mRNA_P-littoralis_Contig11.192.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 130 bits (326), Expect = 2.580e-34 Identity = 60/69 (86.96%), Postives = 64/69 (92.75%), Query Frame = 2
Query: 2 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
KWR LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAMTYQKQERLDYVFFTCCILHN
Sbjct: 305 KWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHN 373
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 122 bits (305), Expect = 4.040e-32 Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = 2
Query: 2 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
KW+ LIEP+KYP++E+D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHN
Sbjct: 181 KWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHN 249
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5JZL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL5_9PHAE) HSP 1 Score: 117 bits (292), Expect = 7.350e-32 Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 2
Query: 5 WRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
W+ LIEP+KYP++E D+ F RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHN
Sbjct: 18 WQILIEPSKYPLSENDLLFLKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHN 85
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5JXJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ4_9PHAE) HSP 1 Score: 111 bits (278), Expect = 2.800e-30 Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 2
Query: 17 IEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
+EPTKYP++E DI FS RLESVRKDVECFFGILK RFRILKL M Y +QER+D VFFTCCILHN
Sbjct: 1 MEPTKYPLSENDILFSKRLESVRKDVECFFGILKGRFRILKLVMAYHEQERIDNVFFTCCILHN 64
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 115 bits (287), Expect = 9.120e-30 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 2
Query: 2 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
KW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHN
Sbjct: 136 KWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHN 204
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5L8U1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8U1_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.280e-29 Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 2
Query: 17 IEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
+EPT+YP++E+DI FS RLESVRKDVECFFGILK RFRILKLAM Y +QER+D VFFTCCILHN
Sbjct: 1 MEPTEYPLSEKDILFSKRLESVRKDVECFFGILKGRFRILKLAMAYPEQERIDNVFFTCCILHN 64
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 116 bits (291), Expect = 2.330e-29 Identity = 54/69 (78.26%), Postives = 60/69 (86.96%), Query Frame = 2
Query: 2 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
KW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHN
Sbjct: 291 KWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHN 359
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 114 bits (286), Expect = 6.820e-29 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 2
Query: 2 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
KW+ L+EPTKYP++E DI FS RLESVRKDVECFFGILK FRI K+AM Y +QER+D VFFTCCILHN
Sbjct: 276 KWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHN 344
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 109 bits (272), Expect = 5.410e-28 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 2
Query: 2 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
KW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K FRILKL++ Y KQE +D VFFTCCILHN
Sbjct: 93 KWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHN 161
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.790e-27 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 2
Query: 2 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHN 208
KW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHN
Sbjct: 334 KWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHN 402 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig11.192.1 >prot_P-littoralis_Contig11.192.1 ID=prot_P-littoralis_Contig11.192.1|Name=mRNA_P-littoralis_Contig11.192.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=70bp QVAYVDRAHQIPDNRGRHSVLGEVGERAEGCGVLFRYPEGPLQNTQARHDback to top mRNA from alignment at P-littoralis_Contig11:1000098..1000307+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig11.192.1 ID=mRNA_P-littoralis_Contig11.192.1|Name=mRNA_P-littoralis_Contig11.192.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=210bp|location=Sequence derived from alignment at P-littoralis_Contig11:1000098..1000307+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig11:1000098..1000307+ >mRNA_P-littoralis_Contig11.192.1 ID=mRNA_P-littoralis_Contig11.192.1|Name=mRNA_P-littoralis_Contig11.192.1|organism=Pylaiella littoralis U1_48|type=CDS|length=210bp|location=Sequence derived from alignment at P-littoralis_Contig11:1000098..1000307+ (Pylaiella littoralis U1_48)back to top |