prot_P-littoralis_Contig606.30.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig606.30.2
Unique Nameprot_P-littoralis_Contig606.30.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length300
Homology
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 5.390e-102
Identity = 190/298 (63.76%), Postives = 215/298 (72.15%), Query Frame = 0
Query:    1 MPVTRTGPNSGQSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNRGSIEFQGDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXXXGADSFVRFSKTATFEDNAGSFNGATGCAIANDGTAIFRGDAVFSDHDCDEGAXXXXXXXXXXXXXXXXNDNINRNEDGGGLVNRDNVDRGVSGDLVFKAAAQFNRNNAQTGGGLSIYGGSIEFEKGVTFDSNGARFNGGAFSVTNDATLTFSKPEVVRVSDNFLFPNAFDLDPVTGCALAFVEEGEGAAVVGFEVDDVCDEVTI 298
            MPVTR GPNSGQSEGAGDFVFDV+EG SLTF GKFRAS++ NVRSVFYNRGSIEF+ DSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXX  G DSFVRFSKTATF DNAG F+GA GCAI N GTAIFR DAVFSDHDCDEGA                +DN N  + GGG++NR   D   +GDLVFKAA QFNRN A+ GGG+++ G                        VT D ++TF KPEVVR+SDN L  N ++ DP+TGC+LA+VE G    VVGF+ DD+C EVT+
Sbjct:  100 MPVTRVGPNSGQSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAIDNGGTAIFRDDAVFSDHDCDEGAAVSNTGKMRFYGKAYFSDNRNYRDTGGGVLNRAVYDSDQAGDLVFKAAVQFNRNTAEYGGGIAVTGXXXXXXXXXXXXXXXXXXXXXXXXVTGDGSVTFEKPEVVRISDNTLLANEYNPDPITGCSLAYVE-GNETTVVGFDFDDICQEVTV 396          
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Match: A0A6H5KB90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB90_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 3.360e-25
Identity = 75/101 (74.26%), Postives = 81/101 (80.20%), Query Frame = 0
Query:    1 MPVTRTGPNSG-QSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNRGSIEFQGDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXXXGADSFV 100
            MPVTR GPNS    E A DFVFDV+EG SLTF GKFR+S++ NVRSVFYNRGSIEF+ DSLFNNNGNVFR+N XXXXXXXXXXXXXXX       G DSFV
Sbjct:  100 MPVTRVGPNSVVDPESASDFVFDVAEGGSLTFNGKFRSSQVFNVRSVFYNRGSIEFKDDSLFNNNGNVFRNNEXXXXXXXXXXXXXXXYLAIVNDGEDSFV 200          
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Match: D7G262_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G262_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 1.270e-10
Identity = 54/149 (36.24%), Postives = 74/149 (49.66%), Query Frame = 0
Query:    3 VTRTGPNSG--QSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNR--GSIEFQGDSLFNNNG-NVFRSNXXXXXXXXXXXXXXXXXXXXXXXGADSFVRFSKTATFEDNAGSFNGATGCAIAND--GTAIFRGDAVFSDHDCDE 144
             T  GPN G  Q +  G ++  V  G S+ F G+  A+ + N+RSVFYN   G+IEF  +++F++ G NVFRSN                       G    VR        +N  SF+G +G   +N   GTAIFRG A+FS + CDE
Sbjct:   94 TTEFGPNLGYEQEDSFGGYMVQVLSGGSVEFLGEMAATGLANMRSVFYNEAGGNIEFADNAVFDDIGTNVFRSNLGRLRFYGDATFTNNIYLAIDNEGGS--VRIXXXXXXVENGRSFDGHSGGGFSNTDGGTAIFRGPALFSSNACDE 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHY2_ECTSI5.390e-10263.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB90_9PHAE3.360e-2574.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G262_ECTSI1.270e-1036.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 221..244
e-value: 7.9E-4
score: 17.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig606contigP-littoralis_Contig606:134475..143570 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig606.30.2mRNA_P-littoralis_Contig606.30.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig606 134059..144286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig606.30.2 ID=prot_P-littoralis_Contig606.30.2|Name=mRNA_P-littoralis_Contig606.30.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp
MPVTRTGPNSGQSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNR
GSIEFQGDSLFNNNGNVFRSNEGTIKFRGDAVFKNNFYLALDNDGADSFV
RFSKTATFEDNAGSFNGATGCAIANDGTAIFRGDAVFSDHDCDEGAAVSN
TGKMRFYGKAYFNDNINRNEDGGGLVNRDNVDRGVSGDLVFKAAAQFNRN
NAQTGGGLSIYGGSIEFEKGVTFDSNGARFNGGAFSVTNDATLTFSKPEV
VRVSDNFLFPNAFDLDPVTGCALAFVEEGEGAAVVGFEVDDVCDEVTIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat