mRNA_P-littoralis_Contig111.83.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 363 bits (931), Expect = 2.460e-121 Identity = 194/287 (67.60%), Postives = 211/287 (73.52%), Query Frame = 1
Query: 1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRG 720
A F+ K N+WY+RFRKR GFSIRRRTSVGQKLP G+EGMAWAT+MKLR AL++RAGE DLT EQL SV A VF+ELGNMDQTPVQHEMPVETTLEK GAKDARISTGGKEKERFTL LAVMA+G +V RIIFKGTPFIPP SGKGKST PRK W D REC WIS SWKLRPNNGSI++QRP ILVLDDFKCH+DE +IA L++ ANTIVI+IPGGLTPLLQPLDRMLNKQMKRLLRG
Sbjct: 24 ALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRG 310
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 363 bits (931), Expect = 1.140e-120 Identity = 196/286 (68.53%), Postives = 209/286 (73.08%), Query Frame = 1
Query: 1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLR 717
A F+ KFN+WY+RFRKR GFSIRRRTSVGQKLP G EGMAWAT+MKLR AL+KRAGE DLTSEQL SV A VFEELGNMDQTPVQHE+PVETTLEK GAKDARISTGGKEKERFTL LAVMA+G +V RIIFKGTPF PPT SGKGKST PRK W D REC WIS SWKLRPNNGSI++QRP ILVLDDFKCH+DE FIA L++ ANTIVI IPG LTPLLQPLDRMLNKQMKRLLR
Sbjct: 24 ALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLR 309
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 353 bits (907), Expect = 2.190e-114 Identity = 192/288 (66.67%), Postives = 209/288 (72.57%), Query Frame = 1
Query: 1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGG-KEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRG 720
A +F+ KFN+WY+RFRKR GFSIRRRTSVGQKLP G+EGMAWAT+MKL AL+KRAGE DL SEQL SV A VFEE+GNMDQ PVQHEMPVETTL+K GAKDARISTGG EKERFTL LAV A+G +V RIIF+GTPFIPPT SGKGKST+PRK W D REC WIS SWKLRPNNGSI++QRP ILVLDDFKCH DE FIA L++ ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG
Sbjct: 218 AIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG 505
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE) HSP 1 Score: 364 bits (934), Expect = 2.670e-114 Identity = 189/284 (66.55%), Postives = 213/284 (75.00%), Query Frame = 1
Query: 10 FRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRG 720
FR KF NWY FR+R GFSIRRRTSVGQKLPTG+EG+A+ATLMKLR ALL+RAGE DLT QLESVAA VFEELGNMDQTPVQ EMPVETTLEKRG KDARISTGGKEK+RFT CLAVMA+G +VP RIIFKG PFIPP+ +G+ K+TQ RKG WCDARECTLW+SESW+ RPN+GS+IKQR SILVLDDF+CHR E+F+ DL+++ NT VILIPGGLTPLLQPLDRMLNK+MKRL+RG
Sbjct: 96 FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 349 bits (895), Expect = 8.530e-113 Identity = 194/300 (64.67%), Postives = 208/300 (69.33%), Query Frame = 1
Query: 1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG------------------------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRG 720
A F+ KFN+WY+RFRKR GFSIRRRTSVGQKLP G+EGMAWAT+MKLR AL+KRAGE DLTSEQL SV A VFEELGNMDQTPVQHEMPVETTLEK GAKDARISTGG+EKERFTL LAVMA+G +V RIIFKGTPFIPPT SGK KST PRK W D REC WI SWKLRPNNGSI++QRP ILVLDDFKCH+DE FIA L++ A T VI IPGGLT LLQPLDRMLNKQMKRLLRG
Sbjct: 206 ALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRG 504
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 360 bits (923), Expect = 1.750e-112 Identity = 187/282 (66.31%), Postives = 206/282 (73.05%), Query Frame = 1
Query: 16 AKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRG 720
+KF +WY+RF KR FSIRRRTSVGQKLP GHEGMAWATLMKLR ALL+RAGE DL+S QLE V +FEELGNMDQTPVQHEMPVETTLE GAKDARI+TGGKEKERFTLCLAV A+G +VPLRIIFKGTPF+PP GKGK+TQPRK WCD REC LWI +SWKLRPNNGSI++QR ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGL PL QPLDRMLNKQMKRLLRG
Sbjct: 183 SKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRG 464
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 343 bits (881), Expect = 9.560e-112 Identity = 186/313 (59.42%), Postives = 212/313 (67.73%), Query Frame = 1
Query: 1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTG--------------------------GKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRG 720
A F++KF +WY+RFRKR FSIRRRTSVG +LP GHEGMAWATLMKLR ALL+RAGE DL+S QLE V +F++LGNMDQTPVQ+EMPVETTLEK GAKDARI+TG GKEKERFTLCLAV A+G++VPLRIIFKGTPF+PP GKGK+TQPRK WCD RE LWI +SWKLRPNNGS+++QR ILVLDDFKCH+D+ FIA L+++ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG
Sbjct: 111 ALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG 423
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 344 bits (882), Expect = 2.020e-111 Identity = 191/295 (64.75%), Postives = 203/295 (68.81%), Query Frame = 1
Query: 1 AEEFRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKL--------RPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRG 720
A F+ KFN+WY+RFRKR GFSIRRR SVGQKLP G+EGMAWAT+ KLR AL+KRAGE DLTSEQ SV A VFEELGNMDQTPVQHEMPVETTLE G KDARISTGGKEKERFTL LAVMA+G V IIFKGTPFIPPT SGKGKST PRK W +EC WI SWKL RPNNGSI++QRP ILVLDDFKCH+DE FIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG
Sbjct: 178 ALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG 472
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 328 bits (840), Expect = 2.600e-105 Identity = 183/289 (63.32%), Postives = 202/289 (69.90%), Query Frame = 1
Query: 1 AEE---FRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLR 717
AEE FR KF NWY RFR+R G SIRRRTSVGQKLPTG+EG+A+ATLMKLR ALL+RAGE DL+ QLESVA VFEELGNMDQTPVQ EMPVETTLEK GAKDARISTGGKEKERFTLCLAVMA+G +VPLRIIFKG PFIPP+ + +GK+TQPRKG W DA ECTLW+SESW RPN+GS+IKQR SILVLDDF+ NT VILIPGGLTPLLQPLDRML+K+MKRL+R
Sbjct: 194 AEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMR 468
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Match: A0A6H5JB72_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB72_9PHAE) HSP 1 Score: 324 bits (830), Expect = 9.550e-105 Identity = 195/383 (50.91%), Postives = 222/383 (57.96%), Query Frame = 1
Query: 1 AEE---FRAKFNNWYRRFRKRRGFSIRRRTSVGQKLPTGHEGMAWATLMKLRAALLKRAGE------------------DLTSEQLESVAATVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKERFTLCLAVMANGSRVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-------------------------------------------------------------------------------------------WCDARECTLWISESWKLRPNNGSIIKQRPSILVLDDFKCHRDEAFIADLQKKANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGCTPPTPPRQSPTPRRGS*SRRDVGRCRRGAR 813
AEE F+ KF NW+ RFR+RRG SIRR T+VGQKLPTG+EG+A+ATLMKLR ALL+RAGE DL+ QLESVAA VFEELGNMDQTPVQ EMPVETTLEKRGAKDARISTGGKEK+RFTLCLAVMA+G +VPL+IIFKG PFIPP+ +G+G++TQPRKG WCDAREC LW+SESW SILVLDDF+CHR E+FI DL+++ NTIVILIPGGLTPL QPLDRMLNK+MKRL+RG PRR S +RR V CRRGAR
Sbjct: 116 AEETLAFKTKFKNWHHRFRERRGVSIRRHTNVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRHPPAPDESPIKGKDLSPAQLESVAAEVFEELGNMDQTPVQQEMPVETTLEKRGAKDARISTGGKEKDRFTLCLAVMADGGKVPLQIIFKGKPFIPPSTAGRGRNTQPRKGSIAAESLPANRTKFGYPKDRFTLCLAVMADGGKVPLQIIFKGKPFIPPSTAGRGRNTQPRKGSIAAESLPANRTKFGYPVSGMSFGVQEKNWCDARECILWLSESW--------------SILVLDDFRCHRSESFIEDLRRRTNTIVILIPGGLTPLFQPLDRMLNKEMKRLMRGRYTQYMASAIADPRRASFNRRGVCSCRRGAR 484 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig111.83.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig111.83.1 >prot_P-littoralis_Contig111.83.1 ID=prot_P-littoralis_Contig111.83.1|Name=mRNA_P-littoralis_Contig111.83.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp MAWATLMKLRAALLKRAGEDLTSEQLESVAATVFEELGNMDQTPVQHEMPback to top mRNA from alignment at P-littoralis_Contig111:420189..421448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig111.83.1 ID=mRNA_P-littoralis_Contig111.83.1|Name=mRNA_P-littoralis_Contig111.83.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1260bp|location=Sequence derived from alignment at P-littoralis_Contig111:420189..421448+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig111:420189..421448+ >mRNA_P-littoralis_Contig111.83.1 ID=mRNA_P-littoralis_Contig111.83.1|Name=mRNA_P-littoralis_Contig111.83.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig111:420189..421448+ (Pylaiella littoralis U1_48)back to top |