mRNA_P-littoralis_Contig11.191.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.260e-70 Identity = 104/123 (84.55%), Postives = 113/123 (91.87%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
IL RGN FGSIY LSWMS+ VQK FH+FC+HFATEMYD+HI+LPS+ NGELD+VMG+YEKLGFPGAMGSTDVTHI WSRCPYNQ RSYTGKEGKPTVGYQVTV+H GRVLAVTEGFTGSTND
Sbjct: 134 ILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTND 256
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 206 bits (523), Expect = 4.270e-63 Identity = 94/123 (76.42%), Postives = 104/123 (84.55%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
IL RGNCF SIY +SWMS+ VQ FHKFCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI WS+CPYN ARSYTGKEG PTVGYQVTV+H GR +AVTEGFT STND
Sbjct: 105 ILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTND 227
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 202 bits (513), Expect = 2.040e-61 Identity = 91/123 (73.98%), Postives = 102/123 (82.93%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
IL RGNCF SIY +SWMS+ VQ FH FCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI W++CPYN RSYTGKEG PT+GYQVTV+H GR AVTEGFTGSTND
Sbjct: 132 ILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTND 254
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.760e-60 Identity = 90/123 (73.17%), Postives = 105/123 (85.37%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
IL RGNCF SIY +SWMS+ VQ FHKFC+HFA EMYD+ I+LP++ +G+LD VM +Y++LGF GA+GS DVTHIAWSRCPYNQARSYTGKEG PT+ YQVTVDH GR +AVTEGFTGSTND
Sbjct: 92 ILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTND 214
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 186 bits (471), Expect = 4.720e-57 Identity = 83/109 (76.15%), Postives = 92/109 (84.40%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGR 327
IL RGNCF SIY +SWMS+ VQ FHKFCKHFA EMYD+HIYLPS+ NGELD VM +Y++LGF GAMGS DVTHI WS+CPYN ARSYTGKEG PTVGYQVTV+H GR
Sbjct: 132 ILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGR 240
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 177 bits (448), Expect = 1.060e-51 Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
IL+RGN F IY +S++S V TFH+FCK+FA E+YD+++YLP+ +L KVM +Y+++GFPGA+GSTDVTHI W CPYNQAR YTGKEGKPTV +QVTVDH+GRVLAVT GFTG+TND
Sbjct: 90 ILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATND 210
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 177 bits (448), Expect = 6.960e-51 Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
IL+RGN F IY +S++S V TFH+FCK+FA E+YD+++YLP+ +L KVM +Y+++GFPGA+GSTDVTHI W CPYNQAR YTGKEGKPTV +QVTVDH+GRVLAVT GFTG+TND
Sbjct: 181 ILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATND 301
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 169 bits (428), Expect = 4.630e-48 Identity = 82/123 (66.67%), Postives = 95/123 (77.24%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
ILARGNCF IY +S++S TFH+F ++FA EMY +HI+LP+ + KVM +Y++LGF GA GSTDVTHI W CPYNQARSYTGKEG PTV YQVTVDHT RVLAVT GFTGSTND
Sbjct: 165 ILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTND 285
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 163 bits (413), Expect = 7.580e-48 Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
IL RGNCF I LS MS + TFHKFCKHFA E++++HIYLP+ D+VM Y+KLG GA+GSTDVTHI W CP+ RSYTGKEG PT+ YQVTVDH GR +A+T GFTG+TND
Sbjct: 10 ILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPT--GSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATND 130
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.050e-46 Identity = 75/123 (60.98%), Postives = 93/123 (75.61%), Query Frame = 1
Query: 1 ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGELDKVMGEYEKLGFPGAMGSTDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVTVDHTGRVLAVTEGFTGSTND 369
+L +GNCF + LS MS ++ Q TFHKFC+HFA EM+D+HIYLP+ LD+VMG + +LG+ GA GSTDVTHI W+ CP+ RS+TGKEG PT+ Y VTVDH GR LAVT GFTG+TND
Sbjct: 43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT--GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATND 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig11.191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig11.191.1 >prot_P-littoralis_Contig11.191.1 ID=prot_P-littoralis_Contig11.191.1|Name=mRNA_P-littoralis_Contig11.191.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp ILARGNCFGSIYMLSWMSSTVVQKTFHKFCKHFATEMYDDHIYLPSDGNGback to top mRNA from alignment at P-littoralis_Contig11:999446..999815+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig11.191.1 ID=mRNA_P-littoralis_Contig11.191.1|Name=mRNA_P-littoralis_Contig11.191.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=370bp|location=Sequence derived from alignment at P-littoralis_Contig11:999446..999815+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig11:999446..999815+ >mRNA_P-littoralis_Contig11.191.1 ID=mRNA_P-littoralis_Contig11.191.1|Name=mRNA_P-littoralis_Contig11.191.1|organism=Pylaiella littoralis U1_48|type=CDS|length=369bp|location=Sequence derived from alignment at P-littoralis_Contig11:999446..999815+ (Pylaiella littoralis U1_48)back to top |