mRNA_P-littoralis_Contig1.310.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA) HSP 1 Score: 211 bits (538), Expect = 5.990e-61 Identity = 119/281 (42.35%), Postives = 166/281 (59.07%), Query Frame = 1
Query: 1 VPKRKNFNDSEKEAVIRHLLA-GSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCVEITKETYKTKLIDGVIPAIKEKWP 840
V + NF ++ V HLL + +G L G+ + QF C W+T+ RLW++ ++A+ +KG +GRK + +L ER+ IP DRTT + +A + VP STL K L HS+++KP LT+ K RL+W + ++H+ D++ VDEKWFY+ + +L EEPP R +SKRFITKVMFL+AVARPR N TN F G+IG W FT+ VPA R+SRNR + T+VT +T++TY+ LID VIPAIK KWP
Sbjct: 5 VATKPNFTPQQRTDVCHHLLTLVARDGKLPYGSFRNVAAQFACNWQTVARLWKRAAYNPGSNTLCQDVASRKKGRAGRK-LKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP 280
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: A0A6H5L9I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9I0_9PHAE) HSP 1 Score: 197 bits (500), Expect = 3.150e-58 Identity = 102/136 (75.00%), Postives = 112/136 (82.35%), Query Frame = 1
Query: 1 VPKRKNFNDSEKEAVIRHLLAGSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTD 408
V KRKNFN+SEKE VIRHLL GS NG L GA KAA E+FGC W+T KRLWR+YD QH GV+SP LAN R GNSGRKG+ +ELRERLRDIPLNDRTTQRRLAAALE+P +TL KNLKAL LR HSNA+KP LTD
Sbjct: 10 VAKRKNFNNSEKEEVIRHLLTGSKNGVLPYGAFKAAAEKFGCHWETNKRLWRRYDTQHKAGVSSPQLANRRNGNSGRKGVPIEELRERLRDIPLNDRTTQRRLAAALEIPLTTLHKNLKALGLRAHSNAIKPYLTD 145
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: A0A6G0WUP2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUP2_9STRA) HSP 1 Score: 196 bits (497), Expect = 8.190e-56 Identity = 110/278 (39.57%), Postives = 168/278 (60.43%), Query Frame = 1
Query: 13 KNFNDSEKEAVIRHLLAGSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGI-DKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKAL-RLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCVEITKETYKTKLIDGVIPAIKEKWP 840
KN +D E+ A LL S G L RGA + A ++FGC TI R+W++ G+A+ + ++ KGNSGRK + E ++ + +R T R LA +P +T+ +++K RL+ SN +KP LT++ K+ERL++ MS+ R +++GS N ++ VDEKW YL ++F++YD E+ VR V+SK FITKVMFLAAVA+PR++ F GK+G+W F E VPA R +NR T+ T + Y+ +++ VIPAI++K+P
Sbjct: 23 KNLSDGERRADYEQLLEMSVEGELPRGAFQCAAQRFGCSRLTIARVWKRGRASIKEGLAAADTSSKIKGNSGRKCTRSSAAIEEAIKAVSHLNRQTLRTLAVKASIPKTTILRHMKQNPRLKARSNYVKPMLTEDNKLERLKFAMSFPRPSSSGSHFFDNMYSYVHVDEKWLYLTKVRRKFYVYDDEDVAVRSVKSKGFITKVMFLAAVAKPRYDYHERRMFDGKLGVWPFVESVPAKRTIKNRPKGTIETVHQSVNASVYQKTIMEKVIPAIRQKFP 300
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.590e-55 Identity = 114/279 (40.86%), Postives = 166/279 (59.50%), Query Frame = 1
Query: 13 KNFNDSEKEAVIRHLLAGSNNGT-LRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANAR-KGNSGRKGIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCVEITKETYKTKLIDGVIPAIKEKWPA 843
KN ++S++ AV++HLL N + L GA A FG T++ +W++ + + ++R KG+ GR + + + RL+ +P RTT R +AAAL +P STL K +S++++P+LTD K+ R++W + +V + V + D++ VDEKWF+ + ++L EEPP R +SK+FITKVMFL+AVARPR + A F GK+G W FT KVPA R SRNR A TLVT V +T+ YK L+D VIPAIK KWP+
Sbjct: 26 KNLSNSDRTAVLQHLLTLVNGKSILPHGAFAAVAANFGVARSTVRLIWKRAAVNLNDKLRPCSDVSSRIKGHCGRN-LKHESVASRLQALPKAKRTTFRSIAAALNMPRSTLHAYYKRGIFVKYSSSVRPALTDSNKIVRVKWALDFVHALNENEYVFSDMMDYVHVDEKWFFATTVKRTYYLAPGEEPPHRTCKSKKFITKVMFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS 303
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.850e-55 Identity = 117/278 (42.09%), Postives = 160/278 (57.55%), Query Frame = 1
Query: 16 NFNDSEKEAVIRHLLA-GSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCVEITKETYKTKLIDGVIPAIKEKWPAA 846
N E+ V LL S +G L G+ K ++F C W TI R+W++ + ++ + K SGRK +L +R+ IP DRTT +R+A+ + +P ++L + K L HS+ LKP LTD K RL+W +V V + ++ +DEKWFY+ + +L EEPP R QSKRFITKVMFL+AVARPR N + F GKIG W FTE VPA RNSRNR + TLVT V ++++TY+ L++ VIPAIK KWP A
Sbjct: 7 NLTKQERIDVSHQLLVLVSRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRK-KKYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFV----GPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDA 279
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: UPI0010357E51 (uncharacterized protein LOC114265064 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010357E51) HSP 1 Score: 195 bits (495), Expect = 2.900e-55 Identity = 113/281 (40.21%), Postives = 172/281 (61.21%), Query Frame = 1
Query: 10 RKNFNDSEKEAVIRHLLAGSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTDEGKVERLRWVMSWVR-SAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKC-VEITKETYKTKLIDGVIPAIKEKWPAA 846
+KN + ++++ LL S +G L+RG +F KT++R+W++ G+ +++ NSGRK + Q ++ +IPL RT R L+ AL +P ST+ + +K ++RPHSNALKP L+ E K RLR+ +S ++ ++ G + + D++ +DEKWFY+ + +R++L +EE P R +SKRFITKVMFL AVARPR + N F GKI +W FT K PA +NS+NRAA TL TK V +TK+ + LI+ V+ AI+ KWP +
Sbjct: 25 KKNLTNHLRQSIFETLLIRSKDGKLKRGCQTEVAVKFSVHIKTVRRIWQRGIACMENGLMVN--VSSKLTNSGRKQV--QLNFGKVTEIPLRRRTNIRSLSKALNLPKSTVHRRIKEGKIRPHSNALKPYLSKENKRARLRFCLSMLKPNSLQGQPMFESMYDYVHIDEKWFYISKEAERYYLLPEEEEPHRCCKSKRFITKVMFLVAVARPRFDENKNEEFLGKIEIWPFTYKEPAKKNSKNRAAGTLETKAIVSVTKDVIRACLIEKVLSAIQSKWPCS 301
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: A0A6P6TEQ3_COFAR (uncharacterized protein LOC113700698 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TEQ3_COFAR) HSP 1 Score: 198 bits (503), Expect = 6.170e-55 Identity = 117/282 (41.49%), Postives = 162/282 (57.45%), Query Frame = 1
Query: 7 KRKNFNDSEKEAVIRHLLAGSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRV-LHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCV-EITKETYKTKLIDGVIPAIKEKWPAA 846
K+KNF + K A+ LL NG L +G E F +++ R+W + T PNL+ GRK I Q E ++DIP RT R LA AL+V S+L + +K LRPHSN +KP L+ + K RL++ +S + S+ N D I +DEKWFY+ QR++L+ E P R +SKRF+ K+MFLAAVARPR++ N F GKIG+W F K PA RNS+NR A TL TK + ITK+ ++ LI+ ++PAI+EKWP +
Sbjct: 92 KKKNFTTALKRAIYEMLLKECENGKLSKGVISRVAECFDISTRSVSRIWHEGKCTATAYGHLPNLSPKLVKRVGRKKI--QVNLEDIKDIPFRRRTNIRSLAKALDVSKSSLHRRIKEESLRPHSNPVKPYLSTDSKKARLQFCLSMISEGTLASKFSFDNMHDRIHIDEKWFYMSKTSQRYYLHPLEHEPYRTCKSKRFVPKLMFLAAVARPRYDITLNKQFNGKIGIWPFVFKEPAKRNSKNRTAGTLETKPILSITKDVIRSCLIEKLLPAIREKWPCS 371
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: A0A6A4ZIA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZIA5_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.450e-54 Identity = 109/279 (39.07%), Postives = 170/279 (60.93%), Query Frame = 1
Query: 10 RKNFNDSEKEAVIRHLLAGSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGI-DKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLK-ALRLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCVEITKETYKTKLIDGVIPAIKEKWP 840
+++ +E+ AV LL S+NG+L RG QF C T+ R+W + + GG ++A+ +GNSGRK + +E+ +R +P + R T R +A ++P +T+ +++K A RL+ S+ +KP LT ERLR+ MS++ ++ G+ + D++ +DEKWFYL ++F++Y+ E R V+SKRFITKVMFLAA+ARPR T F GKIG+W F EK+PA RNS+NRA T++T + + Y +++ V+PAIK K+P
Sbjct: 23 KRHLRPAERHAVYETLLGASSNGSLPRGIIVRVAAQFHCHALTVSRIWSQGQESIRGGRICADVASKIRGNSGRKKLRTNEEIEAAIRQVPQSARQTLRGMAFQADIPKTTIVRHMKEAARLKARSSYVKPFLTPANIQERLRFAMSFLPPSSDGNHFFSDLHDYVHIDEKWFYLTRVKKKFYVYEDEVVAARFVKSKRFITKVMFLAAIARPRVE-LDGTIFDGKIGVWPFVEKMPARRNSKNRAKGTMITTPQSVDAKVYLNMVLNNVVPAIKSKFP 300
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 193 bits (490), Expect = 1.100e-53 Identity = 113/276 (40.94%), Postives = 162/276 (58.70%), Query Frame = 1
Query: 16 NFNDSEKEAVIRHLLAGSNNGTLRRGASKAAGEQFGCCWKTIKRLWRKYDQQHTGGVASPNLANARKGNSGRKGIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCVE-ITKETYKTKLIDGVIPAIKEKWP 840
N ++++ ++ LL S+NG + G AA ++ TI RLW + + T NLA+ GN GRK ID ELR ++R IPL+ R T + LAAAL V + + + LK R HS+ +KP+LT+E ++ R+++ +S G V + D + +DEKWF D + ++L EE PVR+ QSKRFI+K MF+AAVARPR++ F GKIG+WAF E+ A R S+NR T+V + VE + +E YK I +IPAIK KWP
Sbjct: 5 NLTPTQRQTIVCFLLDRSDNGEISGGDISAAVAKYERHRSTISRLWELHKKTQTEENRLGNLASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQRQSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWP 280
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Match: W4HB86_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HB86_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.390e-53 Identity = 114/286 (39.86%), Postives = 171/286 (59.79%), Query Frame = 1
Query: 4 PKRKNFNDSEKEAVIRHLLAGSNNGTLRR---GASKAAGEQFGCCWKTIKRLWRKYDQQHTGGV-ASPNLANARKGNSGRK-GIDKQELRERLRDIPLNDRTTQRRLAAALEVPHSTLSKNLKALRLRPHSNALKPSLTDEGKVERLRWVMSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVQSKRFITKVMFLAAVARPRHNPATNTTFKGKIGLWAFTEKVPAVRNSRNRAARTLVTKCVEITKETYKTKLIDGVIPAIKEKWPAA 846
P+R+N D E+EA++R +L SN + R G S+ +++ C TI+R+ QQ GG +A+ KG GRK ++++ +L +PL RTT R ++ + +L + LK R HSNA+KP LTD K R++ + +V S L++ F+ +DEKWFY+ ++++L E+ P R+ +SK++ITKVMFL AVARPR+N AT++ + GKIG+W F E V A R+S NR A TL TK + +TK+ Y+T L+D V+PAI KWP A
Sbjct: 3 PERRNLTDDEREAILREVLLRSNGSYITRLPKGFSQELADKYKCHVSTIRRVLAVAKQQGIGGGNMKVTVASKMKGRVGRKKAFTAEQVKAKLLQVPLAQRTTLRSISERTGISLGSLHRYLKLGLFRSHSNAIKPLLTDANKYGRMKHAVEFVGSTLE----LNDMLQFVHLDEKWFYITKVSRKYYLVPGEKEPKRECKSKQYITKVMFLCAVARPRYNHATDSWWDGKIGIWPFVEPVAAQRDSVNRKAGTLETKSITVTKDVYRTFLLDKVLPAIVAKWPRA 284 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1.310.1 >prot_P-littoralis_Contig1.310.1 ID=prot_P-littoralis_Contig1.310.1|Name=mRNA_P-littoralis_Contig1.310.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=168bp MSWVRSAAAGSRVLHNFDDFIRVDEKWFYLFVDGQRFHLYDKEEPPVRKVback to top mRNA from alignment at P-littoralis_Contig1:1433531..1434678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1.310.1 ID=mRNA_P-littoralis_Contig1.310.1|Name=mRNA_P-littoralis_Contig1.310.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1148bp|location=Sequence derived from alignment at P-littoralis_Contig1:1433531..1434678- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1:1433531..1434678- >mRNA_P-littoralis_Contig1.310.1 ID=mRNA_P-littoralis_Contig1.310.1|Name=mRNA_P-littoralis_Contig1.310.1|organism=Pylaiella littoralis U1_48|type=CDS|length=504bp|location=Sequence derived from alignment at P-littoralis_Contig1:1433531..1434678- (Pylaiella littoralis U1_48)back to top |