mRNA_P-littoralis_Contig1.442.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.442.1
Unique NamemRNA_P-littoralis_Contig1.442.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 1.010e-89
Identity = 161/298 (54.03%), Postives = 205/298 (68.79%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
            ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P ANW+  SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAERRA+AKREG RL+  NR G K+ KK  R QSVA+AT  A+ +A+  + PLL     + +  R + ++ E +        AE  L       H+  S++  EE++K   G   R KFM + +  LEK M
Sbjct:   39 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLLPRGGSEESEWRLKQEEEESKSAVLDTKAAEYALQKAMCADHQKCSEQIVEEKEKKRPGYQTRVKFMEQMVAMLEKEM 335          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 1.300e-85
Identity = 181/355 (50.99%), Postives = 231/355 (65.07%), Query Frame = 1
Query: 1258 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
            G +Y+VADL+  M+ E+  E     GG             XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW+  SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN  LP D QREDDGTG   G  GGAERRASAKREG RL   NR G K+ KK    Q+VA+AT  A+ +A+  + PLL+    + +  R + ++ E + A +        L       H+ +S++  EEE +   G   R KFM + +  LEK M
Sbjct:  147 GVDYSVADLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLLSRGGSEKSEWRLKQEEEESKSAALDTKAAAYALQKAMCADHQKYSEQIVEEEGQKRPGYQTRVKFMEQMVAKLEKEM 493          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 5.410e-84
Identity = 145/221 (65.61%), Postives = 173/221 (78.28%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 2091
            ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+E+W   + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+A+W+  SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDDGTG      GGA+RRA+AKREG RLH  NR GKK+  K    QSVA+AT  A+ +AI  M PLL
Sbjct:  176 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 1.440e-83
Identity = 160/299 (53.51%), Postives = 209/299 (69.90%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL----ASMKPDTANGRPQ----TDDPERQVAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
            ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+++W   + RF DPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+ANW+  SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDDGTG      GGA+RRA+AKREG RL+  NR GKK   K    QSVA+AT  A+ +A+  + PLL     S K +    + +    T + + + + + L  E   +H  +SK+  EEEK+  +G   R +F+R+ +  +EK M
Sbjct:  411 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLLEKVGGSEKSEWYKKKEEHACKTAEHDSKASGLALQKEMTESHAEFSKKIVEEEKEKADGYQTRVRFLRKMLAGIEKEM 708          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.630e-81
Identity = 154/287 (53.66%), Postives = 197/287 (68.64%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFM 2268
            ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR  VD E+V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW+  SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAER A+AKREG RL+  NR G  + KK  R QSVA+AT  A+ +A+  + PLL     + +  R + +  E +        AE  L       H+ +S++  EE++K   G   R KFM
Sbjct:  203 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLLPLGGSEKSEWRLKQEVEESKSAALDTKAAEYALQKAMCADHQKYSEQIVEEKEKKRPGYQTRVKFM 488          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 4.740e-78
Identity = 162/278 (58.27%), Postives = 196/278 (70.50%), Query Frame = 1
Query: 1258 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 2091
            G +Y+V DL+  M+ E+  E     GG             XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW+  SGNNQPW++F QGD+D +++G AI+KYPELDQVCN  LP D QREDDGTG   G  GGAERRASAKREG RL   NR G K+ KK    QSVA+AT  A+ +A+  + PLL
Sbjct:  309 GMDYSVTDLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 2.050e-77
Identity = 131/191 (68.59%), Postives = 154/191 (80.63%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 2001
            ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+E+W   + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+ANW+  SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDD TG      GGA+RRA+AKREG RLH  NR GKK
Sbjct:  299 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 2.470e-72
Identity = 165/355 (46.48%), Postives = 213/355 (60.00%), Query Frame = 1
Query: 1258 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
            G +Y+VADL+  M+ ED  E         +S         XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E V+H   N+I QPNISAEK++ M +  KAKWN P+ANW+   GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG   G                  +  NR G K+ KK  R QSVA+AT  A+ +A+  + PLL     + +  R + ++ E +        AE  L  E    H+ +S++  EE++    G   R KFM +    LEK M
Sbjct:   23 GVDYSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLLPRGGSEKSEWRLKQEEEESKSAALDTKAAEYALQKEMRADHQKFSEQIVEEKENKRPGDQTRVKFMEQMEAKLEKEM 355          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 4.440e-70
Identity = 132/211 (62.56%), Postives = 163/211 (77.25%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGT-SGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 2058
            ERKGPHCMMRL GIL ED +RP +I+SRLQA R +LD SAVG R  +W   ++RF DP H VR+IVD E  +H +PN+I QP+I AEK++K W+  KAKWN P+ANW+ + SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAERRA+AKREG RL+  NR G K+ K+  R QSVA+AT  A+
Sbjct:  733 ERKGPHCMMRLEGILCEDSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942          
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 8.730e-65
Identity = 161/353 (45.61%), Postives = 213/353 (60.34%), Query Frame = 1
Query: 1264 EYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
            +Y+VA+LF  M+ ED  E     GGS+ +G  GS    XXXXXXXXXXXX     ERKGPH MMRLVGI  ED + PL I+SR+QA R +LD SAV  R+ +W   ++RF D  H VR+IVD   V+H +PN+I QPN SAEK++  W+  +A WN P+ANW   SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG      GGAERR +AKREG RL   N             +SVA+A   A+ +A+  + PLL     + +  + +  + + + A +        L       H+ +S++  EEE+K   G   R   + + +  LEK M
Sbjct:  282 DYSVANLFDAME-EDKPELGDSAGGSAPNG--GSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLLPRGGSEKSERQLKQQEEQSKSAALDTKAAAYALQKAMCADHQKYSEQVVEEEEKKRPGYQARINVVEQMVAKLEKEM 630          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXZ6_9PHAE1.010e-8954.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZX9_9PHAE1.300e-8550.99Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FJ39_ECTSI5.410e-8465.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKV3_9PHAE1.440e-8353.51Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KNY9_9PHAE1.630e-8153.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFU0_9PHAE4.740e-7858.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU69_ECTSI2.050e-7768.59Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KQ52_9PHAE2.470e-7246.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNM0_9PHAE4.440e-7062.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN7_9PHAE8.730e-6545.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:1901408..1905585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIC6
Model size2515
Max annot lvl2880.D7FIC6|-
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.33e-19
EggNOG OGs2EJXG@1|root,2SPZB@2759|Eukaryota
Cds size1302
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.442.1prot_P-littoralis_Contig1.442.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 1901644..1903476 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789325.3599527-UTR-P-littoralis_Contig1:1901407..19016431680789325.3599527-UTR-P-littoralis_Contig1:1901407..1901643Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1901408..1901643 +
1680789325.396941-UTR-P-littoralis_Contig1:1903476..19035491680789325.396941-UTR-P-littoralis_Contig1:1903476..1903549Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1903477..1903549 +
1680789325.4053428-UTR-P-littoralis_Contig1:1903811..19039951680789325.4053428-UTR-P-littoralis_Contig1:1903811..1903995Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1903812..1903995 +
1680789325.4140139-UTR-P-littoralis_Contig1:1904865..19055851680789325.4140139-UTR-P-littoralis_Contig1:1904865..1905585Pylaiella littoralis U1_48UTRP-littoralis_Contig1 1904866..1905585 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789325.3719585-CDS-P-littoralis_Contig1:1901643..19025471680789325.3719585-CDS-P-littoralis_Contig1:1901643..1902547Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1901644..1902547 +
1680789325.3864353-CDS-P-littoralis_Contig1:1903078..19034761680789325.3864353-CDS-P-littoralis_Contig1:1903078..1903476Pylaiella littoralis U1_48CDSP-littoralis_Contig1 1903079..1903476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.442.1

>prot_P-littoralis_Contig1.442.1 ID=prot_P-littoralis_Contig1.442.1|Name=mRNA_P-littoralis_Contig1.442.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=434bp
MDEDNSLRTSRPCRTKALPAKLQGAGEPGAAAGHGQAQLRQPAAAALAAT
GGRRTAGGQRAASTQREPVRLAKAPVRAGSPRAHVTTSSPPSSLGTSLQQ
RSPVSCGSVGVEIDVENDTALTATGTGGQARVLETEAGAGTDSSSDGSNE
VDADGGGVFSDEALEALLTACEGNGSKSPRSGRESGESSVVDARSNLARS
DVVDSSDDSSPTNVNGKGKGKARTESVGGRRNPHQASAEKAKGKGYQLWA
LGFLQRACSYRDIPRMSQQKSKEAIAEALTARDKSMGRPTPFFDDLEAIV
EGKPRKNSTDEAIPAEVVLALRATLTLVRVDRNSSTPFKFGPRVQRSRPL
RHHGRRRRRRGCGRGRRKFREWCHRVVRRHCCGGGGWRRRWSGGWHRGAE
RAALHDAARRHSRRGRRSPAAHRQSASGESCSA*
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mRNA from alignment at P-littoralis_Contig1:1901408..1905585+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.442.1 ID=mRNA_P-littoralis_Contig1.442.1|Name=mRNA_P-littoralis_Contig1.442.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4178bp|location=Sequence derived from alignment at P-littoralis_Contig1:1901408..1905585+ (Pylaiella littoralis U1_48)
TAAGGCCCTGTCTAATCATTCCGGATTTTTGCCGGGAAACAGAGAACCAT TCGCGGGAAACATGAACTGAGTTTCGCTCTGTTCTAAACGATTGGGCGAG TATTTTTTTTCAAAATGCATTTTCTCCGTTTTTTGTCCTGAAGCCCGAGC TTCTTCCCGCCCACAGCAGTCACGCCGCATCCGAACTCTAGACGCCAAGC GAAGCACAGCAGCAGTTGTCGTGCGAAGCCCACAACATGGATGAAGACAA CAGCCTTCGAACTAGTAGACCGTGTAGGACCAAGGCTCTACCTGCAAAGC TGCAGGGCGCAGGTGAGCCAGGTGCTGCTGCTGGACATGGACAAGCGCAG CTCCGGCAGCCTGCTGCTGCTGCCCTTGCTGCTACCGGCGGGCGGCGTAC TGCCGGCGGGCAGCGAGCTGCAAGCACGCAGCGTGAACCGGTCCGTTTGG CCAAAGCACCGGTAAGAGCAGGGAGCCCGAGGGCACATGTTACCACATCC TCTCCGCCCTCAAGCCTCGGAACTTCTTTGCAGCAGCGTTCACCGGTATC ATGTGGGTCGGTAGGGGTGGAAATAGATGTTGAGAACGACACTGCTTTGA CGGCCACGGGCACCGGTGGTCAAGCTCGAGTGCTCGAGACGGAAGCTGGA GCAGGCACCGACAGCAGCTCTGACGGCAGCAATGAGGTGGACGCTGACGG CGGAGGGGTGTTCTCGGACGAGGCACTTGAGGCATTGCTGACAGCATGTG AGGGCAACGGAAGTAAGTCGCCAAGATCGGGGCGCGAATCTGGCGAATCG AGTGTTGTTGACGCCAGGTCGAATTTGGCGCGCTCCGATGTCGTCGACAG TAGCGACGACTCGTCCCCAACGAACGTCAATGGCAAGGGAAAGGGGAAGG CGAGGACCGAAAGTGTCGGCGGAAGGAGGAACCCCCACCAGGCAAGTGCC GAAAAGGCAAAAGGGAAGGGATACCAGTTGTGGGCCCTCGGCTTCTTGCA GCGAGCCTGCTCGTATCGTGACATCCCGAGAATGTCACAACAAAAATCGA AGGAGGCGATAGCGGAGGCGTTGACCGCGAGAGACAAAAGCATGGGCAGG CCTACGCCTTTCTTCGACGATCTCGAGGCCATCGTTGAAGGTGAGCTGCT GTGGATTTGTTGCGACGAGATATTTGTCCTAGCCGTGAAGACGGAATGAG AGCAAAAATGGTCTTGACTGCTGCTGTAGGCGTGTGCATGTTGAAATTTA CACTGCTGTACGTACGTACTCGGAGTAGAATTTATCGAGAGTTTTTCAAA TTTAAATTTCAAACCAGCAGCAGCAGTAGCGAAATGACTGCCGTTGTTGA ATGTCGTGTGTTTGTCCACGTTGTCATCTTCTCGTCAACAACGGCAGTGC GTCCTCGTGGTGGTGAATGTCGCTTTTTCATTCGCGTGCGAACAGCATAA TGCTAGGGGTGTTCGCACCGGGGTGCGACATCTGGTACAACCGAGCGCTA CTAGTACCTTGTAGTTCAAAATATGTAGTTGAAAATTGAGAAGTCGCCGA CACGCAGCAGCGCCACTTCTTGCATGTCTACTTGTCCGTGCATGTTTGTA ACGTTGCCGCGTACATTTTACTGTTTTATCCGGTCAtTTTTTTTTCCGCA AATATGTCGAACCCAATGCAGGCAAACCCCGCAAGAACTCCACGGACGAG GCAATCCCCGCCGAGGTAGTTCTCGCGCTCCGGGCCACGTTGACGCTGGT TCGCGTCGACCGCAACTCGAGTACGCCCTTCAAGTTCGGGCCGAGAGTAC AACGTAGCCGACCTCTTCGCCATCATGGACGCCGAAGACGCCGTCGAGGC TGCGGCAGAGGGCGGAGGAAGTTCCGAGAGTGGTGCCACCGGGTCGTGCG GCGGCACTGCTGCGGGGGCGGGGGGTGGCGGCGCCGCTGGAGCGGGGGTT GGCACCGCGGAGCGGAAAGGGCCGCACTGCATGATGCGGCTCGTCGGCAT TCTCGTAGAGGACGACGTTCGCCCGCTGCTCATAGACAGTCGGCTTCAGG CGAATCGTGCTCAGCTTGATGCCTCTGCGGTGGGATCACGCAGCGAAGTG TGGCAAGTCGCCTCGGAACGCTTCACGGACCCTGACCACGAGGTAACACC AGTGGAGGGGGAACACCCCCTCCGCCGGTAGTGACGATGGCATGAATATG TGATGTGCCAACTTGTTTTATTGCGCTGCACCCAGTAAGCCGTGTGTATA CATTGTTTTGTTTTCATCACAGCGGTTCCAGGGCAGGTCTGACCCCGGTT GGTCATCGGCACCCAGATTCGTGTAGCACAGACACACGCGAAATTTCGCC CGCACCATGTACCTGATACCTCTCCTCTTCAACCGATCGCTCCCGACTCT TAAGGTGCGACGGATCGTCGACCACGAGATGGTCGCCCACTGCGATCCCA ACGTAATCCACCAACCGAACATTTCCGCGGAAAAGCTCTCCAAAATGTGG GCGGGGGTGAAGGCGAAGTGGAATCAGCCCCACGCAAACTGGAGGGGCAC GTCTGGCAACAATCAGCCTTGGGTGAACTTCTGCCAAGGTAAGAATGCCG TTCGAGAGTGGGAGGGAAACTCACATGCGTAGATTAAACGTTGTAAGGGG CCTTCGGCATAAACTGTTCAGCGTGTCAATTTTCTTGTCGGCCGTAGGCG AGACGCTGCCTTACCGGTCTTGTTTTGGTGATTCGATTCTGCACCGGTTC GTTTGTGTTTCTCATTTCACCTTGTACTTCGGGTGCAAGGGAACAAGTTG GGCTCACCATCCGGGTTTAGACGATCGTCAGGTCAACAAACGATTTTTTT TGCAAGGGTGTACATAGACTGCTGCCGGGCCGATTGTTCCCGGATTTATG ACGGAAGTGCTGGCACAATGATTTTCGATTGGTCACACCCTCTGGCTCGT CCCGGCACGTGAAAACAAAAACAACCGGCCCGGCCCGGCACGTGAAAAAA AAAAATCGGCTCGGCCCGGTGGAATATTCCTGGCAAAACTACCGTCCCGG CAAGAATTAAAACCAAGTTTTGGCACTCCGGCGCTACCGTTTTTTTTTTT TGTCGTCCACCCGAATTCTCCTCCCGGCCCGGCAAATTCCAATTTTAGCA GGCCATGTACACCCTTGCTTTTTGTTCGCCTTCCTCGTGCGGTGCTCGCC AATGACCTCGTTTCCCCTCACGATTAATTCTGTGAGCTTAAACCCCCTTC ATCAGCATTCGACCTCCTGACCTAGCTGTAACATCTAATCGAGGTTACAG ACTAAACAACCGGGGCGGCTCTGGGTGCATTTGAATCTTGAAAATTTCAG CACATGTAGACGTACATGGGGTGAGGCGTAGTTCTGACGAATAGCCTGTG CGCTATGCTTGGCCCCTGCTGCCTGCCCCCCCTCCCCCTCCCCGCTTTGA CCGTCCAGGCGATTCCGACATTTTCCTCGTCGGTGAAGCTATTAAAAAGT ACCCCGAATTAGACCAGGTGTGCAACGCGCTATTACCAGAAGACGTCCAG CGAGAAGACGACGGGACCGGAGCAGCAGCTGGGGAGGCGGGCGGCGCGGA ACGCAGGGCGTCAGCCAAGCGCGAGGGCGAGCGGCTACACGGTATGAACC GTGCCGGCAAGAAGAAGGCTAAAAAGGACGAGAGGGCGCAGAGCGTGGCC GACGCTACGGAGAAGGCCGTGAGTTCGGCCATTGCGGGGATGGCACCGTT GCTGGCATCGATGAAGCCCGACACCGCAAACGGGCGTCCCCAAACTGATG ATCCGGAGCGCCAGGTTGCAGAAATCGTCCTCGCCGACGAATGCATGACC GCCCATGAAAATTGGTCGAAGGAACCCGCGGAAGAAGAGAAGAAAGGAGA GGAGGGGAGCGTCTTTCGGAAGAAATTTATGAGGGAAAGGATAGAAAGTC TTGAGAAGAGAATGGCTGCAATGAAATAGGCATTTCCACGCAAGACGATT TATGGTAGCGTAGAGTTCAAATGACAAGCGCGACCTGTCGTTCATTACCA AAAAGGTGTTGTTGAACGAGTGGAATGTCTGTGGGGTTGGTGTTACTCCT GTTGCTTGCGCAGCCGGGTGTGAGTACAGCACAGAATCAGTATTGAAGTT GTTTCTGATTTTTTCATTACGTCGTCGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1:1901408..1905585+

>mRNA_P-littoralis_Contig1.442.1 ID=mRNA_P-littoralis_Contig1.442.1|Name=mRNA_P-littoralis_Contig1.442.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1302bp|location=Sequence derived from alignment at P-littoralis_Contig1:1901408..1905585+ (Pylaiella littoralis U1_48)
ATGGATGAAGACAACAGCCTTCGAACTAGTAGACCGTGTAGGACCAAGGC
TCTACCTGCAAAGCTGCAGGGCGCAGGTGAGCCAGGTGCTGCTGCTGGAC
ATGGACAAGCGCAGCTCCGGCAGCCTGCTGCTGCTGCCCTTGCTGCTACC
GGCGGGCGGCGTACTGCCGGCGGGCAGCGAGCTGCAAGCACGCAGCGTGA
ACCGGTCCGTTTGGCCAAAGCACCGGTAAGAGCAGGGAGCCCGAGGGCAC
ATGTTACCACATCCTCTCCGCCCTCAAGCCTCGGAACTTCTTTGCAGCAG
CGTTCACCGGTATCATGTGGGTCGGTAGGGGTGGAAATAGATGTTGAGAA
CGACACTGCTTTGACGGCCACGGGCACCGGTGGTCAAGCTCGAGTGCTCG
AGACGGAAGCTGGAGCAGGCACCGACAGCAGCTCTGACGGCAGCAATGAG
GTGGACGCTGACGGCGGAGGGGTGTTCTCGGACGAGGCACTTGAGGCATT
GCTGACAGCATGTGAGGGCAACGGAAGTAAGTCGCCAAGATCGGGGCGCG
AATCTGGCGAATCGAGTGTTGTTGACGCCAGGTCGAATTTGGCGCGCTCC
GATGTCGTCGACAGTAGCGACGACTCGTCCCCAACGAACGTCAATGGCAA
GGGAAAGGGGAAGGCGAGGACCGAAAGTGTCGGCGGAAGGAGGAACCCCC
ACCAGGCAAGTGCCGAAAAGGCAAAAGGGAAGGGATACCAGTTGTGGGCC
CTCGGCTTCTTGCAGCGAGCCTGCTCGTATCGTGACATCCCGAGAATGTC
ACAACAAAAATCGAAGGAGGCGATAGCGGAGGCGTTGACCGCGAGAGACA
AAAGCATGGGCAGGCCTACGCCTTTCTTCGACGATCTCGAGGCCATCGTT
GAAGGCAAACCCCGCAAGAACTCCACGGACGAGGCAATCCCCGCCGAGGT
AGTTCTCGCGCTCCGGGCCACGTTGACGCTGGTTCGCGTCGACCGCAACT
CGAGTACGCCCTTCAAGTTCGGGCCGAGAGTACAACGTAGCCGACCTCTT
CGCCATCATGGACGCCGAAGACGCCGTCGAGGCTGCGGCAGAGGGCGGAG
GAAGTTCCGAGAGTGGTGCCACCGGGTCGTGCGGCGGCACTGCTGCGGGG
GCGGGGGGTGGCGGCGCCGCTGGAGCGGGGGTTGGCACCGCGGAGCGGAA
AGGGCCGCACTGCATGATGCGGCTCGTCGGCATTCTCGTAGAGGACGACG
TTCGCCCGCTGCTCATAGACAGTCGGCTTCAGGCGAATCGTGCTCAGCTT
GA
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