mRNA_P-littoralis_Contig1103.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5JH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH50_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.120e-43 Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 1
Query: 1 QPLPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWPGKGKMASCVVEAF 297
+PL DMSHA RKKAAA+HP LCG+ HA +IAAV+TQDV EKWN+TTGNK+RNQA ++GAE +NARGAGVQL RAECFT ACR L PG G+M VVEAF
Sbjct: 133 EPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQACYNGAEAVNARGAGVQLPRAECFTRACRALLPGSGEMDPLVVEAF 231
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5K6T9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T9_9PHAE) HSP 1 Score: 127 bits (319), Expect = 3.120e-34 Identity = 59/98 (60.20%), Postives = 70/98 (71.43%), Query Frame = 1
Query: 7 LPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWPGKGKMASCVVEAFS 300
+P M A+ K AAAEHP LCG+ HA +IAAVK QDV+ + T NK+RNQA + G MNARG GVQL+R ECFTH CR LWPG G+ + VVEAFS
Sbjct: 1 MPSMKAAAAKVAAAEHPGLCGVYHAHIIAAVKIQDVLARSGSTAANKYRNQACYDGEMAMNARGQGVQLKREECFTHPCRALWPGSGESDASVVEAFS 98
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5JAI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAI4_9PHAE) HSP 1 Score: 126 bits (317), Expect = 7.920e-34 Identity = 59/96 (61.46%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 7 LPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWPGKGKMASCVVEA 294
+P M+ A+ KKAAAEHP LCG+ HA +IAAV+T+DV + T NKFRNQA + GA MNARG GVQL+RAECFTHA R +WPG +M + VVEA
Sbjct: 1 MPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHAGRAVWPGNEEMEASVVEA 96
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5KUP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP8_9PHAE) HSP 1 Score: 123 bits (309), Expect = 6.020e-32 Identity = 56/91 (61.54%), Postives = 69/91 (75.82%), Query Frame = 1
Query: 1 QPLPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWPGKGKM 273
+P+P M+ A+ KKAAAEHP LCG+ HA +IAAV+T+DV + T NKFRNQA + GA MNARG GVQL+RAECFTHA R +WPG +M
Sbjct: 62 EPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSRSGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHARRAVWPGNEEM 152
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5JXX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX9_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.670e-31 Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 1
Query: 1 QPLPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWPGKGKMASCV 285
+P+P M+ A+ KKAAAEHP LCG+ HA +IAAV+T+DV + T NKFRNQA + G MN RG GVQL+RA+CFTHACR +WPG +M + V
Sbjct: 64 EPMPSMALAAAKKAAAEHPGLCGVHHAHIIAAVRTEDVTSRSGFTAANKFRNQACYDGGMAMNTRGKGVQLKRADCFTHACRAVWPGNEEMEASV 158
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5K6B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B0_9PHAE) HSP 1 Score: 121 bits (303), Expect = 3.060e-30 Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 1 QPLPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWPGKGKM 273
+P+P M+ A+ KKAAAEHP LCG+ HA +IAAV+T+DV + T NKFRNQA + GA MNA G GVQL+RAECFTHA R +WPG +M
Sbjct: 131 EPMPSMALAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSQSGSTAANKFRNQACYDGAMAMNAHGKGVQLKRAECFTHARRAVWPGNEEM 221
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5KH61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH61_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.580e-19 Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 1
Query: 1 QPLPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQ 159
+PL DMSHA RKKAAA+HP LCG+ HA +IAAV+TQDV EKWN+TTGNK+RNQ
Sbjct: 64 EPLEDMSHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEKWNQTTGNKYRNQ 116
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5KQB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB2_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 6.040e-17 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 1 QPLPDMSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASFHGAETMNARGAGV 207
+P+P M+ ++ K AAAEHP LCG+ HA ++AAVKTQDV + T GNK+RNQA GA TMNARG G
Sbjct: 64 EPMPSMAPSAAKVAAAEHPGLCGVYHAHILAAVKTQDVQARSGSTAGNKYRNQACCDGAITMNARGRGA 132
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5KJS7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS7_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 5.220e-16 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 4 PLPDMSHASRKKAAAE-HPDLCGLCHADVIAAVKTQDVVEK--WNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWPGKGKMASCVVEAFSL 303
PLPD+ ++AA + H LCG HA+ IA + V E+ E T + RNQA + +NARG GVQLRR ECFT ACR +WP + V+ A S+
Sbjct: 96 PLPDIGKLPERQAAVQQHAGLCGKYHAEHIANIDVTMVEERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACRAVWPDDQPLPVAVLAALSM 198
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Match: A0A6H5K3W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W2_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.230e-13 Identity = 41/88 (46.59%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 4 PLPDMSHASRKKAAAE-HPDLCGLCHADVIAAVKTQDVVEK--WNETTGNKFRNQASFHGAETMNARGAGVQLRRAECFTHACRTLWP 258
PLPD+S +AAA+ H CG H + IA + V E+ E T + RNQA + +NARG GVQLRR ECFT ACR +WP
Sbjct: 200 PLPDISKLPEMQAAAQQHAGSCGKYHGEHIANIDVTMVKERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACRAVWP 287 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1103.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1103.10.1 >prot_P-littoralis_Contig1103.10.1 ID=prot_P-littoralis_Contig1103.10.1|Name=mRNA_P-littoralis_Contig1103.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=97bp MSHASRKKAAAEHPDLCGLCHADVIAAVKTQDVVEKWNETTGNKFRNQASback to top mRNA from alignment at P-littoralis_Contig1103:39713..40880+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1103.10.1 ID=mRNA_P-littoralis_Contig1103.10.1|Name=mRNA_P-littoralis_Contig1103.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1168bp|location=Sequence derived from alignment at P-littoralis_Contig1103:39713..40880+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1103:39713..40880+ >mRNA_P-littoralis_Contig1103.10.1 ID=mRNA_P-littoralis_Contig1103.10.1|Name=mRNA_P-littoralis_Contig1103.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=291bp|location=Sequence derived from alignment at P-littoralis_Contig1103:39713..40880+ (Pylaiella littoralis U1_48)back to top |