mRNA_P-littoralis_Contig110.63.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A6H5J7N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N0_9PHAE) HSP 1 Score: 411 bits (1056), Expect = 5.110e-144 Identity = 201/229 (87.77%), Postives = 209/229 (91.27%), Query Frame = 2
Query: 44 MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKVNELDYWRENREHVEKMEKLKGEKKKERQRDAQIRKG 730
MGNK P PPPPSGER+ RCKELFML NENIE WEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNV+NNIQGAMSHLQLDE+GRLPFDSFKIMNK+FPQVLYPVFRLQQSTQRA+LGN WWK KVNEL +WRENREH +KERQR+AQIRKG
Sbjct: 1 MGNKIPGPPPPSGERVARCKELFMLTNENIEALWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVTNNIQGAMSHLQLDEHGRLPFDSFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKNKVNELGFWRENREHXXXXXXXXXXXRKERQRNAQIRKG 229
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: D8LMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG3_ECTSI) HSP 1 Score: 336 bits (862), Expect = 1.760e-115 Identity = 160/170 (94.12%), Postives = 166/170 (97.65%), Query Frame = 2
Query: 113 MLKNENIEGFWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKV 622
ML NENIE WEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLME+EELHHFIKVLHSSNV+NNIQGAMSHLQLDE+GRLPFDSFKIMNK+FPQVLYPVFRLQQSTQRA+LGN WWKKK+
Sbjct: 1 MLTNENIEALWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKVLHSSNVTNNIQGAMSHLQLDEHGRLPFDSFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKKKM 170
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A835Z730_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z730_9STRA) HSP 1 Score: 202 bits (515), Expect = 1.350e-62 Identity = 93/171 (54.39%), Postives = 127/171 (74.27%), Query Frame = 2
Query: 143 WEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQ-AVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKVNELDYWRENR 652
W++FK+ D +G IS +F+ ++ E ++ G A+F L+D +D + +EFGEFVQ AVCTF C +ML+F FMVYDKD+SG+ME+E+LH FI LH+S+VSNN+Q AM L LDE GRLPFDSFK++NK +PQV+YP+FRLQQ+T R V+G WW K+ L+Y R +R
Sbjct: 1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHR 171
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A7S2D7S8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7S8_9STRA) HSP 1 Score: 180 bits (456), Expect = 4.500e-52 Identity = 80/192 (41.67%), Postives = 124/192 (64.58%), Query Frame = 2
Query: 44 MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKK 619
MGN P + +R+ R E+ L +I+GFW VF++ D R G+++ + FF I+QE RN FGNAIF L+D ED + LEFGEF+Q V T+CCF ++L+FCF ++D++++G ++ +EL F+ VLH+ N++ A ++ G+ F F+ +NKDFP VLYP FR+QQ+ ++G WW++K
Sbjct: 1 MGNSAPV----ADDRVQRAAEMVKLNVSDIKGFWNVFRKCDYDRIGIVATEDFFTKIVQEGRNMFGNAIFELIDAEDPDKLEFGEFLQGVVTYCCFDELEILQFCFFIFDREKNGYIDQDELKFFVDVLHNEQQVANVRTAFQSIKFQTDGKFDFPEFQKLNKDFPTVLYPAFRMQQNMMLNIMGEDWWRQK 188
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A2R5GWK3_9STRA (Calmodulin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWK3_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.100e-43 Identity = 72/189 (38.10%), Postives = 119/189 (62.96%), Query Frame = 2
Query: 44 MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWW 610
MGNK P P +R+ + ++ L + I FW +F+++D G I + F+ +I+EER FG+++F LVD + TL+F EFVQ + T+ F D+LKFCF V+DKD++G ++ +ELH +++LH +N ++N + A+++ + G++ F+ F+ MN FPQ+L+P FR+QQ+ LG WW
Sbjct: 1 MGNKIPVP----DDRLQKTIDMLKLSKKEINKFWRIFQKYDRDHGGTIDVEEFYR-LIEEERTVFGDSLFELVDIDCSGTLDFSEFVQTIATYALFARVDILKFCFFVFDKDKNGYIDSDELHALVEMLHGNNPTSNCRTALANFDTNSDGKIDFEEFQAMNVRFPQLLHPAFRMQQNMMINTLGEQWW 184
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A8J2S6B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6B5_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.740e-40 Identity = 75/211 (35.55%), Postives = 126/211 (59.72%), Query Frame = 2
Query: 71 PPSGERITRCKELFMLKNENIEGFWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKVNELDYWRE-------NREHVEKMEKLK 682
P + +RI + + F LK ++I W +FK+ D +R +I+ F++ I+ R F + +F L++ D E+++FGEFV AV T+C F + ++LKFCF V+D+D+ G + EE+ F+ +H + +S N++ A+ +L+ + G+ F+ FK M+ +P VL+P FRLQ + +A+ G +W+ K EL +E NRE EK E K
Sbjct: 14 PTADDRIAKAMQTFNLKEKDIRVLWHMFKKHDKERRSIIAISDFYDKIVFVPRTIFCDGLFDLIEAADSESIDFGEFVAAVTTYCFFEIPEVLKFCFFVFDRDKKGFITQEEMRLFVDAMHGNEMSTNVEFALDNLKYRKDGKFDFEEFKGMHHLYPSVLFPAFRLQNAMMQAMGGEQFWESKKLELSMQKEDERKREANREAREKAEAYK 224
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A7S1UH45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH45_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.270e-38 Identity = 78/209 (37.32%), Postives = 118/209 (56.46%), Query Frame = 2
Query: 44 MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFDLKREGLISRQAFFEGII--QEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKVNELDYWRENREHVE 664
MG PP ERI + + + + I W+ F+ +D G IS+ FF I +E +FGNAI L D +DE TL+FG+F Q TF F +ML+FCF V+DKD++G M+ +EL+ F+ ++ + V +NI + L DE GRL + F M++ FP VLYPVF+ Q + + V+G WW +++ L R+++E E
Sbjct: 1 MGGGHSHPPIDDDERILKVVDTLEMTSNEIGMLWDAFRAYDHNAVGSISKIDFFCNICDQREWETDFGNAILELCDVKDEGTLDFGQFTQICGTFGAFQTKEMLQFCFFVFDKDKNGHMDEDELNAFVADIYGNAVPSNILSVIKGLNFDEDGRLYYPQFAAMHRQFPAVLYPVFQFQTNLRTNVMGAKWWNQRLARLRMDRDDKEAEE 209
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: K3WTK6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTK6_GLOUD) HSP 1 Score: 139 bits (350), Expect = 8.680e-36 Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 2
Query: 44 MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFD-----------------------LKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKVNELDYWRENREHVEKMEKL 679
MG A P ER+ +C L++ ++ + F ++D + G I R F++ I E+ +EFG+AIF L+D ++ L+F E+V A+ FC D+LKFCF V+D DR+G +E EL H +++LH ++N++ A++ + G++ FD FK +N P +LYP FR+QQ+ + +G SWW+KK+ EL HVEK ++L
Sbjct: 1 MGGVFSAQVPVPDERMLQCIVKLKLEDSDLRTLYGRFSKYDQEVTSCLWFLIVSAAGGQCGALIFSKSGTIDRSEFYKSI-DEKNSEFGDAIFALIDEDNSGVLDFSEYVDALGKFCILSKEDILKFCFNVFDSDRNGTIEGTELTHLLEILHEDGQTSNMKQALASFDFNGDGKIDFDEFKQLNGLLPSLLYPAFRIQQNMRIFTMGESWWRKKIEEL--------HVEKEKEL 226
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A6A3K789_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K789_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.310e-35 Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 2
Query: 44 MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFDLK-------REGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQGAMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKVNEL 631
MG + P ER+ L +++ + F ++D + + G I R F+ I E+ +EFG+AIF L+D ++ L+F E+V+A+ FC DMLKFCF V+D D++G +E EEL H +++LH+ ++N++ A+ + G++ F FK +N FP +LYP FR+QQ+ + LG WW++K+ EL
Sbjct: 1 MGGMLSSQVPVPDERMQHMITKLKLTAKDLRVLYGRFSRYDKEVLRSLTCKSGTIDRSEFYTSI-DEKHSEFGDAIFALIDEDNSGVLDFSEYVEALGKFCLLNKEDMLKFCFNVFDDDKNGTIEGEELTHLLEILHADEQTSNMKHALKTFDFNGDGKIDFAEFKQLNTQFPSLLYPAFRIQQNMKIFTLGEKWWERKIEEL 202
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Match: A0A7S2C3E2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3E2_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.460e-35 Identity = 75/221 (33.94%), Postives = 123/221 (55.66%), Query Frame = 2
Query: 44 MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVSNNIQG----AMSHLQLDEYGRLPFDSFKIMNKDFPQVLYPVFRLQQSTQRAVLGNSWWKKKV----NELDYWRENREHVEKMEKLK 682
MG P P S R + EL + + + FW F+ D K G + F++ +E+R+ FG+AIF L+D +L+FGEFV AV T+C F +ML+FCF ++DKD++G +E EEL + +L+ ++ ++G A+ L ++ G++ F FK N+ FP + YP FR+Q + + G++WW+KK +E D R E+ ++ EK +
Sbjct: 1 MGAANSVPTPDS--RTLKAMELGHINMKELGIFWSAFRSIDKKLTGSVDISDFYK-FFEEKRSIFGDAIFELIDCNQSGSLDFGEFVHAVVTYCLFEQDEMLRFCFYIFDKDKNGYIEQEELRWMVNILYGLGPTDKLKGNTKVAVDRLDFNDDGKVDFKEFKEFNRSFPALFYPAFRIQVNMINLIAGDAWWEKKKRWLQDEKDRKRAREEYSKRKEKAR 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig110.63.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig110.63.1 >prot_P-littoralis_Contig110.63.1 ID=prot_P-littoralis_Contig110.63.1|Name=mRNA_P-littoralis_Contig110.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp MGNKTPAPPPPSGERITRCKELFMLKNENIEGFWEVFKQFDLKREGLISRback to top mRNA from alignment at P-littoralis_Contig110:301879..305600+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig110.63.1 ID=mRNA_P-littoralis_Contig110.63.1|Name=mRNA_P-littoralis_Contig110.63.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3722bp|location=Sequence derived from alignment at P-littoralis_Contig110:301879..305600+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig110:301879..305600+ >mRNA_P-littoralis_Contig110.63.1 ID=mRNA_P-littoralis_Contig110.63.1|Name=mRNA_P-littoralis_Contig110.63.1|organism=Pylaiella littoralis U1_48|type=CDS|length=687bp|location=Sequence derived from alignment at P-littoralis_Contig110:301879..305600+ (Pylaiella littoralis U1_48)back to top |