prot_P-littoralis_Contig21.119.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig21.119.1
Unique Nameprot_P-littoralis_Contig21.119.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length220
Homology
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: FCPE_MACPY (Fucoxanthin-chlorophyll a-c binding protein E, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=FCPE_MACPY)

HSP 1 Score: 357 bits (917), Expect = 1.220e-123
Identity = 183/213 (85.92%), Postives = 194/213 (91.08%), Query Frame = 0
Query:    7 MAVACAAGAQAFVAPSAFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            MA+ACAA A        FNGAAL ++  S+SAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAV GH+TQQN RLPGMLSF++N+AF D PNG+AAFSKIPPLGTLQIILAIG HELFVVKQVE SFPGDCTTGGNIFQSAWDN SEET+ASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAY+FN
Sbjct:    1 MAIACAA-APGLRGAEPFNGAALATSAKSSSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVVGHITQQNTRLPGMLSFKENLAFADSPNGVAAFSKIPPLGTLQIILAIGCHELFVVKQVEGSFPGDCTTGGNIFQSAWDNMSEETQASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYQFN 212          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: A0A6H5KCX6_9PHAE (LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5KCX6_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 6.290e-109
Identity = 164/219 (74.89%), Postives = 187/219 (85.39%), Query Frame = 0
Query:    1 MKTACCMAVACAAGAQAFVAPSAFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            MK+AC MA+ACAA A AFVAPSAFNGAA+ +   S+SAMKMSFESEIGAQPP+GFWDPLGL+ADADQERF+RLRYVE+KHGRIAMLA+AGHLTQQNVRLPGMLS   N++F D+PNG+AA SKIPP G  QI   +G  EL V+K VE SFPGD T GGN F S+WD  SEET+ SKRAIELNNGRAAQMGILA+MVHE+L+N+PYIINDL GA+Y FN
Sbjct:    1 MKSAC-MALACAASANAFVAPSAFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYIINDLLGASYTFN 218          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: FCPB_MACPY (Fucoxanthin-chlorophyll a-c binding protein B, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPB_MACPY)

HSP 1 Score: 304 bits (778), Expect = 2.130e-102
Identity = 157/213 (73.71%), Postives = 179/213 (84.04%), Query Frame = 0
Query:    7 MAVACAAGAQAFVAPSAFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            MAVACAA A  F  PSAFNGAALT++  + SAMKMSFESEIGAQ P+GFWDPLGL+ADADQERF+RLRYVE+KHGRIAMLA+AGHLTQQN RLPGMLS   N++F D+PNG+AA SKIPP G  QI   IG  EL V+K VE SFPGD T GGN F ++WD  SEET+ASKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL GA+Y FN
Sbjct:    6 MAVACAA-APGFRGPSAFNGAALTTSAKACSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGASWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLVGASYTFN 217          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: A0A6H5JHT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT6_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.640e-100
Identity = 147/198 (74.24%), Postives = 170/198 (85.86%), Query Frame = 0
Query:   22 SAFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            SAFNGAA+ ++  S+SAMKMSFESEIGAQPP+GFWDPLGL+ADADQERF+RLRYVE+KHGRIAMLA+AGHLTQQNVRLPGMLS   +++F D+PNG+AA SKIPP G  QI   +G  EL V+K VE SFPGD T GGN F S+WD  SEET+ASKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL GA Y FN
Sbjct:   24 SAFNGAAVATSAKSSSAMKMSFESEIGAQPPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNVRLPGMLSNSADLSFADMPNGVAALSKIPPAGLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 221          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: FCPF_MACPY (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic (Fragment) n=1 Tax=Macrocystis pyrifera TaxID=35122 RepID=FCPF_MACPY)

HSP 1 Score: 296 bits (758), Expect = 1.920e-99
Identity = 155/212 (73.11%), Postives = 174/212 (82.08%), Query Frame = 0
Query:    8 AVACAAGAQAFVAPSAFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            A+ACAA A     PSAFNGAAL++   S+SAMKMSFESEIGAQ P+GFWDPLGL+ADADQERF+RLRYVE+KHGRIAMLA+AGHLTQQN RLPGMLS   N++F D+PNG+AA SKIPP G  QI   IG  EL V+K VE SFPGD   GGN F S+WD+ S ET+ASKRAIELNNGRAAQMGIL MMVHE+LSNQPYI NDL GA+Y FN
Sbjct:    1 AIACAA-APGLRGPSAFNGAALSTPAKSSSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFIIGGNPFASSWDSMSSETQASKRAIELNNGRAAQMGILGMMVHEELSNQPYITNDLLGASYTFN 211          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: D8LNK6_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK6_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 9.280e-97
Identity = 146/197 (74.11%), Postives = 166/197 (84.26%), Query Frame = 0
Query:   23 AFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            AFNGAA+ +   S+SAMKMSFESEIGAQPP+GFWDPLGL+ DADQERF+RLRYVE+KHGRIAMLA+AGHLTQQN RLPGMLS   N++F D+PNG+AA SKIPP G  QI   IG  EL V+K VE SFPGD T GGN F S+WD  SEET+ASKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL GA Y FN
Sbjct:  181 AFNGAAVATPAKSSSAMKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYTFN 377          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: FCPC_MACPY (Fucoxanthin-chlorophyll a-c binding protein C, chloroplastic n=6 Tax=Phaeophyceae TaxID=2870 RepID=FCPC_MACPY)

HSP 1 Score: 289 bits (739), Expect = 1.770e-96
Identity = 145/199 (72.86%), Postives = 167/199 (83.92%), Query Frame = 0
Query:   21 PSAFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            PSAFNGAALT++  S+SAMKMSFESEIGAQ P+GFWDPLGL+ DADQ+ F+RLRYVE+K GRIAMLA+AGHLTQQN RLPGMLS   N++F D+PNG+AA SKIPP G  QI   IG  EL V+K VE SFPGD T GGN F S+WD  S ET+ASKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL GA+Y FN
Sbjct:   18 PSAFNGAALTTSAKSSSAMKMSFESEIGAQAPLGFWDPLGLLEDADQDAFERLRYVEVKLGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSAETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 216          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: A0A6H5JDS8_9PHAE (LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS8_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.020e-94
Identity = 137/181 (75.69%), Postives = 154/181 (85.08%), Query Frame = 0
Query:   39 MKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            MKMSFESEIGAQPP+GFWDPLGL+ DADQERF+RLRYVE+KHGRIAMLA+AGHLTQQN RLPGMLS   N++F D+PNG+AA SKIPP G  QI   IG  EL V+K VE SFPGD T GGN F S+WD  SEET+ASKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL GA Y FN
Sbjct:    1 MKMSFESEIGAQPPLGFWDPLGLLEDADQERFERLRYVEVKHGRIAMLAIAGHLTQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPAGLAQIFAFIGFLELAVMKNVEGSFPGDFTLGGNPFGSSWDAMSEETQASKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGAGYNFN 181          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: FCPD_MACPY (Fucoxanthin-chlorophyll a-c binding protein D, chloroplastic (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=FCPD_MACPY)

HSP 1 Score: 277 bits (709), Expect = 2.030e-92
Identity = 136/182 (74.73%), Postives = 154/182 (84.62%), Query Frame = 0
Query:   38 AMKMSFESEIGAQPPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            AMKMSFE EIGAQ P+GFWDPLGL+ADADQERF+RLRYVE+KHGRIAMLA+AGHLTQQN RLPGMLS   N++F D+PNG+AA SKIPP G  QI   IG  EL V+K VE SFPGD T GGN F S+WD  SEET+ SKRAIELNNGRAAQMGILA+MVHE+L+N+PY+INDL GA+Y FN
Sbjct:    1 AMKMSFELEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHLTQQNARLPGMLSNSANLSFADMPNGVAALSKIPPGGLAQIFGFIGFLELAVMKNVEGSFPGDFTLGGNPFASSWDAMSEETQESKRAIELNNGRAAQMGILALMVHEELNNKPYVINDLLGASYNFN 182          
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Match: D7FIR0_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIR0_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 4.090e-87
Identity = 142/223 (63.68%), Postives = 174/223 (78.03%), Query Frame = 0
Query:    1 MKTACCMAV---ACAAGAQAFVAPSAFNGAALTSAKASNSAMKMSFESEIGAQPPIGFWDPLGLVA-DADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLPGMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDSFPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQLSNQPYIINDLAGAAYKFN 219
            MKTAC MA    ACAA A AFVAPSAF GA+LT+AK ++S+MKMSFE+EIGAQ PIG+WDPLGL+  D  QERFDRLRYVEIKHGRIAMLA+ GH+T QN R PGML+   +++F D PNGLAA SKIP  G +QI L IG  E  V+ Q E SFPGD +   N F+  W++++EE +A+KRAIELNNGRAAQMGIL +MVHEQ++N PY+IN++ G+  +FN
Sbjct:    1 MKTACAMAAGVAACAATASAFVAPSAFKGASLTAAKPASSSMKMSFETEIGAQAPIGYWDPLGLLTKDPSQERFDRLRYVEIKHGRIAMLAILGHITAQNFRFPGMLAPSADLSFADCPNGLAAISKIPLYGLIQIFLFIGFLETKVMLQKEGSFPGDMSLI-NPFEKEWESWTEEEQATKRAIELNNGRAAQMGILGLMVHEQINNTPYVINEILGSHVQFN 222          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
FCPE_MACPY1.220e-12385.92Fucoxanthin-chlorophyll a-c binding protein E, chl... [more]
A0A6H5KCX6_9PHAE6.290e-10974.89LHCP protein n=20 Tax=Phaeophyceae TaxID=2870 RepI... [more]
FCPB_MACPY2.130e-10273.71Fucoxanthin-chlorophyll a-c binding protein B, chl... [more]
A0A6H5JHT6_9PHAE1.640e-10074.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
FCPF_MACPY1.920e-9973.11Fucoxanthin-chlorophyll a-c binding protein F, chl... [more]
D8LNK6_ECTSI9.280e-9774.11Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
FCPC_MACPY1.770e-9672.86Fucoxanthin-chlorophyll a-c binding protein C, chl... [more]
A0A6H5JDS8_9PHAE1.020e-9475.69LHCP protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
FCPD_MACPY2.030e-9274.73Fucoxanthin-chlorophyll a-c binding protein D, chl... [more]
D7FIR0_ECTSI4.090e-8763.68Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 47..199
e-value: 1.9E-32
score: 113.0
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 38..215
e-value: 1.4E-32
score: 115.0
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 3..206
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 36..209
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 3..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig21contigP-littoralis_Contig21:461314..464302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig21.119.1mRNA_P-littoralis_Contig21.119.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig21 461280..465687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig21.119.1 ID=prot_P-littoralis_Contig21.119.1|Name=mRNA_P-littoralis_Contig21.119.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=220bp
MKTACCMAVACAAGAQAFVAPSAFNGAALTSAKASNSAMKMSFESEIGAQ
PPIGFWDPLGLVADADQERFDRLRYVEIKHGRIAMLAVAGHLTQQNVRLP
GMLSFRDNIAFEDVPNGLAAFSKIPPLGTLQIILAIGVHELFVVKQVEDS
FPGDCTTGGNIFQSAWDNFSEETKASKRAIELNNGRAAQMGILAMMVHEQ
LSNQPYIINDLAGAAYKFN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln