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Homology
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI) HSP 1 Score: 445 bits (1144), Expect = 1.590e-150 Identity = 254/377 (67.37%), Postives = 288/377 (76.39%), Query Frame = 1
Query: 1 VRSQQCDDIDAYFGDVGSVTEIDLGSVIGVDCPSNDDAEELPQVIIEAGKTLTVKSSQPFVRFVNLRFVVQEGASLVFDMPVTRTGPNSGQSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNRGSIEFQGDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXXXGADSFVRFSKTATFEDNAGSFNGATGCAIANDGTAIFRGDAVFSDHDCDEGAXXXXXXXXXXXXXXXXNDNINRNEDGGGLVNRDNVDRGVSGDLVFKAAAQFNRNNAQTGGGLSIYGGSIEFEKGVTFDSNGARFNGGAFSVTNDATLTFSKPEVVRVSDNFLFPNAFDLDPVTGCALAFVEEGEGAAVVGFEVDDVCDEVTI 1131
VRSQ+CDDIDAYFGDV SVTEIDLG++I VDCPSNDDAEELP + IE+GKTLTVKS + FVRFVNLRF+V+EGASL+FDMPVTR GPNSGQSEGAGDFVFDV+EG SLTF GKFRAS++ NVRSVFYNRGSIEF+ DSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXX G DSFVRFSKTATF DNAG F+GA GCAI N GTAIFR DAVFSDHDCDEGA +DN N + GGG++NR D +GDLVFKAA QFNRN A+ GGG+++ G VT D ++TF KPEVVR+SDN L N ++ DP+TGC+LA+VE G VVGF+ DD+C EVT+
Sbjct: 21 VRSQECDDIDAYFGDVSSVTEIDLGTIIRVDCPSNDDAEELPYITIESGKTLTVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSGQSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAIDNGGTAIFRDDAVFSDHDCDEGAAVSNTGKMRFYGKAYFSDNRNYRDTGGGVLNRAVYDSDQAGDLVFKAAVQFNRNTAEYGGGIAVTGXXXXXXXXXXXXXXXXXXXXXXXXVTGDGSVTFEKPEVVRISDNTLLANEYNPDPITGCSLAYVE-GNETTVVGFDFDDICQEVTV 396
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Match: A0A6H5KB90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB90_9PHAE) HSP 1 Score: 234 bits (598), Expect = 3.650e-71 Identity = 136/180 (75.56%), Postives = 151/180 (83.89%), Query Frame = 1
Query: 1 VRSQQCDDIDAYFGDVGSVTEIDLGSVIGVDCPSNDDAEELPQVIIEAGKTLTVKSSQPFVRFVNLRFVVQEGASLVFDMPVTRTGPNSG-QSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNRGSIEFQGDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXXXGADSFV 537
VRSQ+CDDIDAYFGDV SVTEIDLG++I VDCPS DD EELP + IE+GKTL VKS + FVRFVNLRF+V+EGASL+FDMPVTR GPNS E A DFVFDV+EG SLTF GKFR+S++ NVRSVFYNRGSIEF+ DSLFNNNGNVFR+N XXXXXXXXXXXXXXX G DSFV
Sbjct: 21 VRSQECDDIDAYFGDVSSVTEIDLGTIIRVDCPSTDDGEELPYITIESGKTLAVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSVVDPESASDFVFDVAEGGSLTFNGKFRSSQVFNVRSVFYNRGSIEFKDDSLFNNNGNVFRNNEXXXXXXXXXXXXXXXYLAIVNDGEDSFV 200
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Match: D7G262_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G262_ECTSI) HSP 1 Score: 100 bits (249), Expect = 1.740e-19 Identity = 79/226 (34.96%), Postives = 112/226 (49.56%), Query Frame = 1
Query: 16 CDDI-DAYFGDVGSVTEIDLGSVIGVDCPSNDDAEELPQVIIEAGKTLTVKSSQPFVRFVNLRFVVQEGASLVFDMPVTRTGPNSG--QSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNR--GSIEFQGDSLFNNNG-NVFRSNXXXXXXXXXXXXXXXXXXXXXXXGADSFVRFSKTATFEDNAGSFNGATGCAIAND--GTAIFRGDAVFSDHDCDE 669
CDD+ A + T ++L DCP +D EL + +E G TLT+ +F NL+F + + A L+FD T GPN G Q + G ++ V G S+ F G+ A+ + N+RSVFYN G+IEF +++F++ G NVFRSN G VR +N SF+G +G +N GTAIFRG A+FS + CDE
Sbjct: 22 CDDLRTALSSPLTGDTTLELSG--DADCPILED-NELEEFTVEGG-TLTLTGPST-TKFTNLKFTIMDQAGLIFDYDTTEFGPNLGYEQEDSFGGYMVQVLSGGSVEFLGEMAATGLANMRSVFYNEAGGNIEFADNAVFDDIGTNVFRSNLGRLRFYGDATFTNNIYLAIDNEGGS--VRIXXXXXXVENGRSFDGHSGGGFSNTDGGTAIFRGPALFSSNACDE 240
BLAST of mRNA_P-littoralis_Contig606.30.2 vs. uniprot
Match: A0A6H5JB77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB77_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 3.430e-6 Identity = 47/131 (35.88%), Postives = 62/131 (47.33%), Query Frame = 1
Query: 295 VFDVSEGASLTFTGKFRASKIDNVRSVFYNR--GSIE--FQGDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXXXGADSFVRFSKTATFEDNAGSFNGATGCAIAND--GTAIFRGDAVFSDHDCDE 669
+ V G S+ F G+ A+ + N+RSVFYN GSIE F GD+ F NN + N VR + ATF +N SF+G +G +N G AIFRG A+FS + CDE
Sbjct: 1 MVQVLTGGSVEFLGEMAATGLANMRSVFYNEAGGSIELRFYGDATFTNNIYLAIDNDGGS------------------------VRINGEATFVENGRSFDGHSGGGFSNTDGGIAIFRGPALFSSNTCDE 107
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1553 |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| Ec32 ortholog description | Pectin lyase fold/virulence factor |
| Ec32 ortholog | Ec-12_006330.1 |
| Cds size | 900 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791264.1969004-UTR-P-littoralis_Contig606:134058..134474 | 1680791264.1969004-UTR-P-littoralis_Contig606:134058..134474 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig606 134059..134474 - |
| 1680791264.3222969-UTR-P-littoralis_Contig606:143570..143622 | 1680791264.3222969-UTR-P-littoralis_Contig606:143570..143622 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig606 143571..143622 - |
| 1680791264.3327944-UTR-P-littoralis_Contig606:144101..144286 | 1680791264.3327944-UTR-P-littoralis_Contig606:144101..144286 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig606 144102..144286 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791264.2114024-CDS-P-littoralis_Contig606:134474..134582 | 1680791264.2114024-CDS-P-littoralis_Contig606:134474..134582 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 134475..134582 - |
| 1680791264.2211506-CDS-P-littoralis_Contig606:135151..135296 | 1680791264.2211506-CDS-P-littoralis_Contig606:135151..135296 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 135152..135296 - |
| 1680791264.2308834-CDS-P-littoralis_Contig606:135951..136029 | 1680791264.2308834-CDS-P-littoralis_Contig606:135951..136029 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 135952..136029 - |
| 1680791264.2406027-CDS-P-littoralis_Contig606:136599..136704 | 1680791264.2406027-CDS-P-littoralis_Contig606:136599..136704 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 136600..136704 - |
| 1680791264.2514734-CDS-P-littoralis_Contig606:137943..138018 | 1680791264.2514734-CDS-P-littoralis_Contig606:137943..138018 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 137944..138018 - |
| 1680791264.2659473-CDS-P-littoralis_Contig606:139103..139155 | 1680791264.2659473-CDS-P-littoralis_Contig606:139103..139155 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 139104..139155 - |
| 1680791264.2766953-CDS-P-littoralis_Contig606:139641..139676 | 1680791264.2766953-CDS-P-littoralis_Contig606:139641..139676 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 139642..139676 - |
| 1680791264.285935-CDS-P-littoralis_Contig606:140074..140215 | 1680791264.285935-CDS-P-littoralis_Contig606:140074..140215 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 140075..140215 - |
| 1680791264.299232-CDS-P-littoralis_Contig606:140749..140877 | 1680791264.299232-CDS-P-littoralis_Contig606:140749..140877 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 140750..140877 - |
| 1680791264.3094685-CDS-P-littoralis_Contig606:143537..143570 | 1680791264.3094685-CDS-P-littoralis_Contig606:143537..143570 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig606 143538..143570 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig606.30.2 >prot_P-littoralis_Contig606.30.2 ID=prot_P-littoralis_Contig606.30.2|Name=mRNA_P-littoralis_Contig606.30.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp
MPVTRTGPNSGQSEGAGDFVFDVSEGASLTFTGKFRASKIDNVRSVFYNR
GSIEFQGDSLFNNNGNVFRSNEGTIKFRGDAVFKNNFYLALDNDGADSFV
RFSKTATFEDNAGSFNGATGCAIANDGTAIFRGDAVFSDHDCDEGAAVSN
TGKMRFYGKAYFNDNINRNEDGGGLVNRDNVDRGVSGDLVFKAAAQFNRN
NAQTGGGLSIYGGSIEFEKGVTFDSNGARFNGGAFSVTNDATLTFSKPEV
VRVSDNFLFPNAFDLDPVTGCALAFVEEGEGAAVVGFEVDDVCDEVTIE* back to topmRNA from alignment at P-littoralis_Contig606:134059..144286- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig606.30.2 ID=mRNA_P-littoralis_Contig606.30.2|Name=mRNA_P-littoralis_Contig606.30.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10228bp|location=Sequence derived from alignment at P-littoralis_Contig606:134059..144286- (Pylaiella littoralis U1_48)
GTCAGGTCTCAGCAGTGCGACGACATCGACGCGTACTTCGGGGACGTGGG
CTCCGTGACCGAGATCGACCTGGGCAGCGTCATCGGGGTGGACTGTCCCT
CCAACGACGACGCGGAGGAGCTTCCCCAGGTCATCATCGAGGCCGGCAAG
ACCCTCACCGTCAAGTCGTCCCAGCCTTTTGTCAGGTACACGAACTGGTG
GAATTTGGTGTTGTTCTGTCTCGTCTTGTCTGCCTGCCTGTCTGTTTGTC
TGCCTGCTTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG
TCTTTCTGTCTGTCTGTCTGGTATACGGCGCGTATCGTTTGTATCCTACG
AATGTATGTGACAGCGCGCGATACGTATGTGACATCTGGTACGTACAGTG
CCTGATACGAAGGAATATAACTATTCATTACTTCGTGTAGAGGGTATGCT
GTTATTTTCAAACCACCAACCAGCGAACGAAAAACATAAGCGACCTCACT
CATCAAAATGCATCCGTTCGTGACGTCACCTCCGCGCTCTCTCTTCGCGC
GCGTGCCGGGGGACCGAACCGTGTTTTTGTGCGCCTTTGTCTCCCCCCCC
CCCCGCCCTCCCCGCGCCCCCATGTCTCTCACACACATCGCACACTAACC
GCCGTATGATGTAGGTTTGTCAACCTCCGCTTCGTTGTCCAGGAGGGTGC
CTCTCTGGTGTTCGACATGCCTGTCACGAGGACGGGCCCCAACAGCGGGG
TGAGCAAATCATATCATGATGCCAGAGGTTTTTCGCTGCCCAAAAATACC
AACTACGACAGCCAGGCTTTCACATAATATCGGCGTTCTGGCAGAGGCAC
GCGATGTTTTTTTTTTCGTACAAGTACAAGCAACGTGTGTATGATACATA
CACACACCAGTTTGCACGATATAGAGTTTTGTTCAGGAGCAGTCCACAAG
AGCAGCGAAGTGTAGGTTCGGCGTCGAATTGCTTCGAATTCATACCGACT
TGGTCGTGATGTGCAGGTGTGCATGTTGATTCTCACATTAGCTCACTACC
GCCGCAGTCTAGCCCGTGGTCACAAACCAGGCACATATCGTGCTAGGAGG
AAAAAAAATAAAAATAAAATATATGGACTATGATCACCCAGAGTCAGATC
AGACATGGTACCGTTGGGGTACCATCTGTGGTGGCCAGAGTACCAAACAA
AATACAGAAAAAAAAATAACAGGCTCGAAAGAAAAACAAAAAGTGGAAAC
AGTCCGACAAACAAAATAAATAACCAAGACAAACCTCAACCATAACCATA
TACTTCGAAGTACTTCGTACATCGAACCAGGGCCCAGGGCCATGACAGAC
CAAGGCAAAGGCAAACCAGGGCGATGGTCCAGTAACTCAATGATCAATAG
ACGAAAGACAAAAAAAGAAGAAGATACAGGGAGGGCACAAAGACTGAGGG
AGGGCACTCGTACACAAGCACAATAAACAGGCCGCCAAACAAAGAGGGAG
CAGGGGAACGAAAAGGGAAAAGAAAAAAAAAAGAGAGGCAACGAGGAATA
AAATACATGCATGGAGAGTGCAGAGGGAAGACCGGAAGTACCGGAAGTCG
GGGGGGGGGAAGGTGATAAAAATAAAATAAAAGGCATGCAATCAATCGCA
AACATGTCTTGCCACGAGGTCTGCCTGTTCACGCTTGCTCTCCTCAGTCG
CACTCATGCCTCCTGCTACTGGCACCACCGTACCCAGTTGTTTCTGCCCC
ACATCTTTGGCAGCAGCTACACCACCGCTCCGAGATTTCCGCCCTACAGG
TTTTCCACTCCGGTCACCCCGTAGCTTGGCATTTGACTGCTTCTTCTTGT
GCTGTGCAACTCCAACCCCACTACCCCGCTGCCCTTGTGCCCCCCCGTGC
CCCTCCTCTCGTTTATCCCCGCCATCCGTTCTCCCTCTTTTGGCCAAGGC
CTGCCCCTCAGCCGCGTCCCTCTCCCTTTTCTGTCGACGTGTCTCTGACA
AGTCTCCCTCTTTCTTGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCG
TCGATCCTGTCGTACCACTCGTCAGCTCTCTTGGCACTTGCTTCCCACCC
CTGTTTTTTGTCGACCACGATGTCGAACGCTTCGAGGTCCTCCTGCATTC
GCCTCAGCCAGTCAAACTCTTGCCCCCCCAGATACCTCGCTCCCCCCTGC
AATTCTCCCAAAAGAACAATTTTCGGGAGTCTCTCGTCTCTCATGCGCGC
AACGAATCCTGCGAAGCACATTCGCCCCTTGCGCACGGTGGCCTCAATGC
TCTCGTCGCAACCCGCGGTGATCAGGGCTTTGGCGTAGGAGAGGGGTCGG
TCTGTTCTCTCCCTCTTTTTCCATCCGATGCAGCGAAGGAGGAAGAAGTG
GTGGGCTGACCGAAGCTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGA
CACACCCGTAGAGTAGGGTCTCCACGACTTCAGCTTGTGCATGTATGTGC
GCGACTAAATAATAAAAAGCAAAACTAAGACAGGGGAGCCTTTATTTAAT
TTTCGAGGTTTATGGTGTCTGTCTGTCTGTCTGTATGTCCGAGATGATGG
CCAATACACTTTGGCACCAGTTCAGCACAGATTGCTACGACCAAAAGGGT
TTAAACTTATGAGGTAAGTAGCATCTACCCATTGCTGCTGGGTTTACCGC
AGCCCGTGTCGTGTGCGCACAGCTATCTCGTCGGAGGCGCGCAATTATCG
GTATCCCTTTTTTGTGAAAAATGATGAGGGGCGTTTTGGGTTCGTTGTGC
TGGCGGGACACCTGCTGTTCTGCAGCACTCACTGCAGGAACAGCAGTATA
CGCCACCAAACAGCAACGCACACGGCTTAATGTAGTTAGTTGAGAAGCGG
CCCTTCAACGCACACTGCTTCTCAACCCCGATCCACGAGTACATCGTTCT
TGTCGTCGTCGTTGTTGTTGTTGTTGCTGTCGTCGGTCGTGGAGAGACGA
GCGGGTCGATGCTATTGTCGGTCCCCCTTGAGGTGCGCGATGGTGCGTGC
TGTTTGCAGCCACGAAGCGCCCTATTATCTGATCATAGCCGTCCCTCCGT
CATTCAGCGCGAGGTTTCGATTGCCTCGGGGCTCTCCATTTTCTTCGATC
GACTTCGTTCGTTCGCTGATTAATTCGTGCGTGAAACTTGGTCACGGTGT
ATGATACAACCTGTTTTTACGACAACAAACTATTGCACCGATAAAAAGCA
CTCACGGCTACTTTGATCAAAGCAGCTTTCCTGATGATGATGCTGCTGCT
GCTGCTGCTGCTGCTGCCATAATTCATTCCGCCCCCGGCATACACCACTC
GCTCGCATTTTTGCCAACCGCTACGTATTTGTCACGCGTTTGTTGCATGC
TGCATGCAGCAATCCGAGGGGGCAGGCGACTTCGTGTTCGACGTCTCCGA
GGGCGCAAGCCTGACCTTCACGGGAAAGTTCCGCGCTAGCAAGATTGACA
ACGTCCGCTCGGTCTTCTACAACCGGGGTTCCATCGAGTGAGCTCGATAA
CATGCGCGGTGCAGCAGCAGCAGCAGCAGCGGCAGCCACAGCTCTCACGA
GAGAGTTCAATGAAAGAGAGGGAGCACCTCGAAGAGAGGATAGTGGCTCA
ACACCCCCCCCCCCCCCCTCCCTACTCTTCCCCCCGTCCCGTGTCCCCTC
CGGGGTCCCCTCCCCTCCTCGCCCTTGCCCTCCCCTGCTTATCTCTTCTG
GTCGGTCATTTTCCCCGTTTTATATCAATCAAGGGGGCCCGTGGCTTCCG
TGTGTTTTGATATTTTTCCGTGCTATCTTTTTTTACGCGTGGAACAAACA
CTACACAGAAGTCATCCAACACACCGTTGTTGCGTTATTTGCGATGCTAC
ATCCAGCAGGTAGGCGCGACGGCTTTCTTATTTTTTCTCAAATGGAGGGC
AATTGGGTTTCTTTCTATGATACATGCATAATACTCCGTATGTCGGTATG
TGTGTGTTGCTTGAGCTTACCTACGTTTGACCTATCATAAGTCTGGCGTA
TCTTAAACCTCTGGGGCACAGGTTCCAGGGCGACTCGCTGTTCAACAATA
ACGGCAACGTTTTCCGGAGCAACGAGGGGACCATCAAGTTCCGAGGCGAC
GCCGTGTTCAAGAACAACTTCTACCTCGCCCTCGACAACGACGGCGCTGA
TTCCTTCGTCAGGTGCGACAAACTCTACACGACGAGGGAGTCGCTCATGA
GTGGTTGCCATAGTTGGTGACACCGGCTGTGCTTTGCTGCTACCATACGT
AGGTAGCTCGCGGTGTGCGGCGTGCGTGGCGACTACACTACGGCGGCGGT
TGCAAGAACGCGGGTGAAAAATGAGAAAAAGCATTCTTGGACCACAAATA
TAGAGGGCTAGAGCAGCCGCGTGTACGTTCTCGATACACAACGGCCTAAG
TGTGGCAGCACGAATGCAACAACGAACGCGAGCCCGATTTACCTTGACCC
TTTTTCTCGTCGCGGCCGCTGCCGCTGCCGCTACCGCATTTCCGTCAAAC
CTCCTTCCTCGGATCGACTCGGCTTTCGACTTCCCCGGACGGGCATCAAA
CTCTCCCCAGGTTTTCGAAGACGGCCACGTTCGAGGACAACGCAGGTAAG
CCGAGCTGCTCAGCTGCTCAGGCGGACAGCCCCCCCACCAAATCAAAAAA
GGAGGAGCATAAAAACGCACGAGTATTTCATTCGGTACCGATACGCGCCT
CTTTCGCCCTTAGGTTTAGGTCGCTATTACTGGTGAATTCCTTCCTGCAC
TGCTGTAGCTTCGGCGAGTTGAACACAGGAAGATGGAACGTGCTAGGCAA
GCAAATATCTTGACCCTTTCAAACGAAACCGGCTTTCGTTTTCCGTTTTC
CGTTTTCCGTTTTGTTTTTCATCACAAAAACATTCTGTCTTTTCTGACTT
ATCGGCGCTGGACTGACCTCATCACCCCCTCGCGCCATACATGCATGCAT
CCGGCGTCTCCCTCACCGTCGCTTCTGTTGCTGCTGCCGCTACCTCTCCC
CTACGGCGTATGGTGGTCTCTCCCGCTTTTTTTGTGTCTGCTTTTTTTGT
GTGCGGAAAAAAAAACGCGGTTTTGCTCTAGGTTCCTTCAACGGGGCCAC
GGGCTGTGCCATCGCCAACGACGGCACCGCCATGTAAGTGAGCCACGGAG
CTTGAAAATCGATGGAGTGTATAAATACACTGATTGCAGCGCCAAAACGG
CACAGACCCCACACGAGACTGTTGGTGCGTATACCGGTATCGTGCGAGAC
CCGTACATTGCTACTATAATACATACAGCAGTATCAACCGCTGCGGTTGA
GCGATGCCGTTGTTGGCGATCGATGTGGTCGGTGTGCTTCGTGTGCACCC
TGCACACAGCGGTTGCTCAGAAGTGGAATAAGGTGCTGTAACAGGTGTCA
ATAGATGCTGCAGTACCGTACCGACGGCAACGGTCGAGTGCCTCCCCCCT
CCCCCTGCGGCGGGCATACCTTCGAGATATATGGTTTCTTCAGAACAAGG
GCAAGGGTATGGTTAAAGACGAAGCCGACCGGAAAGGTTCATTTTTCCAA
CCCTACGTTAATTTGTCCCATTAAAACATAACTTTCCCCTCCACCACTGA
TAAATGTGCATGATTCGTGTCTACCGTGATCGGCCCAAGGGTCGGGAGTG
GGGGGGGGGGTTGCTTTGTCACGTACCACACGGCACGCCTTTGGAAGCCA
TTGAAGGCGAAAGTGTTTGTTTGATGAAAGACTTTGGCCGGGTACTGTGC
GTGTGTTTTTTTTTATACGTTAGCAATGTATGGATGAGAGCGTGTGTATG
ACAGTCCGTTGAGACGGAGAACTTTCGTGACTGGGTACTGTCAAGCATTG
CGTGACCATTCTTAGACGCGCGGCAGGATGAGGTGGGTGAGAATCAGCAT
TTCATAAACCAATTAACCCTGCCCCAAATCGTCGTTTCCAATTTGTTCTT
TGACTATGACAAAACCAAAAGAAAATCCACACCCACACTCAGGCGTGTGT
GTGCGTTTGCATCCGTCTCTTCGACACATGCGAAATGACTAGTCTTAACA
CAATTCACCTGCGCGGCAAGTCTCTCCCCGCTGTCGTGAGGCGACGCTCA
ACCAACCTCACCACGCTCTCTTTGTTACCCCCCCCCCCCCCCGCTGCCGG
CCCCCATATTGCTTTGTGTGCCTCTTGTTTAATCAATTCATTTTTTTTCA
GGAACTGACAAACAAAAGCTTCCGCGGTGACGCCGTTTTCTCGGATCACG
ACTGCGACGAGGGGGCCGCCGTATCCAACACCGGGAAGATGAGGTGGGTG
TCAGATGAAATCTACCGTCCGGGCAAAGTTTCTCGAAAATTTCCACTTCT
TTTCTCGAGATCTAGAAGTATTGGACATCGTCATTAATAATCAATGTCTT
TTAAGGGGGCTCTTTTTTTTCAGGCCGCCAAATTTCAACGAACGTTTGAT
TTATTTCTTCCCCGAAACATGAAACCGCTGACAATATGAAGGCGTTCTTC
CCGCGATCGGGGAAAATCAGCGGGCGAGAAAAAAAATCGAATACTCGATT
TCGCGGATCGTTTTTTTTTCTTCCAGAAACGCACCCAACACACACACATA
CACACACACACACAAACACACACACACACACACAAACACACACACACACA
CACACACACACACACACACACACACAAAACCCGCACGAGCGCAGCAACAG
CAGTCAGTGCAGACAGTAAAAGAAAGGTCAGGGTACCCGAGAAAATCACT
CCGTCGAGGAACCCACCCCCCCCCGTTCTGCACAATCGAGCAGGTGTGGC
GAAAGGTTAGCGAAATAACTACCTGGTACAGCAGCAGAGATGACAATGAA
TCGGAATCCTTTTATTTCGCCGCTTGCCTGCGCCCCCTTTTTTGTTTGCT
TCGCCAACACAAACCCCGCCGGCAACCCTTTCAAAGCCAGGGAACAAGCT
GTGAGAACCGCGTATATATGTAGCGGTAGCGGCGTCCGGGGCCACTATAG
TGTAGAACTCCGTTCCGATAGAAACAGGGGTTCGGAGGTCTTGTACGATA
GCTCTGAAATGCTGTCTGAGGCCGCCGTCACATAAAGTTTGTGACTGGAA
CTCCAAACACACCACCATCGCGATGTGGAACCGTCTCACGGCACACACAC
GCTTTGATCTTGCGACCTCCGTTTCGAAAGAATCAGGAATCGGGACGTCT
TCAATCTCTGTCGCGGTCTGCTCTTGCGACGTGTCCTTTGTTTTATTGAT
TTTACAACAGAAAAGCACCATCGCCGCTTTCGGCTGAAGCGGTCCGGAGA
TATTACAAGTTTTGTCTTCCGTGGAATAATGAGACGTACCCGAAGAATTT
TCTTTGAAAAAAATGATTTAAAAAAAGACCCGAACCAAAAAAAGAAGATG
CACGCCCGAAAATCAAATTTTGTGTGCACATCATTTTTACCCTTATGTAA
ATAAACAACGAACGAGCGCACCAGTAAGTGGTGTACAACATCGGAGATTA
ATATGCTGTCCTTTTGTTCTTCCTTTTTACAGGTTCTACGGGAAGGCATA
CTTCAACGACAACATCAACAGGAACGAAGACGGCGGAGGCTTGGTGAACA
GGGACAATGTCGACAGGGGAGTGTCCGGGGACCTTGTGTGAGTTGTTTTT
TGCGTTTGAAGCGTTTACCACGGCAGCAGTAGCAGCAGCAGCAGTAGAAG
CAGCAGCAGCACAAAACCGCCCAACCAGCACCCAGGTAGACAAGCTGTAC
CACTGCCAGCGCTCCGATCACATATTTTCATCCGCCTAGAGACAGAAAGG
CCAGGAATATGCGAGATACCACATGTCATGGAAAGACATGACGAGCTCGC
CGAGGGGAATTCCGTTGCCCTGCTCCGCGCTGTGCGCCCTTCTTCTTGTA
GATGGGGGGCCCGGGCGCGTGACGGGGGGAGGGGGGGGGGGGTCATACGA
AATAGGTTGACTCCAAAGAAGGCAAAAAAAATACGCAATATGTGCGCCCT
CCCCCCCCGCTGACCGTGCCACTCCCCTCCACCTTTTAGCCTATGCCGCC
GAATTCTGAACTTATCAAATAGCCCTGCTATGTCGGTACCTCCTCTCGCG
CCTTCGCCCTCTGCCTGACCCCCCCCCCCCCTTCTCCTTCCCTCCTCTCC
CTCCCCCTCCCCCCCCCCAAATCCATATTTTGTATGTGCGCTTCCGCGCT
TGGTCAGGTTCAAGGCTGCCGCTCAGTTCAACAGGAACAATGCCCAAACC
GGCGGAGGCTTGTCAATCTACGGCGGCAGCATCGAGTGAGTACTTTTCAT
CGCCACTACCGCCTTACCTCCTCACCTCAACAGTGCACGTGAGTGCTGAT
GCCTGACTTTGCTATTTACTGATTTCAACATTTTGATCTACACAGCGCGC
GCCTGTGTGTAGAGGGCAACTGACTGGGGGTGTGGCAATAAAGAGTTTTT
TTTTCACACAATCATGAAAAACTTATAAAAAGGCAACAACTGGATACCGG
TACCAACATGCACTGAACGGCATTTTCACTGTGACGTCTCGACCCACTCA
CCACCCACGGATTCTCAGCCTATCAAAAACCAGCGGCACGGATGTTGACC
ATTAGGGAAACCGCAGACGCCCAATGTCTTCATGGTGCGAATCATGCGAC
ATCACACGGCTCCTCGCTCTAGGCCCCTAGCAATATCTTCTTTTGGTCTG
TGAAAACCCGATGTGTGCTAAATAACACGTCCCGACTTTATGCGGATGCG
AGGGTCTATGGTCGTCTCACGACTACGGTTCGGCCAGCCATCATCAGATC
ATGAGCACAACTCCCCTCCCCTCCCCGCTTTCCCCCACTTTTTTTATTTG
CAATACGATACTTGGCTAATGAAATCTGATGATTGATTCCCCCCCCCCCT
TGTTTCTTGTTATGTGATGATCTACTACCAATGCCGGCAGGTTCGAGAAG
GGTGTCACGTTCGACAGCAACGGTGCCAGATTCAACGGGGGGGCGTTCTC
CGTCACCAACGACGCGACGCTGACGTTCAGCAAGCCGGAGGTCGTCAGAG
TCTCGGACAACTTCCTTTTCCCCAACGCCTTCGATGTAAGCCTGCGTGGT
TTGCATCCCTTCTACAGATGAAGGGGGGCGTCGATGTCGTCGTGCGTGTG
CAGAGTCTTCGACGACCGAAGTTTGTGACTGAGTTAAAGCTTTAAGAAAA
TTTGCGCGGAGTGCATAGCTCAACGCGGTGGGGTGTTAATGTAAAGCTGT
TGTTGTTGTGTGCACATTAAGAATAAAGCCGTTCCCACCTCTAGCCGTAC
CTCCAAGTTGGGGGACTTTTCTGGCCGACCAGAGACGGCTTGCTCCTTTT
ACTGGTCACAAGCTTGCACAACATAAAAATGTGAACTGATGGATGGATAG
GTAAATGTTTTTTGTCTATATAGGCTCGCTTCGACTGAGGAGCGCAGAGA
AGGATAACTGCTACCTGCACCATCAAGAAGCGAGAGTGTGCAGTGTACCT
CCTCCGTTCGGCGCAGTTTTTCTTTCCTCCTCAACCCCCCCCCTCTCCCA
AAAGGCTTCCAAATGTACGTGTAATGTACGTATTATAATGTACAAACGAA
CGCAACGCACCCACACTTCTCTCTCTCGCCCGCGCGCACCACCCGGGGTA
TCAGCTGGACCCGGTCACAGGGTGCGCTCTGGCGTTCGTGGAGGAGGGGG
AGGGCGCTGCCGTTGTCGGGTTCGAGGTCGACGACGTGTGCGACGAAGTG
ACCATTGAGTAATAATCGCGCGGGGAAAGAGCAAACGAGGAGTGTGTGGG
GTACACTACACCATATGTGCATGTATGTGTACGTGTAATATTATATGTGT
GACAAAGCTGGACGTCGTCTGCTGGGCTGACACGGCGGGAGGAGGAGGAA
AAAGAGGCAGCAGCGAGTGCACGAGAGACCTGCGTTGTGTGTGGACTCTC
TTTCGCTCTCTGTCTATCTCTCTCTCCACACTCGCCCAGCTTTCGTTCCG
TTGAGGGGGGGTCGTGAAGGGGCAATTATCGGCAATTATCGGTCTCTGCT
GCATGTTTTCCGTCTCTTGGAGGAACAAGTTGTATCCATACGTTATCATA
GATTGATGAGAGTCGTCACGGGTCACGGTGTGCGGGGGGTTGTTTTTGAG
ATGGGGGTAGAACGAGAAGCATCACAGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig606:134059..144286- >mRNA_P-littoralis_Contig606.30.2 ID=mRNA_P-littoralis_Contig606.30.2|Name=mRNA_P-littoralis_Contig606.30.2|organism=Pylaiella littoralis U1_48|type=CDS|length=900bp|location=Sequence derived from alignment at P-littoralis_Contig606:134059..144286- (Pylaiella littoralis U1_48)
ATGCCTGTCACGAGGACGGGCCCCAACAGCGGGCAATCCGAGGGGGCAGG
CGACTTCGTGTTCGACGTCTCCGAGGGCGCAAGCCTGACCTTCACGGGAA
AGTTCCGCGCTAGCAAGATTGACAACGTCCGCTCGGTCTTCTACAACCGG
GGTTCCATCGAGTTCCAGGGCGACTCGCTGTTCAACAATAACGGCAACGT
TTTCCGGAGCAACGAGGGGACCATCAAGTTCCGAGGCGACGCCGTGTTCA
AGAACAACTTCTACCTCGCCCTCGACAACGACGGCGCTGATTCCTTCGTC
AGGTTTTCGAAGACGGCCACGTTCGAGGACAACGCAGGTTCCTTCAACGG
GGCCACGGGCTGTGCCATCGCCAACGACGGCACCGCCATCTTCCGCGGTG
ACGCCGTTTTCTCGGATCACGACTGCGACGAGGGGGCCGCCGTATCCAAC
ACCGGGAAGATGAGGTTCTACGGGAAGGCATACTTCAACGACAACATCAA
CAGGAACGAAGACGGCGGAGGCTTGGTGAACAGGGACAATGTCGACAGGG
GAGTGTCCGGGGACCTTGTGTTCAAGGCTGCCGCTCAGTTCAACAGGAAC
AATGCCCAAACCGGCGGAGGCTTGTCAATCTACGGCGGCAGCATCGAGTT
CGAGAAGGGTGTCACGTTCGACAGCAACGGTGCCAGATTCAACGGGGGGG
CGTTCTCCGTCACCAACGACGCGACGCTGACGTTCAGCAAGCCGGAGGTC
GTCAGAGTCTCGGACAACTTCCTTTTCCCCAACGCCTTCGATCTGGACCC
GGTCACAGGGTGCGCTCTGGCGTTCGTGGAGGAGGGGGAGGGCGCTGCCG
TTGTCGGGTTCGAGGTCGACGACGTGTGCGACGAAGTGACCATTGAGTAA back to top
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