prot_P-littoralis_Contig606.23.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig606.23.3
Unique Nameprot_P-littoralis_Contig606.23.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length421
Homology
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BLAST of mRNA_P-littoralis_Contig606.23.3 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 345 bits (884), Expect = 1.150e-112
Identity = 228/373 (61.13%), Postives = 268/373 (71.85%), Query Frame = 0 
Query:   48 QCDDLELYFVDVAADSEIDLSGVLTVDCPENADGEVIAEVLIESGNTLTIKSHEP-VRFVNVRFTVEAGASLVFDMPTIEIGPNSGDFDNPRGFVFDLYEGSTVTFMGEFLGSEVENVRSMFYSTGSIEFKGDALFSNNGNVFSSNLXXXXXXXXXXXXXXFFLALVNEGSDAFVRFSKTATFEDNAGSFDGSRACAVRNNGGAVIFRDTTVFSDHSCDGGRAVFNEGKMRFYGKVQFNEN-----SGGGLWN------SDGGDLEFKRAAQFNDNIAEIGGGFLVXXXXXXXXXXXXXXXXXXXXXXXAFAVTGDGSVTFEKPAVVRVRDNNALVGVQSVET-TGCSLAFVE-DTATLSGFDFDDVCDEVTV 406
            +CDD++ YF DV++ +EIDL  ++ VDCP N D E +  + IESG TLT+KS E  VRFVN+RF VE GASL+FDMP   +GPNSG  +    FVFD+ EG ++TF G+F  S+V NVRS+FY+ GSIEFK D+LF+NNGNVF SN XXXXXXXXXXXXXX      N+G D+FVRFSKTATF DNAG FDG+  CA+ +NGG  IFRD  VFSDH CD G AV N GKMRFYGK  F++N     +GGG+ N         GDL FK A QFN N AE GGG  V  XXXXXXXXXXXXXXXXXXXXX   VTGDGSVTFEKP VVR+ DN  L    + +  TGCSLA+VE +  T+ GFDFDD+C EVTV
Sbjct:   25 ECDDIDAYFGDVSSVTEIDLGTIIRVDCPSNDDAEELPYITIESGKTLTVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSGQSEGAGDFVFDVAEGGSLTFNGKFRASQVSNVRSVFYNRGSIEFKDDSLFNNNGNVFRSNXXXXXXXXXXXXXXXXXXXXXNDGEDSFVRFSKTATFIDNAGFFDGAWGCAI-DNGGTAIFRDDAVFSDHDCDEGAAVSNTGKMRFYGKAYFSDNRNYRDTGGGVLNRAVYDSDQAGDLVFKAAVQFNRNTAEYGGGIAVTGXXXXXXXXXXXXXXXXXXXXXXXXVTGDGSVTFEKPEVVRISDNTLLANEYNPDPITGCSLAYVEGNETTVVGFDFDDICQEVTV 396
[Close]
BLAST of mRNA_P-littoralis_Contig606.23.3 vs. uniprot
Match: A0A6H5KB90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB90_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 7.170e-49
Identity = 105/176 (59.66%), Postives = 135/176 (76.70%), Query Frame = 0 
Query:   48 QCDDLELYFVDVAADSEIDLSGVLTVDCPENADGEVIAEVLIESGNTLTIKSHEP-VRFVNVRFTVEAGASLVFDMPTIEIGPNSG-DFDNPRGFVFDLYEGSTVTFMGEFLGSEVENVRSMFYSTGSIEFKGDALFSNNGNVFSSNLXXXXXXXXXXXXXXFFLALVNEGSDAFV 221
            +CDD++ YF DV++ +EIDL  ++ VDCP   DGE +  + IESG TL +KS E  VRFVN+RF VE GASL+FDMP   +GPNS  D ++   FVFD+ EG ++TF G+F  S+V NVRS+FY+ GSIEFK D+LF+NNGNVF +N XXXXXXXXXXXXXX +LA+VN+G D+FV
Sbjct:   25 ECDDIDAYFGDVSSVTEIDLGTIIRVDCPSTDDGEELPYITIESGKTLAVKSEESFVRFVNLRFIVEEGASLIFDMPVTRVGPNSVVDPESASDFVFDVAEGGSLTFNGKFRSSQVFNVRSVFYNRGSIEFKDDSLFNNNGNVFRNNEXXXXXXXXXXXXXXXYLAIVNDGEDSFV 200
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig606.23.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHY2_ECTSI1.150e-11261.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB90_9PHAE7.170e-4959.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 332..353
e-value: 2.0E-4
score: 19.0
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..21
score: 6.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 91..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig606contigP-littoralis_Contig606:107777..128007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig606.23.3mRNA_P-littoralis_Contig606.23.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig606 107340..128123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig606.23.3 ID=prot_P-littoralis_Contig606.23.3|Name=mRNA_P-littoralis_Contig606.23.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=421bp
MRKPAILCAFLAIALLSGVSCQEDNPDCNNLGLLDERTNGFEDFCKTQCD
DLELYFVDVAADSEIDLSGVLTVDCPENADGEVIAEVLIESGNTLTIKSH
EPVRFVNVRFTVEAGASLVFDMPTIEIGPNSGDFDNPRGFVFDLYEGSTV
TFMGEFLGSEVENVRSMFYSTGSIEFKGDALFSNNGNVFSSNLGTIKFRG
DTVFRNNFFLALVNEGSDAFVRFSKTATFEDNAGSFDGSRACAVRNNGGA
VIFRDTTVFSDHSCDGGRAVFNEGKMRFYGKVQFNENSGGGLWNSDGGDL
EFKRAAQFNDNIAEIGGGFLVDGGTVEFKKGVTFDANSAEQNGGAFAVTG
DGSVTFEKPAVVRVRDNNALVGVQSVETTGCSLAFVEDTATLSGFDFDDV
CDEVTVTREVSDSCLYFGNC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence