prot_P-littoralis_Contig6.137.12 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.137.12
Unique Nameprot_P-littoralis_Contig6.137.12
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1152
Homology
BLAST of mRNA_P-littoralis_Contig6.137.12 vs. uniprot
Match: D8LL17_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL17_ECTSI)

HSP 1 Score: 1078 bits (2788), Expect = 0.000e+0
Identity = 677/1146 (59.08%), Postives = 781/1146 (68.15%), Query Frame = 0
Query:    6 ELFRHDVPVLRTSLVRHGLVDPSTSPEARRASLPPCS-EDLTATDRGEEQWITAAAVGRGAGFQALVGVDNVVVGHVRAAEELRSTLLSVTSSKEPPKDRSPAATTARRGERSPIGEERLRKRHSRLETSPNSPPSAPSSGRHWAGPAASMAAASAMAAARRVDRPFYVGTSGQTSRRSGGSPEETPQPG-GVSMANLLDIAVTLFGPGGG-----GRHSAGGDSGGATRGPGGSAGTPSSRVNKNKSKDDKLVTFTVDVHAGNSMTLGVTVKELGGGAVFVQDVRKLPGGFSGPAELAGVLIGDVILGINYQPLEKGLVHTSALLAEAIALSGFVKLQISRAVRPNTWRQPLPGKDCAIVTELMWRTAQLRKFGVLSSAERHTIAGLILQRMAWEEGTLVRPPRAPAHLSLLTSRLTASSSFESSASSLLDSMVLQVKGLREAISVRCLCAKSTVETVEVSSVWDPPTVEEAASGATTTATPEATTSASTLVTVRYILRVEDVATGREWLVFPQYSDFSELHQELLMLWPPIADLPFPAKRPVPRAMAPGSRAASGPGGEGAVVEERGGRLEAFLDGAIALLGIYASIDSRCSEALRLVQVFLRRPTDLARAELALSPALCDQKRAELLVYKLLNQVDSPAARMKHLLMGDFENEASLAPNVESLMKGTSSRLRRLQNYVLEQHEDQLSSSAHDTSEAKEVIMRKAVRRQVELSLYLPLRRCLWKELTRRLQSPARKLSRAIKVLRDSSPVVFGVETPGILASKEWGPVKESMGQATRRVLPTDQIDGLRRAAEHITALHASLQQSA--RGGSGRCDADERSAPRSKPNNGAVGVADDDAERVDWKLFGRRGEEXXXXXXXG--GVVFVEDATAARDGCLSPENGDMRSRGRDSCGRLKVSGESSACPATSDEGETYLDGDGSNGGDGEATDSVASSSSASKCMPAPPFAQGGPEENNGTSTEHMAEPKTTEATPLVDERPWGAARVHNGGVVTTEIPAMREAPLRGKLKGRRSWYASSASHETRPTLEIGPTLSWESISSVDD--SPGAKSQGRKRRGGQGSAGDGQVATIGRIDSEEAMGADDFLPLFSLVLVHSAPLDLLFPQTLLTYLMDLDGSLSEAGYLVATLEAAVAFITQVRSGNVS 1138
            ELF HDVPVLRTSLVRHGLVD STSP AR+A   P S +DL A DRGEEQW  AAA G  +GFQALVGV++VVVGHVRAAEELR++L S  S ++  K R+P   T RRGE+    EERLRKR   L T   S  +A SS R  AG AAS+AA  AMAA RR DRP+YVG +G  SR   GSPE+TPQP  GVSMANLLDIAV+LFG G G     GRHS  GD             + SS V K+K K++KLVTFTVDVH G SMTLGVTVKELGGGAVFV+DVRKLPGG SGPAELAG+L+GDVILGINY+PLEKGLVHTS  LAEAIAL+GFVKLQISR VR  +WRQ LP KDCA+V+ELMWRTAQLRK G   SAERH+IAGL+LQRMAWEEGT      + A   LL +     SS ES+AS+LLDS+VL+ KGLR+AI VRCL  ++ VETVEV SVW P T  E AS     A PEA T AST  TVR+++RVEDV TGR+WLVFP Y D S L QELL +WPPIADLPFPAKR      A    A +    E  VVEER  RLEAFLDGA++LLG+Y SID RCS AL +VQ FL RP DL  A+LALSPAL DQKRAELL+Y+LLNQ DSPAARMKHLLM DFE++ SLAP+V+SLMK  SSRLRRLQ++VL+ HE+QLSS A+ TSE +E I+RKAVRRQVELSLYLPLRRCLWKELT R++ PARKL RAI+ LR S P VFG+ET G+LASKEWGPVKE MGQATR VLPTDQIDGLRRAAEH+TALHASLQ +A    G    DA + S      ++GA+ V   D+ R   KL+ R   +       G  G V  E ATA   G L PE G+   R RDS G L++ G            +T    D   G  G AT+ VAS S      PA   A    EE      + + E          D+  W A  V +  + T E+   REA LR      RSW A S SH+  PT     T SW+SI  +++  +PG                           S++AMGADDFLPLF+LVLVHSAPLDLL PQT+LT+LMDLDGSLSEAGYLVATLEAAV+FITQV + ++S
Sbjct:    7 ELFPHDVPVLRTSLVRHGLVDLSTSPRARKAPAGPASSQDLAAGDRGEEQWTKAAAAGGNSGFQALVGVNSVVVGHVRAAEELRASLRSPPSPRDLQKIRAPGTPT-RRGEQPKSAEERLRKRSVSLRTDSPSAQAAASSRRQRAGSAASIAATLAMAAVRRGDRPYYVGAAGGASR---GSPEQTPQPTEGVSMANLLDIAVSLFGSGDGAGGRGGRHSIDGD-----------GSSKSSGVVKSKKKEEKLVTFTVDVHTGGSMTLGVTVKELGGGAVFVEDVRKLPGGSSGPAELAGILVGDVILGINYEPLEKGLVHTSTRLAEAIALAGFVKLQISRCVRSKSWRQSLPRKDCALVSELMWRTAQLRKAG---SAERHSIAGLVLQRMAWEEGT------SRALAPLLATTPPVDSSLESAASALLDSLVLEAKGLRKAIDVRCLHTRTIVETVEVPSVWGP-TSSEVASSDAKAAPPEAATPASTRATVRFVVRVEDVGTGRQWLVFPHYGDLSALRQELLAMWPPIADLPFPAKRSSVSRAAAAETAET----EETVVEERVVRLEAFLDGALSLLGMYVSIDPRCSGALHIVQDFLGRPEDLFNADLALSPALRDQKRAELLLYRLLNQADSPAARMKHLLMRDFESDTSLAPDVDSLMKCASSRLRRLQDFVLDHHEEQLSSCAYTTSETREAIVRKAVRRQVELSLYLPLRRCLWKELTWRIRDPARKLERAIQALRRSPPAVFGLETLGVLASKEWGPVKEVMGQATRNVLPTDQIDGLRRAAEHLTALHASLQLNACCDNGDASTDATDSSCNGRSGSSGALSV---DSRRASLKLYSREDGKGEAGEEDGEEGSVRAEGATAPTHGTLCPEEGEFGIRERDSNG-LRLGGRPDR--------QTRAVSDSFTGDGGRATNDVASDSDGPSSAPALSLAD---EEQRLNVVQELVE----------DDLCWQAQCVQDEDIATEEVD--REA-LRPNFNSSRSWSALSTSHDISPTAAKSSTSSWDSIGGLNEGAAPGXXXXXXXXXXXXXXX-XXXXXXXXXXXSDQAMGADDFLPLFALVLVHSAPLDLLLPQTMLTHLMDLDGSLSEAGYLVATLEAAVSFITQVHASSLS 1094          
BLAST of mRNA_P-littoralis_Contig6.137.12 vs. uniprot
Match: A0A7S3H9E4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9E4_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.260e-28
Identity = 151/568 (26.58%), Postives = 245/568 (43.13%), Query Frame = 0
Query:  254 FTVDVHAGNSMTLGVTVKELGGGAVFVQDVRKLPGGFSGPAELAGVLIGDVILGINYQPLEKGLVHTSALLAEAIALSGFVKLQISRA---VRPNTWR------QPLPGKDCAIVTELMWRTAQLRKFGVLSSAERHTIAGLILQRMAWEEGTLVRPPRAPAHLSLLTSRLTASSSFESSASSLLDSMVLQVKGLREAISVRCLCAKSTVETVEVSSVWDPPTVEEAASGATTTATPEATTSASTLVTVRYILRVEDVATGREWLVFPQYSDFSELHQELLMLWPPIADLPFPAKRPVPRAMAPGSRAASGPGGEGAVVEERGGRLEAFLDGAIALLGIYASIDSRCSEALRLVQVFLRRPTDLARAELALSPALCDQKRAELLVYKLLNQVDSPAAR--MKHLLMGDFEN--EASLAPNVESLMKGTSSRLRRLQNYVLEQHEDQ----LSSSAHDTSEAK-EVIMRKAVRRQVELSLYLPLRRCLWKELTRRLQSPARKLSRAIKVLRDSSPVVFGVETPGILASKEWGPVKESMGQATRRVLPTDQIDGLRRAAEHITALHASLQ 803
            ++V V  G + TLG+ VK+L    + V  +++      G  E AG+ +GDVI G+N+ P  +G          +  L   +K +  R    +    WR        +PG       E++ +   L +  V S  ER     ++L  M   +   +R        S L      ++  +      L+  ++Q KGLR A+ VR +  KS  +TV                                     Y+LRVEDV +G +W+V  +YSDF  L++ELL +     ++ FP KR   R  A              +VE R   LE ++   + +L +YA++DS  S ALR +Q FL     L   +    PAL DQ+  EL+ Y+ LN   S A +  ++ +   D +   E   A     ++      L  ++ +V + H  Q    L +   D +E +    +RK +RRQVE +LYLPLRR +++ +   L   ++ L RAI +L+ + P  F +E P +  +       ++  +  +  LP DQ   L +AA  +  LH   Q
Sbjct:  128 YSVVVDLGKTGTLGIGVKDLADNVLAVSMLKR-ENCCPGAGEDAGIRLGDVIYGVNFIPTREG----------SKTLISIIKKETGRGKTHIHIQGWRCHQLCSDAIPGYHFPRADEILVQAYSLVQSKVFSDWERWNFIEILLGHML--DDLKLRASGDDGDTSGLLEPSQGAARAKQMQVLDLERNIMQAKGLRTALCVRIVHTKSHGDTVV------------------------------------YVLRVEDVQSGLQWVVQRRYSDFFALNEELLDMTHFTKEVEFPRKRLSIRNTAK-------------LVENRIVALEQYMRRMLHILTLYATMDSSASRALRHLQTFLGVDNYL---DCVHPPALDDQRFIELMAYQFLNDFGSEACQQCVRFITSVDLDGMVEIGTADGYVPVLNHARDALAEVEQFVQQLHMAQMIQTLQTRREDLNEDQLRSFVRKCIRRQVEAALYLPLRRTVFRIVFTFLAEKSKLLQRAITMLQGAPPKFFMLE-PFVTRATSLPRTVKAFRRVIQAYLPADQGQLLIQAATAVMELHKECQ 629          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.137.12 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL17_ECTSI0.000e+059.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3H9E4_9STRA2.260e-2826.58Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 264..342
e-value: 0.0042
score: 26.3
IPR001478PDZ domainPROSITEPS50106PDZcoord: 255..322
score: 8.9283
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 481..604
e-value: 1.3E-8
score: 36.3
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 492..578
IPR001683Phox homologyPFAMPF00787PXcoord: 505..575
e-value: 6.6E-5
score: 23.5
IPR001683Phox homologyPROSITEPS50195PXcoord: 473..608
score: 10.651327
IPR003123VPS9 domainPFAMPF02204VPS9coord: 1070..1132
e-value: 3.7E-8
score: 33.5
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 238..345
e-value: 2.4E-6
score: 29.3
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 251..348
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80VPS9 domaincoord: 1060..1147
e-value: 2.0E-9
score: 39.4
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 660..1133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 949..963
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 799..835
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 872..983
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 924..939
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1021..1061
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1021..1042
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 253..338
e-value: 8.09797E-6
score: 43.3243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:521512..530410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.137.12mRNA_P-littoralis_Contig6.137.12Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 521015..530936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.137.12 ID=prot_P-littoralis_Contig6.137.12|Name=mRNA_P-littoralis_Contig6.137.12|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1152bp
MSKKMELFRHDVPVLRTSLVRHGLVDPSTSPEARRASLPPCSEDLTATDR
GEEQWITAAAVGRGAGFQALVGVDNVVVGHVRAAEELRSTLLSVTSSKEP
PKDRSPAATTARRGERSPIGEERLRKRHSRLETSPNSPPSAPSSGRHWAG
PAASMAAASAMAAARRVDRPFYVGTSGQTSRRSGGSPEETPQPGGVSMAN
LLDIAVTLFGPGGGGRHSAGGDSGGATRGPGGSAGTPSSRVNKNKSKDDK
LVTFTVDVHAGNSMTLGVTVKELGGGAVFVQDVRKLPGGFSGPAELAGVL
IGDVILGINYQPLEKGLVHTSALLAEAIALSGFVKLQISRAVRPNTWRQP
LPGKDCAIVTELMWRTAQLRKFGVLSSAERHTIAGLILQRMAWEEGTLVR
PPRAPAHLSLLTSRLTASSSFESSASSLLDSMVLQVKGLREAISVRCLCA
KSTVETVEVSSVWDPPTVEEAASGATTTATPEATTSASTLVTVRYILRVE
DVATGREWLVFPQYSDFSELHQELLMLWPPIADLPFPAKRPVPRAMAPGS
RAASGPGGEGAVVEERGGRLEAFLDGAIALLGIYASIDSRCSEALRLVQV
FLRRPTDLARAELALSPALCDQKRAELLVYKLLNQVDSPAARMKHLLMGD
FENEASLAPNVESLMKGTSSRLRRLQNYVLEQHEDQLSSSAHDTSEAKEV
IMRKAVRRQVELSLYLPLRRCLWKELTRRLQSPARKLSRAIKVLRDSSPV
VFGVETPGILASKEWGPVKESMGQATRRVLPTDQIDGLRRAAEHITALHA
SLQQSARGGSGRCDADERSAPRSKPNNGAVGVADDDAERVDWKLFGRRGE
EEEAEEEEGGVVFVEDATAARDGCLSPENGDMRSRGRDSCGRLKVSGESS
ACPATSDEGETYLDGDGSNGGDGEATDSVASSSSASKCMPAPPFAQGGPE
ENNGTSTEHMAEPKTTEATPLVDERPWGAARVHNGGVVTTEIPAMREAPL
RGKLKGRRSWYASSASHETRPTLEIGPTLSWESISSVDDSPGAKSQGRKR
RGGQGSAGDGQVATIGRIDSEEAMGADDFLPLFSLVLVHSAPLDLLFPQT
LLTYLMDLDGSLSEAGYLVATLEAAVAFITQVRSGNVSTMIISDSRAAGS
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036871PX_dom_sf
IPR001683PX_dom
IPR003123VPS9
IPR036034PDZ_sf
IPR037191VPS9_dom_sf