prot_P-littoralis_Contig115.62.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig115.62.1
Unique Nameprot_P-littoralis_Contig115.62.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length155
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig115.62.1 vs. uniprot
Match: Q8QNQ7_ESV1K (EsV-1-2 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ7_ESV1K)

HSP 1 Score: 112 bits (280), Expect = 2.350e-27
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 0 
Query:   86 GCVISHNAIEVAARRDHLHLVKYIWYTGSLCTQCACIGASSGGKLHVLQWLFPEDKWFPDLVDMSRMLV 154
            GCVISH  +EVAAR  HL +++YIWY GSLC  CAC GAS GG+L VL+WLFP DKWFPD +D SR+LV
Sbjct:   86 GCVISHGTVEVAARCGHLRIIEYIWYVGSLCPHCACTGASMGGQLDVLKWLFPGDKWFPDQLDTSRLLV 154
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig115.62.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNQ7_ESV1K2.350e-2768.12EsV-1-2 n=1 Tax=Ectocarpus siliculosus virus 1 (is... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig115contigP-littoralis_Contig115:153169..153633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig115.62.1mRNA_P-littoralis_Contig115.62.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig115 153169..154324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig115.62.1 ID=prot_P-littoralis_Contig115.62.1|Name=mRNA_P-littoralis_Contig115.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp
MKSPTEIDLPVSRCSASCQTASTRTSHPFASCSPRNTPRKLRRSARTRRS
TTWSSTSKTGCRYQRTCPSGQRSLEGLICLSSRSSGCVISHNAIEVAARR
DHLHLVKYIWYTGSLCTQCACIGASSGGKLHVLQWLFPEDKWFPDLVDMS
RMLV*
back to top