prot_P-littoralis_Contig1.226.2 (polypeptide) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: A0A6H5K2C5_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2C5_9PHAE) HSP 1 Score: 350 bits (898), Expect = 8.520e-118 Identity = 192/276 (69.57%), Postives = 218/276 (78.99%), Query Frame = 0
Query: 1 MMMARARHAAVCLVLAVLTTTNVVPRVGAFTGGLRAAVTQQLRPHDCSMAAASSTVVSRRSPRNSNAXXAGVPSS---TRRRLASPSALPMAP-MDFPGAGAGAGSPERDPRELDPALEGNAGDTYVKCGKCQACYAVKVEVLGRGRIIECSVCGNKWFQTAERALTLTENFLMKDWTENRAKDAAEAAKRVASFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVKVGASNASG 272
M M R RHA +CLVLA LTT V+P VGAF+GGLR A+TQQ PHDCSM A+SSTV SPR N A V S SP+AL MAP MDF GA E+DPRE+DP+L+G+AGDTYVKCGKCQACY ++++VLGRGRIIECSVCGN+WFQTAERALTLTENFLMKDWTE+R AEAAK A F LFVGNIP SVSEKDLGAIFGNFG+VKS LVTD NGDS+GYG+V+M + EDG+KAIKALNGIEIQG+SMLVKVGASN++G
Sbjct: 30 MTMGRTRHAGLCLVLAALTTMAVIPGVGAFSGGLRVAITQQ--PHDCSMVASSSTV----SPRPLNPAAAAVTPSGXXXXXXXXSPTALSMAPPMDFGGAEPA----EKDPREMDPSLQGSAGDTYVKCGKCQACYPMELDVLGRGRIIECSVCGNRWFQTAERALTLTENFLMKDWTEDRVAATAEAAKNFAGFNLFVGNIPFSVSEKDLGAIFGNFGEVKSTALVTDENGDSRGYGSVKMGTEEDGRKAIKALNGIEIQGRSMLVKVGASNSAG 295
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: I2CR05_NANGC (RRM domain-containing protein (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CR05_NANGC) HSP 1 Score: 112 bits (281), Expect = 1.260e-25 Identity = 69/196 (35.20%), Postives = 105/196 (53.57%), Query Frame = 0
Query: 90 PMDFPGAGAGAG--SPERDPRELDPALEGNAGDTYVKCGKCQACYAVKVEVLG-RGRIIECSVCGNKWFQTAERALTLTENFLMKDWTENRAKDAAE------------AAKRVASFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVKVGASNA 270
P P A G G +P+ DP +V+CG+C A YAV +++ G ++C VCG+ WFQ + R L+ +++KD+ E+ + AE AAK S +FVGN+P S++E D+ +F G V S T+V D SKG+G V M E+G++AI AL+G E+ G+ + V++G S A
Sbjct: 83 PRPSPAAAVGVGDAAPKSDPNV----------QYFVRCGRCNAAYAVGADLVRPEGGRVKCEVCGHTWFQASNRLQVLSPGYVLKDYPEDLKEKVAENVRNNRHPLDTSAAKGAIS--VFVGNLPFSMAEADVQEMFSEHGGVVSVTIVKDQLNRSKGFGFVEMADKEEGERAIAALDGREMDGRPINVRLGTSKA 266
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: A0A7S3TR26_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TR26_EMIHU) HSP 1 Score: 103 bits (256), Expect = 7.590e-23 Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 0
Query: 107 PRELDPALEGNAGDTYVKCGKCQACYAVKVEVLGRGRIIEC--SVCGNKWFQTAERALTLTENFLMKDWTENRAKD---AAEAAKRVASFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVKVGASNASG 272
PR ++ A +V C +C+A + V GR + C + C ++WFQTA+R TL + ++ + KD A ++A+ V F +FVGN+ SV+E DL +F G V ++TD +G +G+G V M G +A+K L+G E+QG+S+ V G N G
Sbjct: 21 PRHESALMQTKAPSKFVTCARCKATFEVDEADFATGRQVRCGGTGCDHEWFQTADRLQTLPNGMELVEYPQEM-KDRIAAGKSAEPVGRFNIFVGNLAYSVAEDDLREVFEGIGSVAKVIIMTDDDGRPRGFGFVNMEEEAAGARAVKELDGYELQGRSITVSEGKQNDRG 190
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: A0A7R9WVI4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WVI4_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.270e-22 Identity = 53/152 (34.87%), Postives = 87/152 (57.24%), Query Frame = 0
Query: 121 TYVKCGKCQACYAVKVEVLG--RGRIIECSVCGNKWFQTAERALTLTENFLMKDWTENRAKDAAE------AAKRVASFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVK 264
TY +CG+C +A+ + LG RGR +ECSVCG+ W+Q+ +R + F + D E + A + K V +L+VGNI + +E+D+ F GDV +LV D G ++G+G + M + E G+KAI+ L+G + G+++ V+
Sbjct: 70 TYARCGRCDTSFALAPDDLGNGRGRRLECSVCGHTWYQSKDRLSNMNGGFEIIDLPETDLQRIANNIEEGRSPKFVGEMKLYVGNIAFTCTEQDMQEAFSEAGDVGEVSLVRDDEGRNRGFGFITMRTKEGGEKAIELLDGASVNGRNIAVR 221
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: A0A7S1Z4Z8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4Z8_TRICV) HSP 1 Score: 100 bits (248), Expect = 2.210e-21 Identity = 56/154 (36.36%), Postives = 92/154 (59.74%), Query Frame = 0
Query: 121 TYVKCGKCQACYAVKVEVLG---RGRIIECSVCGNKWFQTAERALTLTENFLMKDWTEN---RAKDAAEAAKRVASF----ELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVK 264
TYV+CG+C A YA++ + LG +GR +ECSVCG+ W+Q+ +R L+ F + + ++ R K EA R A F + +VGN+ E+ + F G V +L+TD +G S+G+ V M + EDG+KA++ L+G E+ G+++ V+
Sbjct: 79 TYVQCGRCHAAYAIQEDDLGDRGKGRRVECSVCGHSWYQSRDRLFGLSTGFEYRPFPQSDVVRVKSNLEAG-RPADFRGVAKFYVGNLDYGTDEESVRVHFETAGTVGDVSLITDEDGRSRGFAFVTMMTEEDGEKAVQ-LDGTELAGRNISVR 230
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: A0A6V2PYU0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PYU0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.220e-21 Identity = 53/154 (34.42%), Postives = 89/154 (57.79%), Query Frame = 0
Query: 120 DTYVKCGKCQACYAVKVEVLG---RGRIIECSVCGNKWFQTAERALTLTENFLMKDWTENRAKDAAE--AAKRVASF----ELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVK 264
+TY +CG+C +A+ E LG +GR +ECSVCG+ W+Q ++ + E F + + ++ AA R F +L+VGN+ V+E+DL F +V T++TD +G SKG+ V M + E G+KA++ L+G E+ G+++ V+
Sbjct: 64 ETYARCGRCSTSFALTSEDLGDRGKGRRVECSVCGHSWYQARDKLFDIREGFELVELPQSDVSRIERNIAADRDPRFTGDSKLYVGNLDFKVTEEDLFEEFSKVDEVGDVTIITDDSGRSKGFAFVTMLTKEGGEKALEKLDGEEVFGRNLNVR 217
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: A0A2V3J103_9FLOR (Putative RNA-binding protein RbpE n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J103_9FLOR) HSP 1 Score: 97.1 bits (240), Expect = 7.130e-20 Identity = 59/187 (31.55%), Postives = 96/187 (51.34%), Query Frame = 0
Query: 105 RDPRELD--PALEGNAGDTY-VKCGKCQACYAVKVEVLGRGRIIECSVCGNKWFQTAERALTL--TENF----------LMKDWTENRAKDAAEAAKR------VASFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVKVGASNA 270
RDPR + P + Y KC KC A Y + VLG GR + CSVC N+WFQ +R + TE F L++ +NRA+ R +F +F+GN+P SV+E++L + + K ++VTD +G+SKG+ + S E+ + +++L+ I G+++ V+ G N+
Sbjct: 91 RDPRRFESPPRFTPDPNAVYYTKCAKCSAAYELDPLVLGNGRRVACSVCSNEWFQKPDRLFKMRETEQFSEYPMDRKAELLERNQQNRARGGRRRDTRDRRPTYTKTFSVFIGNLPYSVTEQELTELISSVVKPKRISIVTDQDGNSKGFAFADVQSEEEVDQIVRSLDATRIAGRTIAVRPGKKNS 277
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: L1IF02_GUITC (RRM domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IF02_GUITC) HSP 1 Score: 92.4 bits (228), Expect = 1.170e-18 Identity = 53/156 (33.97%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 122 YVKCGKCQACYAVKVEVLGR-GRIIECSVCGNKWFQTAER-----ALTLTENFLMKDWTENRAKDAAEAAK-----RVASFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDA-NGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVKV 265
Y CGKC A Y + LG G+ ++CSVC NKWFQ+A R A + F + +W + ++ K R +F LFVGN+P +SE +L A+F G+V S +L+ D +G +G+G V + + + A+ LNG+ + G+ + V +
Sbjct: 55 YTTCGKCGAVYVINPADLGSDGQKVQCSVCNNKWFQSAARLAEAPAGSTFRAFPVSNWQKQDQANSQGGEKKFRHDRKGAFTLFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKDAVSNLNGMPLDGREISVSI 210
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: R7QQ59_CHOCR (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ59_CHOCR) HSP 1 Score: 85.1 bits (209), Expect = 1.960e-15 Identity = 49/187 (26.20%), Postives = 85/187 (45.45%), Query Frame = 0
Query: 122 YVKCGKCQACYAVKVEVLG-RGRIIECSVCGNKWFQTAERALTLTENFLMKDWTENRAKDAAEAAKRV--------------------------------------ASFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDANGDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVKVGASN 269
+ KCG CQA Y + + G RG+ + CSVCGN+WFQ A+R +TL + K++ ++ + E +++ + LF+GN+P + ++DL + G + ++ D G SKG+ + S E Q A+ L+G E+ G+++ V+ G N
Sbjct: 106 FTKCGSCQAAYKLDPDFPGPRGKKVACSVCGNQWFQRADRLMTLRQGDQFKEYPVDQKDELMEKQQQLRMERFRARSNDGGDRRGGYRRDGPREGQGARRSNSRNFSPHSLFIGNLPFNTEQEDLERVVGQVVEFTRVAIIRDPTGRSKGFAFADVKSEEAVQMAVSKLDGKELGGRAITVREGRKN 292
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Match: A0A519E0E8_9BURK (RNA-binding protein n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519E0E8_9BURK) HSP 1 Score: 77.0 bits (188), Expect = 6.090e-14 Identity = 41/93 (44.09%), Postives = 60/93 (64.52%), Query Frame = 0
Query: 190 SFELFVGNIPLSVSEKDLGAIFGNFGDVKSATLVTDAN-GDSKGYGNVRMTSAEDGQKAIKALNGIEIQGKSMLVKVGASNASGXXXXXXXGR 281
S +++VGN+P SV++ L + FG G VKSA ++TD + G+SKG+G V M SAED Q AI ALNG+++ G+S++V + G GR
Sbjct: 2 STKIYVGNLPYSVTDASLRSNFGEHGSVKSAKVMTDRDTGNSKGFGFVEMASAEDAQAAITALNGMQVDGRSIVVSLARPREGGNDGGSRGGR 94 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.226.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig1.226.2 ID=prot_P-littoralis_Contig1.226.2|Name=mRNA_P-littoralis_Contig1.226.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=304bpback to top |