGCAACACCTTCCTGCCTGTTGCCTTGCTATCGGTTCAGAGCCACC
TCTTGGTGGCGATGACTATGATCTGGGGTTCTTGCATACCGTTGTTTGCA
TATTCTCGAGTCCACGAGCAAACAATTCCGTAAACCGTCGGAGGCAATTA
CAGTCCTGGCGCCCGGTTGCCTCGCCGCCCCCACCCACCACTCATTTCGA
GACTCGTTGAATCCCGTCCAGTTTCTTGATTCTTGAGCACCAATATTCAA
GCGCTTCTCGCTGTCTCATCGCCCACGGGCATCCAGCCTCAACGCAAACC
AAATAAATGTTTGTTTCATCGTGTTGCGCGTCCGCGGAGAGGGCTAGAAG
TGGGGAGGAGTGTGAAGATAAAATGCGTATCCGAAGCTCATTGCCACCGC
CGCGCCTTTTACAAGTAAAGGCTACGTTAAACGAAGCGCGCGGCAAACTA
TCCGCACGCGCCTCGTAGGGATGTGGTCTTTTATCTATTGAGTAATTGCC
AACAATTTTTGGATAGACAGAAACATCTCAAGACACTTTTTTGAGTGAGG
CTTCACCTTCCGGGTTCGTATTTTGAAGGAAAAATCGCATCAAACAGAGC
GCATATCCTGAGATGAGAGGTTTGCAGGATCGGTGGACACCGCACAGGCA
CCGACGCGCGTGTCGCATTAAATTTGATACACTTCATTGTGCTCATATCC
ATCCCGTTTCCGAATTTCTGTTCTCACGCCCATCTCGTTTCCCGAACGCT
TCTTCCACTCTCTGTAGGAGCGCTTCGACCGCCTCCGGTACGTGGAGATC
AAGCACGGCCGCATCGCTATGCTCGGCGTCCTCGGCCACATCACCGCCCA
GAACTTCCGCTTCCCGGGCATGCTCGCCCCCTCCGCGGGCCTCTCGTTCG
CGGACTGCCCCAACGGCGTCGCCGCCCTGTCCAAGATCCCCCTCTACGGC
CTCGTGCAGATCTTCCTTTTCATCGGCTTCCTCGAGACCAAGGTGCGCGC
GGCGGCAGTGTGCGAGTTTTTTACGTTTCGTGTTGTTTCGTTTTTGCTTT
GTCTTTTGCCTGCTCGGCTACGACGGGTTGAAATACGTGCTACCGTCTTA
GAGCCCCAAGTATTCCAAGGTAAAACATACGGGTTGGCGGGTTTCGTCCG
GCACGAAGTGCAGTGAACCAGACAGCAGCTCCCGTTTGTTTTATTTCATG
TTTAGTTGGATCGTTTAGACCACAGGTTGTATCATTCCAGCATAACATGA
AACTTGACCTGACATATTTGTTGATACTTTACTCTACTGTAACTCCTACT
GTTAACTTTTCTTGAACGCTCTACTATTTTGTGTATGGCACATGTACAGG
TTATGTTGCAGAAGGAGGGATCTTTCCCCGGAGACATGTCACTCATCAAC
CCCTTCGAGAAGGAGTGGGAGGCGTGGACTGAGGAGGAGCAGAACAACAA
GCGCGCAATCGAGCTCAACAACGGGCGCGCGGCGCAGATGGGCCTCCTCG
CCCTCATGGTGCACGAGCAGATCAACAACACCCCCTACGTCATCAACGAA
ATCCTCGGCTCGCACGTCACGTTCAACTAAACACAACATATTTTTGCGTG
TGCGTTTTTTTTTAGTCTCGAGAGGAAAAGAAAGTACTACAGGATGAAGA
AAGCGAAAATACCGAATCGCCTCGTGCTTTTATAGGTGATTTGACCCTGC
AGTTGGTAGTTCATCGGCGCAATACGAGGCGGCTTATGGTGTTTTTTCGA
AATACTCTTCCTGCGTCAAAACGGGTTTTAGGGGAGGGGGTGGCACACGT
CGTTCCGTAGACTAGATTTCGGCTAGATTGTATCCACATGGATTTAAAGA
TTTTCCGCTCGGTTGTCCGGTGTAGAAGTGTGCTTGCGATGTAGGGCGTA
TGACGTCGCCCCGGCTTTTTTTGCATAATTAGGACGCTGGGCTTCGCCCC
GCCCCCCCCCCCTCCCTCTCCATGTGCGCGCCGCCACCGACTTTGGTGTC
CATTTGTAAGGCGTTCCTAACAAAGTTGAAACTCGACACATTTTGTACCG
TGCACAGTACCGAGTTTTGAGGATATTACCTAACTCAGGCAAGGACCGAT
TGATTGCACAAGTCGGCATCGGGTATGCCGTCTGTCACGGGAGACCGTGC
TGGTTAAACAAAATCCTCTCAAGGCGCCAACAGTGAAACGCTCGATCGCC
CAATTTGTCGGCGAAGCGTCTCCCGAGTTCCTGCATGCATGCCTTGCCTG
TCCCTGCCGTGGCCAAATGGGCTGTGGCGAAAGCGACTAGAACATTGACA
GCACCCATCCGCGTCAAACTTGATTTCGCTTCAGTTCGTAGCACGTCACG
ATCTCTGGGTGCTCCCCTATCCTGCACGCACAGACGAAGCATTTAATTTC
TTCTCGCAGAAGTCTCGTATTGGACTGAAGTGGCTGGTACTTCGAAGTAC
ACGCCTGCGATCCCCTGCCTGCTTAATAGAAAGTGAATTACGCACCGAAC
GCCAAAGTGTGCTGGAACATTGGTAACGCCGAGGTTAAGTGTTGAAATTC
C
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Coding sequence (CDS) from alignment at P-littoralis_Contig610:78038..85238-

>mRNA_P-littoralis_Contig610.23.1 ID=mRNA_P-littoralis_Contig610.23.1|Name=mRNA_P-littoralis_Contig610.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=660bp|location=Sequence derived from alignment at P-littoralis_Contig610:78038..85238- (Pylaiella littoralis U1_48)
ATGAAGACCGCTTGTGCTATGGTTGTGGCGTGCGCTGCCGGCGCCTCTGC
CTTCGTGGCACCCAGCGCCTTCAAGGGAGCCGCATTGACCGCCGCAAAGC
CCGCTTCCTCGTCGATGAAGATGTCGTTCGAGTCGGAGATTGGCGCCCAG
GCACCCATCGGCTACTGGGATCCCCTTGGCCTCCTCACCAAGGACCCCTC
GCAGGAGCGCTTCGACCGCCTCCGGTACGTGGAGATCAAGCACGGCCGCA
TCGCTATGCTCGGCGTCCTCGGCCACATCACCGCCCAGAACTTCCGCTTC
CCGGGCATGCTCGCCCCCTCCGCGGGCCTCTCGTTCGCGGACTGCCCCAA
CGGCGTCGCCGCCCTGTCCAAGATCCCCCTCTACGGCCTCGTGCAGATCT
TCCTTTTCATCGGCTTCCTCGAGACCAAGGTTATGTTGCAGAAGGAGGGA
TCTTTCCCCGGAGACATGTCACTCATCAACCCCTTCGAGAAGGAGTGGGA
GGCGTGGACTGAGGAGGAGCAGAACAACAAGCGCGCAATCGAGCTCAACA
ACGGGCGCGCGGCGCAGATGGGCCTCCTCGCCCTCATGGTGCACGAGCAG
ATCAACAACACCCCCTACGTCATCAACGAAATCCTCGGCTCGCACGTCAC
GTTCAACTAA
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