mRNA_P-littoralis_Contig1.442.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE) HSP 1 Score: 296 bits (758), Expect = 1.010e-89 Identity = 161/298 (54.03%), Postives = 205/298 (68.79%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ KK R QSVA+AT A+ +A+ + PLL + + R + ++ E + AE L H+ S++ EE++K G R KFM + + LEK M
Sbjct: 39 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLLPRGGSEESEWRLKQEEEESKSAVLDTKAAEYALQKAMCADHQKCSEQIVEEKEKKRPGYQTRVKFMEQMVAMLEKEM 335
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 291 bits (744), Expect = 1.300e-85 Identity = 181/355 (50.99%), Postives = 231/355 (65.07%), Query Frame = 1
Query: 1258 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
G +Y+VADL+ M+ E+ E GG XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK Q+VA+AT A+ +A+ + PLL+ + + R + ++ E + A + L H+ +S++ EEE + G R KFM + + LEK M
Sbjct: 147 GVDYSVADLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLLSRGGSEKSEWRLKQEEEESKSAALDTKAAAYALQKAMCADHQKYSEQIVEEEGQKRPGYQTRVKFMEQMVAKLEKEM 493
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 284 bits (726), Expect = 5.410e-84 Identity = 145/221 (65.61%), Postives = 173/221 (78.28%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 2091
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+A+W+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RLH NR GKK+ K QSVA+AT A+ +AI M PLL
Sbjct: 176 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 291 bits (746), Expect = 1.440e-83 Identity = 160/299 (53.51%), Postives = 209/299 (69.90%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL----ASMKPDTANGRPQ----TDDPERQVAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+++W + RF DPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RL+ NR GKK K QSVA+AT A+ +A+ + PLL S K + + + T + + + + + L E +H +SK+ EEEK+ +G R +F+R+ + +EK M
Sbjct: 411 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLLEKVGGSEKSEWYKKKEEHACKTAEHDSKASGLALQKEMTESHAEFSKKIVEEEKEKADGYQTRVRFLRKMLAGIEKEM 708
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 280 bits (715), Expect = 1.630e-81 Identity = 154/287 (53.66%), Postives = 197/287 (68.64%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFM 2268
ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR VD E+V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAER A+AKREG RL+ NR G + KK R QSVA+AT A+ +A+ + PLL + + R + + E + AE L H+ +S++ EE++K G R KFM
Sbjct: 203 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLLPLGGSEKSEWRLKQEVEESKSAALDTKAAEYALQKAMCADHQKYSEQIVEEKEKKRPGYQTRVKFM 488
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 274 bits (701), Expect = 4.740e-78 Identity = 162/278 (58.27%), Postives = 196/278 (70.50%), Query Frame = 1
Query: 1258 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 2091
G +Y+V DL+ M+ E+ E GG XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++F QGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK QSVA+AT A+ +A+ + PLL
Sbjct: 309 GMDYSVTDLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 269 bits (688), Expect = 2.050e-77 Identity = 131/191 (68.59%), Postives = 154/191 (80.63%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 2001
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDD TG GGA+RRA+AKREG RLH NR GKK
Sbjct: 299 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 251 bits (640), Expect = 2.470e-72 Identity = 165/355 (46.48%), Postives = 213/355 (60.00%), Query Frame = 1
Query: 1258 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQ-------VAEIVLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
G +Y+VADL+ M+ ED E +S XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E V+H N+I QPNISAEK++ M + KAKWN P+ANW+ GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG G + NR G K+ KK R QSVA+AT A+ +A+ + PLL + + R + ++ E + AE L E H+ +S++ EE++ G R KFM + LEK M
Sbjct: 23 GVDYSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLLPRGGSEKSEWRLKQEEEESKSAALDTKAAEYALQKEMRADHQKFSEQIVEEKENKRPGDQTRVKFMEQMEAKLEKEM 355
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE) HSP 1 Score: 259 bits (662), Expect = 4.440e-70 Identity = 132/211 (62.56%), Postives = 163/211 (77.25%), Query Frame = 1
Query: 1429 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGT-SGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 2058
ERKGPHCMMRL GIL ED +RP +I+SRLQA R +LD SAVG R +W ++RF DP H VR+IVD E +H +PN+I QP+I AEK++K W+ KAKWN P+ANW+ + SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ K+ R QSVA+AT A+
Sbjct: 733 ERKGPHCMMRLEGILCEDSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 239 bits (609), Expect = 8.730e-65 Identity = 161/353 (45.61%), Postives = 213/353 (60.34%), Query Frame = 1
Query: 1264 EYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLLASMKPDTANGRPQTDDPERQVAEI-------VLADECMTAHENWSKEPAEEEKKGEEGSVFRKKFMRERIESLEKRM 2301
+Y+VA+LF M+ ED E GGS+ +G GS XXXXXXXXXXXX ERKGPH MMRLVGI ED + PL I+SR+QA R +LD SAV R+ +W ++RF D H VR+IVD V+H +PN+I QPN SAEK++ W+ +A WN P+ANW SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG GGAERR +AKREG RL N +SVA+A A+ +A+ + PLL + + + + + + + A + L H+ +S++ EEE+K G R + + + LEK M
Sbjct: 282 DYSVANLFDAME-EDKPELGDSAGGSAPNG--GSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLLPRGGSEKSERQLKQQEEQSKSAALDTKAAAYALQKAMCADHQKYSEQVVEEEEKKRPGYQARINVVEQMVAKLEKEM 630 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.442.1 >prot_P-littoralis_Contig1.442.1 ID=prot_P-littoralis_Contig1.442.1|Name=mRNA_P-littoralis_Contig1.442.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=434bp MDEDNSLRTSRPCRTKALPAKLQGAGEPGAAAGHGQAQLRQPAAAALAATback to top mRNA from alignment at P-littoralis_Contig1:1901408..1905585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.442.1 ID=mRNA_P-littoralis_Contig1.442.1|Name=mRNA_P-littoralis_Contig1.442.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4178bp|location=Sequence derived from alignment at P-littoralis_Contig1:1901408..1905585+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1901408..1905585+ >mRNA_P-littoralis_Contig1.442.1 ID=mRNA_P-littoralis_Contig1.442.1|Name=mRNA_P-littoralis_Contig1.442.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1302bp|location=Sequence derived from alignment at P-littoralis_Contig1:1901408..1905585+ (Pylaiella littoralis U1_48)back to top |