mRNA_P-littoralis_Contig1106.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE) HSP 1 Score: 236 bits (602), Expect = 5.860e-72 Identity = 123/204 (60.29%), Postives = 152/204 (74.51%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADATEKAVSSATAGMAPLL 612
D +RPL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD + V+H +PN+I QPNISAEK++KMW+ AKWN ANW SGNNQP ++FCQGD+D +++G AI+KYPELDQ CN LLPED QREDDGTG G TGGAERRA+AKREG RL+ R G K+ KK R QSVA+AT A+ +A + PLL
Sbjct: 56 DSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLL 258
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 234 bits (598), Expect = 2.200e-70 Identity = 123/204 (60.29%), Postives = 152/204 (74.51%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADATEKAVSSATAGMAPLL 612
D +RPLLI+SRLQA R LD S+VG R+++W + RFRDPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA AKWNQ +A+W SGNNQP ++FCQG +D +++G AI+KYPEL+Q CN LLPE QREDDGTG TGGA+RRA+AKREG RLH R GKK+ K QSVA+AT A+ +A M PLL
Sbjct: 193 DAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 229 bits (583), Expect = 2.810e-67 Identity = 120/204 (58.82%), Postives = 149/204 (73.04%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADATEKAVSSATAGMAPLL 612
D +RPL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD + V+H +PN+I QPNISAEK++KMW+ AKWN +ANW SGNNQP ++FCQGD+D +++G AI+KYPELDQ CN LP D QREDDGTG G TGGAERRASAKREG RL R G K+ KK Q+VA+AT A+ +A + PLL
Sbjct: 214 DSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLL 416
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 226 bits (577), Expect = 1.790e-66 Identity = 120/204 (58.82%), Postives = 150/204 (73.53%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADATEKAVSSATAGMAPLL 612
D +RPL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR VD ++V+H +PN+I QPNISAEK++KMW+ AKWN +ANW SGNNQP ++FCQGD+D +++G AI+KYPELDQ CN LLPED QREDDGTG G TGGAER A+AKREG RL+ R G + KK R QSVA+AT A+ +A + PLL
Sbjct: 220 DSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLL 422
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 230 bits (586), Expect = 7.860e-66 Identity = 122/204 (59.80%), Postives = 150/204 (73.53%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADATEKAVSSATAGMAPLL 612
D +RPLLI+SRLQA R LD S+VG R+ +W + RFRDPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA AKWNQ +ANW SGNNQP ++FCQG +D +++G AI+KYPEL+Q CN LLPE QREDDGTG TGGA+RRA+AKREG RL+ R GKK K QSVA+AT A+ +A + PLL
Sbjct: 428 DAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLL 630
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 226 bits (577), Expect = 3.090e-65 Identity = 120/204 (58.82%), Postives = 148/204 (72.55%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADATEKAVSSATAGMAPLL 612
D +RPL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD + V+H +PN+I QPNISAEK++KMW+ AKWN +ANW SGNNQP ++F QGD+D +++G AI+KYPELDQ CN LP D QREDDGTG G TGGAERRASAKREG RL R G K+ KK QSVA+AT A+ +A + PLL
Sbjct: 376 DSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 223 bits (567), Expect = 8.250e-65 Identity = 110/174 (63.22%), Postives = 134/174 (77.01%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKK 522
D +RPLLI+SRLQA R LD S+VG R+++W + RFRDPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA AKWNQ +ANW SGNNQP ++FCQG +D +++G AI+KYPEL+Q CN LLPE QREDD TG TGGA+RRA+AKREG RLH R GKK
Sbjct: 316 DAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.010e-59 Identity = 112/190 (58.95%), Postives = 142/190 (74.74%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGT-SGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADAT 567
D +RP +I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD + +H +PN+I QP+I AEK++K W+ AKWN +ANW + SGNNQP ++FCQGD+D +++G AI+KYPELDQ CN LLPED QREDDGTG G TGGAERRA+AKREG RL+ R G K+ K+ R QSVA+AT
Sbjct: 750 DSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNVRKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEAT 938
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 195 bits (496), Expect = 2.720e-53 Identity = 95/165 (57.58%), Postives = 119/165 (72.12%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERL 495
D + PL I+SR+QA R +LD SAV R+ +W ++RFRD H VR+IVD V+H +PN+I QPN SAEK++ W+ A WN +ANW+ SGNNQP V+F QGD+D +++G A +KYPELDQ CN LLPED QREDDGTG TGGAERR +AKREG RL
Sbjct: 351 DSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNVRKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARL 515
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.770e-52 Identity = 102/204 (50.00%), Postives = 131/204 (64.22%), Query Frame = 1
Query: 1 DDVRPLLIDSRLQANRAQLDASAVGSRSKVWQVASERFRDPDHEVRRIVDHKMVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNFCQGDSDIFLVGEAIKKYPELDQACNALLPEDVQREDDGTGAAAGETGGAERRASAKREGERLHGMKRAGKKKAKKDERAQSVADATEKAVSSATAGMAPLL 612
D +RPL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD + V+H N+I QPNISAEK++ M + AKWN +ANW GNNQP ++FCQGD+D +++G A++KYPELDQ CN LLPED QREDD TG G + R G K+ KK R QSVA+AT A+ +A + PLL
Sbjct: 90 DSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLL 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1106.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1106.11.1 >prot_P-littoralis_Contig1106.11.1 ID=prot_P-littoralis_Contig1106.11.1|Name=mRNA_P-littoralis_Contig1106.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=187bp MVAHCDPNVIHQPNISAEKLSKMWAGVAAKWNQSHANWSGTSGNNQPLVNback to top mRNA from alignment at P-littoralis_Contig1106:39319..41903+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1106.11.1 ID=mRNA_P-littoralis_Contig1106.11.1|Name=mRNA_P-littoralis_Contig1106.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2585bp|location=Sequence derived from alignment at P-littoralis_Contig1106:39319..41903+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1106:39319..41903+ >mRNA_P-littoralis_Contig1106.11.1 ID=mRNA_P-littoralis_Contig1106.11.1|Name=mRNA_P-littoralis_Contig1106.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=561bp|location=Sequence derived from alignment at P-littoralis_Contig1106:39319..41903+ (Pylaiella littoralis U1_48)back to top |