mRNA_P-littoralis_Contig6.307.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI) HSP 1 Score: 376 bits (966), Expect = 5.020e-122 Identity = 216/279 (77.42%), Postives = 233/279 (83.51%), Query Frame = 2
Query: 320 YVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVLEEDRIAHEDMEAGGEVNGSAATTRGEGVLMERPQQDGTRPSAIKHAVRMPV 1156
YVILDYTVPGLGFV D L SFL WVEDNP GA+AFA VY+FTTVCFIPGSLLTLGAGLVFGRALGTGLG++VGSLAVL GAT+G+ILAFLLGRFVLQ+QAQGLFNKFKVL AVNRAI+SQGLKLVILLRLSPVVPFSAFNYVMGVT V FRDYA+GCVGFIPGTVAFVFIGTTASGLLGDD E XXXXXXXXX GGIATVIAVVL+SIY+KRALNKVLEEDR+ E +E G E ME+ QDG RP+ ++HAVRMPV
Sbjct: 57 YVILDYTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVEQEALEMGLESGNGGMNN------MEQSAQDGARPAVVEHAVRMPV 329
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 272 bits (695), Expect = 5.490e-82 Identity = 152/259 (58.69%), Postives = 193/259 (74.52%), Query Frame = 2
Query: 263 KKQKLIKAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGL---LGDDGEXXXXXXXXXXXXXXXXXXXX-------GGIATVIAVVLVSIYSKRALNKVLEE 1009
KK+K+ K L L+LV ++IYVI+DY+VP LG V+ +L FL WVEDNP +G AFA VY+F TV FIPGSLLTLGAGLVFGRALG G GV +GS AV++GA+IGAI+AF+LGR+VLQ AQ LFNKFK++ AV++AI+SQGLKL +LLRLSPVVPF+AFNY+MG+TA+ +DY +GC+G IPGTVA+VFIG++ASG+ G+D E G IATVIAV L+S Y+K+ALN++L E
Sbjct: 20 KKEKIRKLCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGIGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNE 278
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK) HSP 1 Score: 246 bits (629), Expect = 2.140e-72 Identity = 159/261 (60.92%), Postives = 192/261 (73.56%), Query Frame = 2
Query: 263 KKQKLIKAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGD--DGEXXXXXXXXXXXXXXXXXXXX---------GGIATVIAVVLVSIYSKRALNKVLEED 1012
+K KLIK GL LLV I+IYV+LDYT+P LG V+ IL SFL WVE++P +G +AFA VY+ TTV FIPGS+LTLGAGLVFGRAL +AFLLGR+VLQ AQ LFNKF VL AV++AI+++GL+LVILLRLSPV+PFSAFNYVMG+T V FR Y LGCVG +PGTVA+VFIGT+A+GLLGD DG XXXXXXXXXXXXXXX G ATV+AVVL+++ S+RAL +VL ++
Sbjct: 44 RKNKLIKFGLLSLLVGIIIYVVLDYTLPSLGHVNRILTSFLLWVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVLMKE 304
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA) HSP 1 Score: 207 bits (526), Expect = 7.990e-58 Identity = 113/271 (41.70%), Postives = 177/271 (65.31%), Query Frame = 2
Query: 263 KKQKLIKAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVLEEDRIAHEDMEAGGEVNGSAATTR 1075
++ ++ K L L+L+ +++VI+D T G ++ D +++FL W+E+NP +G F GVY+ TV F+PG +LTLGAG VF A GTGLG+ VG+++V VGA++G++LAFL+ R++L++ A GL KF + A+++A++ +GLK++ILLRLSPV+PF+A NYV GVTAV F+DY+L +PGT+ +VF+G +A L G + ++AV L S Y+K+ LNK+L+++ A+E + AGGE G + R
Sbjct: 12 RRSRIKKLVLALVLIGFIVFVIIDSTTNG--YIKDGIQTFLRWIEENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISVFVGASLGSMLAFLISRYILREWAVGLTEKFPIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLA-------TIGSSTDSKALTISTVVVGVVLGIVAVALSSRYAKKELNKILDQEEEANERI-AGGEGEGGKSQDR 272
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE) HSP 1 Score: 199 bits (505), Expect = 6.420e-54 Identity = 110/259 (42.47%), Postives = 160/259 (61.78%), Query Frame = 2
Query: 371 LKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVLEEDRI-AHEDMEAGGEVNGSAATTRGEGVLMERPQQDGTRPSAIKHAV 1144
L++ W+EDNP G + FA ++ +T+ F+PG LLT+GAG+ FGRALG G GV+ GS+AVL+GA + ++AF LGR+VL +QAQ ++++L+AVN AI+ G+K++ILLRLSP+VPFS FN++ G+T V RDY LG VG +PGT+AFV+IG + +G + + G +A V+A+V V+IY++RAL + L E + A+ D E E GSA + G+ P K AV
Sbjct: 93 LETSFEWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELDANADKEEKAEHEGSATDV-----------ECGSSPGEFKEAV 340
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV) HSP 1 Score: 190 bits (482), Expect = 5.300e-51 Identity = 108/268 (40.30%), Postives = 167/268 (62.31%), Query Frame = 2
Query: 224 GASDNDTAPEP----PTKKQKLIKAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVLEEDR 1015
G DND+ P+ K+ L K + L+LV +++++I+D G FV ++ L W+E+NP +G F VY TV F+PGSLLTLG+G VF + G G GV++ +LAV VGAT+GA++AF+LGR++L+ + L K+ V A+++A++ +GL+++ILLRLSP++PF+A NY+ GVT+V F+ YA +PGT+ FVF+G +A L+ D G G + VIA+ L S Y+K+ LNK+LE+++
Sbjct: 23 GGDDNDSWPKEVKACTDKRALLNKIIVGLVLVGLIVFIIVDSVTHG--FVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGASAGSLV-DSGNGGDTPVVTIATIVV------GVVFGVIAIALTSRYAKKELNKILEQEK 281
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.090e-49 Identity = 102/247 (41.30%), Postives = 155/247 (62.75%), Query Frame = 2
Query: 263 KKQKLIKAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVL 1003
+K +LIK L LLLV +IYVI+D+ + ++SFL W+EDNP +G AF GVY T+ F PG +LTLGAG VF ALG GLGVV+ + AV VGA+ G++ AFL+GR++L+ GL K+ + AV+ A++ +GL+++ILLRLSP++PF+A NY++GVT+V FRD+ + +G +PGT+ +VF+G++A L G + ++ V + S Y+++ L V+
Sbjct: 26 RKARLIKIALGLLLVGFIIYVIVDFATSK--HLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSSAGSLTDSSS-------GGDNSAVRILTIVLGSVFGILGVCVTSYYARKELQNVI 263
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A0G4EY60_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EY60_VITBC) HSP 1 Score: 185 bits (469), Expect = 4.870e-49 Identity = 120/278 (43.17%), Postives = 167/278 (60.07%), Query Frame = 2
Query: 281 KAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVLEEDRIAHEDMEAGGEVNGSAATTRGEGVLMERPQQDG 1114
K +FL+++ I++Y+I+D T V + L F WV+DNPA G +A+ VY+ TV FIPGS+LTLGAG F A G G G+ G AVLVGA +GA LAF GRF+ + QGL +KFKV+ A+++ ++QGLKL ILLRLSPVVPFSAFNY+MG T ++RDYA+G +G IPGT +V+IG + G+ G +AT IAV +V+ ++++AL ++ E++ A E +A G+ EGV P DG
Sbjct: 55 KLLVFLVIIAIIVYIIIDSTTGQR--VAEGLDIFKEWVQDNPATGILAYMAVYMVCTVAFIPGSILTLGAGFTFVCAFGNGPGMAAGIGAVLVGAFVGAQLAFFCGRFLFKSWVQGLTDKFKVMRAIDKVFETQGLKLNILLRLSPVVPFSAFNYIMGGTRTRYRDYAIGTLGIIPGTALYVYIGAIPAFAGACSGKAEGSGHWSQWVFLAV-----GLVATFIAVFIVTWFARKALREITEKE--AAEASKADGK----------EGVETPGPDLDG 313
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: W7TSR1_9STRA (SNARE associated Golgi protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSR1_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.130e-48 Identity = 109/261 (41.76%), Postives = 162/261 (62.07%), Query Frame = 2
Query: 278 IKAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQS-QGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVLEEDRIAH---EDMEAGGE 1048
++ G+ +L +++VI + +DY+ G V +L +FL WV +P +GA+AFA VY + V F+PG+ LTLG G +FG+ALG G G V SLAV VGA+ GA+ AF LGR++L + AQ N++ +L A++ ++ +GLK+V+LLRLSP+VPF+A NY+M VT+V + Y LG VG +P VA+ F+GTTA GL + G G +A V AV ++S +++ L K+ +E A D+E GGE
Sbjct: 50 LQGGILVLWLVVVILIAVDYSPAGHRHVARVLSTFLEWVGRHPLRGAMAFAAVYALSVVFFVPGAALTLGGGFLFGQALGVGPGTVFASLAVFVGASAGAVAAFSLGRWLLHETAQSTLNRYTILRALDASLHGHRGLKIVLLLRLSPLVPFTALNYMMSVTSVSLKTYTLGLVGMVPAVVAYSFLGTTAGGLTREAG-----GESSVERGVKIAMYVVGAVALVAAVGVLSRFAREELRKIQDEGEGARGEGRDVEGGGE 305
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA) HSP 1 Score: 181 bits (460), Expect = 6.340e-48 Identity = 109/279 (39.07%), Postives = 163/279 (58.42%), Query Frame = 2
Query: 254 PPTKKQK-LIKAGLFLLLVIIVIYVILDYTVPGLGFVDDILKSFLTWVEDNPAQGAIAFAGVYIFTTVCFIPGSLLTLGAGLVFGRALGTGLGVVVGSLAVLVGATIGAILAFLLGRFVLQQQAQGLFNKFKVLTAVNRAIQSQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGFIPGTVAFVFIGTTASGLLGDDGEXXXXXXXXXXXXXXXXXXXXGGIATVIAVVLVSIYSKRALNKVLEEDRIAHEDMEAGGEV---NGSAATTRG 1078
PPT ++ L K G L+LV +IYVI+D I+ FL W+EDNPA G AF GVYI ++ FIPG +LTLGAG VF ALG G+G+ + ++AV GA GA +FL+GR++L+ L K + A++ A++ +GL+++ILLR+SP+VPF+ FNYV GVT++ RDYA+G +G +PGT+ ++ +G++A L+ G + V+ V + Y+K+ LNK+L + R + G+V NG A+T G
Sbjct: 19 PPTSRRAFLFKIGFGLILVGFIIYVIIDLATTKNTM--RIVADFLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSSAGSLVDSSSSGNDSTVRIISIVL-------GIVFAVLGVYATTYYAKKELNKILSQRREVNAAASTEGDVDSSNGKGASTIG 288 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig6.307.1 >prot_P-littoralis_Contig6.307.1 ID=prot_P-littoralis_Contig6.307.1|Name=mRNA_P-littoralis_Contig6.307.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=330bp MNDSMISSNREQHSIAVTGASDNDTAPEPPTKKQKLIKAGLFLLLVIIVIback to top mRNA from alignment at P-littoralis_Contig6:1261812..1267294+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig6.307.1 ID=mRNA_P-littoralis_Contig6.307.1|Name=mRNA_P-littoralis_Contig6.307.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5483bp|location=Sequence derived from alignment at P-littoralis_Contig6:1261812..1267294+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig6:1261812..1267294+ >mRNA_P-littoralis_Contig6.307.1 ID=mRNA_P-littoralis_Contig6.307.1|Name=mRNA_P-littoralis_Contig6.307.1|organism=Pylaiella littoralis U1_48|type=CDS|length=990bp|location=Sequence derived from alignment at P-littoralis_Contig6:1261812..1267294+ (Pylaiella littoralis U1_48)back to top |