prot_P-littoralis_Contig1096.21.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1096.21.1
Unique Nameprot_P-littoralis_Contig1096.21.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length56
Homology
BLAST of mRNA_P-littoralis_Contig1096.21.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.380e-17
Identity = 42/51 (82.35%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    5 LVRPVFPSSTRDVAGRPCVPLELKKQVLGVLQVLGRGNCFADVANFSLMSQ 55
            LVR VFP++TRDVAGR CVPLELK  VLGVLQVLGRGNCFADVA  SLMS+
Sbjct:   89 LVRTVFPTATRDVAGRQCVPLELK--VLGVLQVLGRGNCFADVAQLSLMSR 137          
BLAST of mRNA_P-littoralis_Contig1096.21.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 9.740e-17
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    5 LVRPVFPSSTRDVAGRPCVPLELKKQVLGVLQVLGRGNCFADVANFSLMSQS 56
            +VRPVFP+   DV GR CVPLELK  VLGVLQVLGRGNCFADVANFSLMS++
Sbjct:  187 MVRPVFPAREHDVCGRLCVPLELK--VLGVLQVLGRGNCFADVANFSLMSRT 236          
BLAST of mRNA_P-littoralis_Contig1096.21.1 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.180e-6
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 0
Query:   30 QVLGVLQVLGRGNCFADVANFSLMSQS 56
            QVLGVLQ LGRGNCFADVANFSLMS++
Sbjct:    5 QVLGVLQALGRGNCFADVANFSLMSRT 31          
BLAST of mRNA_P-littoralis_Contig1096.21.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 4.640e-5
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    7 RPVFPSSTRDVAGRPCVPLELKKQVLGVLQVLGRGNCFADVANFSLMS 54
            R  FP+  +D +GR  +P++LK  VL  LQ+L RGNCFAD+ + S +S
Sbjct:  137 RDWFPTGKQDASGRRGIPVQLK--VLACLQILARGNCFADIYHMSFIS 182          
BLAST of mRNA_P-littoralis_Contig1096.21.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 6.350e-5
Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    7 RPVFPSSTRDVAGRPCVPLELKKQVLGVLQVLGRGNCFADVANFSLMS 54
            R  FP+   DV GR  VP+ELK  VL  LQ+L RGN FAD+ + S +S
Sbjct:  153 RDWFPTGESDVTGRQAVPVELK--VLACLQILSRGNVFADIYHMSFIS 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1096.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JV45_9PHAE8.380e-1782.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0H2_9PHAE9.740e-1778.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY35_9PHAE2.180e-688.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE4.640e-547.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE6.350e-552.08Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1096contigP-littoralis_Contig1096:69105..70315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1096.21.1mRNA_P-littoralis_Contig1096.21.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1096 69105..70315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1096.21.1 ID=prot_P-littoralis_Contig1096.21.1|Name=mRNA_P-littoralis_Contig1096.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=56bp
FVCGLVRPVFPSSTRDVAGRPCVPLELKKQVLGVLQVLGRGNCFADVANF
SLMSQS
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