prot_P-littoralis_Contig1139.1.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: D7FJZ6_ECTSI (RNA_pol_L_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJZ6_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.390e-68 Identity = 101/106 (95.28%), Postives = 105/106 (99.06%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGRPALEVLKEGLRDLRDVCNILEERVQEEIPDA 106
MAVNEHRPTVAD+KFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGRPALE+LKEGLRDLRD+CNILEERV+ EIPDA
Sbjct: 1 MAVNEHRPTVADIKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGRPALELLKEGLRDLRDLCNILEERVEREIPDA 106
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A835YNA2_9STRA (RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA2_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.320e-45 Identity = 75/113 (66.37%), Postives = 92/113 (81.42%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTT-GRPALEVLKEGLRDLRDVCNILEERV----QEEIPDAPV 108
M+VNEHRP AD+KF++ EG++ +SATF+FGDEDHTLGNALRHVLMQ E DFCGYSVPHPSEPKMNLRLQT G PA++VLK GL+DL +C+IL+E++ + P APV
Sbjct: 1 MSVNEHRPKPADLKFEILEGATTTSATFVFGDEDHTLGNALRHVLMQMPETDFCGYSVPHPSEPKMNLRLQTRDGVPAIDVLKRGLQDLVTICDILDEKLDAMGEPSDPAAPV 113
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A7S4DHT9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHT9_HETAK) HSP 1 Score: 141 bits (356), Expect = 6.180e-41 Identity = 66/95 (69.47%), Postives = 77/95 (81.05%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGRPALEVLKEGLRDLRDVCNIL 95
MAVNEHR A+ +F V EGS+ SATF+FG+EDHTLGNALRHVLMQ KE DFCGYSVPHP+EPKMN+RLQT G AL VL+ GL DL +C++L
Sbjct: 28 MAVNEHRTMPAEERFAVLEGSTSHSATFVFGNEDHTLGNALRHVLMQRKETDFCGYSVPHPTEPKMNVRLQTHGEDALTVLRAGLADLSGICDLL 122
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A4D9D350_9STRA (RNA_pol_L_2 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D350_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.100e-37 Identity = 64/116 (55.17%), Postives = 85/116 (73.28%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTG-RPALEVLKEGLRDLRDVCNILEERVQEEIPDAPVKQEEDED 115
M+VNEHRP A+ KF+ E + S TF+FGDEDHTLGN+LRHVLM KE FCGYSVPHPSEPKMN+RLQT+ +PAL+VLK+GL ++ ++C++ + + I D +Q + D
Sbjct: 1 MSVNEHRPQPAEKKFESLEYTDEHSRTFVFGDEDHTLGNSLRHVLMGRKETRFCGYSVPHPSEPKMNIRLQTSATKPALQVLKDGLHEMVEICDLFDFTLDRAISDYDEQQADSTD 116
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A7R9U1D2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1D2_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.800e-37 Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSS---LSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGR--PALEVLKEGLRDLRDVCNILEE 97
MAVNE R ADV F+V E + + + TF+FGDE HTLGNALRHVLM+ KE FCGYS+PHPSEPKMN+RLQTT + PA+++LK GL+DL DVC++++E
Sbjct: 1 MAVNEQRLATADVAFEVLEAADETDVGNRTFVFGDEGHTLGNALRHVLMRRKETHFCGYSIPHPSEPKMNMRLQTTDKEMPAIDLLKTGLQDLADVCDVVDE 102
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: W7TJI2_9STRA (Dna-directed rna polymerases i and iii subunit rpac2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJI2_9STRA) HSP 1 Score: 133 bits (334), Expect = 3.240e-37 Identity = 64/116 (55.17%), Postives = 85/116 (73.28%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTG-RPALEVLKEGLRDLRDVCNILEERVQEEIPDAPVKQEEDED 115
M+VNEHRP A+ KF+ E + S TF+FGDEDHTLGN+LRHVLM KE FCGYSVPHPSEPKMN+RLQT+ +PAL+VLK+GL ++ ++C++ + + I D +Q + D
Sbjct: 37 MSVNEHRPQPAEKKFESLEYTDEHSRTFVFGDEDHTLGNSLRHVLMGRKETRFCGYSVPHPSEPKMNIRLQTSATKPALQVLKDGLHEMVEICDLFDFTLDRAISDYEEQQADSTD 152
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A7S2UY40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY40_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.700e-36 Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTT-GRPALEVLKEGLRDLRDVCNILEERVQEEIPD 105
MAVNEH+ AD++FQ +GS++ S TF FGDEDHTLGNALRHVLMQ + + CGYSVPHP+EP M++RLQT G A EVLK+GL DL +C+ L ++ + + D
Sbjct: 1 MAVNEHKTLPADIRFQKLQGSTIDSCTFSFGDEDHTLGNALRHVLMQQAKTELCGYSVPHPTEPYMHVRLQTIQGSDATEVLKDGLNDLAKICDTLTDKFDKALND 106
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A7S1TTH9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTH9_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.790e-34 Identity = 58/102 (56.86%), Postives = 77/102 (75.49%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQV---KEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGRP--ALEVLKEGLRDLRDVCNILEE 97
M+VNEHR +V FQ+ + + TFIFG+EDHTLGNALRHVLMQ +E FCGYS+PHPSEPKMNLRLQT + A+++LK GL+DL ++C++++E
Sbjct: 1 MSVNEHRTPQEEVDFQILNSPDDKDPGNRTFIFGNEDHTLGNALRHVLMQRRETQFCGYSIPHPSEPKMNLRLQTVNKDTDAVDLLKTGLKDLSEICDVVDE 102
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A7S0XDL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDL5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.460e-31 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 1 MAVNEHR-PTVADVK-FQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTTGR-PALEVLKEGLRDLRDVCNILEERVQEEIPD 105
M+VN+HR P ++ + F++K G++ SATFIFG+EDHTLGN+LR+VL Q EVDF GYSVPHP EPK+N+RLQT A+ VLK+GL+DL + NIL++ + I D
Sbjct: 1 MSVNDHRIPLASNTELFEIKPGNNNKSATFIFGNEDHTLGNSLRYVLSQRNEVDFVGYSVPHPYEPKLNIRLQTKENYTAVNVLKDGLKDLEETANILDDVFIQSIKD 108
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Match: A0A7S2WKX3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKX3_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.970e-30 Identity = 60/111 (54.05%), Postives = 72/111 (64.86%), Query Frame = 0
Query: 1 MAVNEHRPTVADVKFQVKEGSSLSSATFIFGDEDHTLGNALRHVLMQNKEVDFCGYSVPHPSEPKMNLRLQTT-GRPALEVLKEGLRDLRDVCNILEERVQEEIPDAPVKQ 110
MAVNE A+ + QVK G S ATFI GD+DHTLGNALRHVLMQ + +FCGYS+PHPSEP ++LRLQT G A E LK GL++L C+ +E D KQ
Sbjct: 1 MAVNEVTAKTAEHRLQVKLGESEDCATFILGDQDHTLGNALRHVLMQTRGTEFCGYSIPHPSEPYVHLRLQTQDGTSAAEKLKAGLKELSVSCDHIEAAFDRAFDDFEKKQ 111 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1139.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig1139.1.2 ID=prot_P-littoralis_Contig1139.1.2|Name=mRNA_P-littoralis_Contig1139.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bpback to top |