prot_P-littoralis_Contig1109.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1109.5.1
Unique Nameprot_P-littoralis_Contig1109.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length164
Homology
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BLAST of mRNA_P-littoralis_Contig1109.5.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.210e-25
Identity = 59/105 (56.19%), Postives = 70/105 (66.67%), Query Frame = 0 
Query:    1 IGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDF--HVADTSGEIMMAVTREETSRRIRAASRNTHKSVLCPR 103
            + PRN SQD+ EHRFSH R   GTHRNPTA+E K RS  GD+ RA NGK RRN++ N NAR G DF  H       I++AVT+ ET + +RA  RNT   VLCPR
Sbjct:  172 LSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPR 276
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1109.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5I6_9PHAE1.210e-2556.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1109contigP-littoralis_Contig1109:68643..69348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1109.5.1mRNA_P-littoralis_Contig1109.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1109 68401..69348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1109.5.1 ID=prot_P-littoralis_Contig1109.5.1|Name=mRNA_P-littoralis_Contig1109.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp
IGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKT
RRNSNINANARVGQDFHVADTSGEIMMAVTREETSRRIRAASRNTHKSVL
CPRSASRPPSYASFRKRRPDHNPEMDHPNPYKYGFWRDGPKRGNGERRCS
CIMYPSSPQKLAR*
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