mRNA_P-littoralis_Contig21.115.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: D7FNQ1_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ1_ECTSI) HSP 1 Score: 345 bits (884), Expect = 2.070e-112 Identity = 192/264 (72.73%), Postives = 208/264 (78.79%), Query Frame = 3
Query: 135 MEVPVFPYQETRRGEVVALRGWLARGGQINSPLLRSVAETWTPLTLACAEGDVALVRLLVETGGARASASVGTKVLASSAPLHVASRYGHAGVATVLLELGAVVDARDTIGMMPLHYAAGNGHLKTIEVLLGAGAGTSSSXXXXXXXXXXXXXXXESPGGATALDLAEMAGFHDAAALLRSRALA-RDG---VARRRALGSWLGALGCKEFLGRFLKAGYDDLPFMAAQGLTEADLDCVGVPRDKLGLRKKLLAMHDVDMFLDA 914
M+ PVFPYQETR G+ ALR WL++GG I++PLLRSVAETWTPL LACAEG V LVR +VE GGAR S S TKVLASS+PLHVASRYGHAGVA VLLELGAVVDARDT G PL YAAGNGHLKTIEVLL AGA SSS E+P A ALD+AEMAGF DAA LLRSRALA DG V RR+ L SWLG LGC+EFLGRFL+AGYDDL FMA+QGLTEADLDCVGVP DKLGLRKKLLAMH V+ FL+A
Sbjct: 1 MDAPVFPYQETRGGDFSALRHWLSQGGTIDAPLLRSVAETWTPLALACAEGRVELVRAIVEIGGARPSFSAQTKVLASSSPLHVASRYGHAGVAAVLLELGAVVDARDTFGFTPLCYAAGNGHLKTIEVLLEAGADASSSF--------------EAPYAAKALDMAEMAGFDDAATLLRSRALAGEDGGEAVRRRKTLASWLGVLGCREFLGRFLRAGYDDLQFMASQGLTEADLDCVGVPGDKLGLRKKLLAMHGVEGFLNA 250
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: A0A835YT05_9STRA (A designed full consensus ankyrin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT05_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.830e-41 Identity = 106/256 (41.41%), Postives = 137/256 (53.52%), Query Frame = 3
Query: 147 VFPYQETRRGEVVALRGWLARGGQINSPLLRSVAETWTPLTLACAEGDVALVRLLVETGGARASASVGTKVLASSAPLHVASRYGHAG--VATVLLELGAVVDARDTIGMMPLHYAAGNGHLKTIEVLLGAGAGTSSSXXXXXXXXXXXXXXXESPGGATALDLAEMAGFHDAAALLRSRALARDGVARRRALGSWLGALGCKEFLGRFLKAGYDDLPFMAAQGLTEADLDCVGVPRDKLGLRKKLLAMHDVDMFL 908
+FPY R G+++A W R + R E WTPL LA AEG+ A V L++ G AR + +KVL PLHVA+RYG + VA +L GA A D+ GM PLHYAA +GH + LL AGA + + G T LD A + H A A L A AR+G R L +WL +LGC + F AGYDDL F+AA GL+ DLDC+GVP +LGLR+KL A+H++ L
Sbjct: 21 LFPYAAVRTGDLLAAASWAYRSNSSDWANARLAGEQWTPLHLAVAEGNHAAVAFLLQHG-ARPDSIATSKVLPGHTPLHVAARYGSSPDIVAALLAAPGADAGAADSHGMTPLHYAACSGHADCAQQLLSAGASALAP---------------SAHGALTPLDAARLC-RHAAVAALLEAAAAREGA--RAPLAAWLRSLGCGAYARAFAAAGYDDLAFIAAHGLSAEDLDCIGVPMAQLGLRRKLTALHNIAQHL 257
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: A0A7S2FWK0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FWK0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.250e-19 Identity = 99/256 (38.67%), Postives = 126/256 (49.22%), Query Frame = 3
Query: 135 MEVPVFPYQETRRGEVVALRGWLARGG-QINSPLLRSVAETWTPLTLACAEGDVALVRLLVETGGARAS--ASVGTKVLASSAPLHVASRYGHAGVATVLLELGAVVDARDTIGMMPLHYAAGNGHLKTIEVLLGAGAGTSSSXXXXXXXXXXXXXXXESPGGATALDLAEMAGFHDAAALLRSRALARDGVARRRALGSWLGALGCKEFLGRFLKAGYDDLPFMAAQGLTEADLDCVGVPRDKLGLRKKLLAMHD 893
M FP + R GE V + W+ GG I+ P E W PL L AEG+ A V ++ T GAR A + LH+A+RYGHA V + L+ GA V+ RD G PL XXXXXXXXXXXXXXX + AALLR+R + + + L SWL +LGC ++ RFL AGYD +++ GL E D+D V VPR KLGLRKKLLA+ +
Sbjct: 1 MATAPFPIEAARHGEYVPIATWVQTGGGAIDQPFK---FEDWNPLQLLAAEGNKAGVEAVL-TAGARVDFHAQPAAPGVPWQTALHIAARYGHAEVVSALVSAGADVNLRDGSGFAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH----------------RELAALLRTRKASPEASDHDK-LASWLESLGCAKYTTRFLDAGYD-FQYISEHGLAEDDIDLVQVPRTKLGLRKKLLALQN 234
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: A0A8K1FNW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNW7_PYTOL) HSP 1 Score: 81.6 bits (200), Expect = 1.260e-13 Identity = 64/220 (29.09%), Postives = 106/220 (48.18%), Query Frame = 3
Query: 255 WTPLTLACAEGDVALVRLLVETGGARASASVGTKVLASSAPLHVASRYGHAGVATVLLELGAVVD--ARDTIGMMPLHYAAGNGHLKTIEVLLGAGAGTSSSXXXXXXXXXXXXXXXESPGGATALDLAEMAGFHDAAALLRSRALARDGVARRRALGSWLGALGCKEFLGRFLKAGYDDLPFMAAQGLTEADLDCVGVPRDKLGLRKKLLAMHDVDMFL 908
WTPL ACA GD L ++ + + TK S + LHVA+R+G A + LL+ GA+ A +G PLH A G++ ++ LL A + G T +LA+ G + + +L+ + LG+WL ++G E+ +F +AG++D+ F+ A GLT++ LD + + +K G R KL +++ + FL
Sbjct: 28 WTPLQFACALGDEELAEQILAQDEHQLHSVSKTKY--SYSALHVATRFGQASIVDSLLKKGAMTTTPADGVVGASPLHIAVVQGNMPLVQRLLSA----------------YPHGMPMTKNGTTPYELAKRLGHVEISQVLQDH---EQRAQNKEQLGNWLASIGMVEYAPQFEEAGFEDVHFLLANGLTDSVLDRMKI--EKPGHRMKLQSLYQLKEFL 224
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: A0A482UJW8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UJW8_9ARCH) HSP 1 Score: 67.4 bits (163), Expect = 2.540e-10 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 3
Query: 738 LGCKEFLGRFLKAGYDDLPFMAAQGLTEADLDCVGVPRDKLGLRKKLLAMHDVDMF 905
LG E+L RFL AGYD LPF+ GL++ DLDC+GVP +K+GLR+K+ +H +D F
Sbjct: 10 LGGSEYLQRFLDAGYD-LPFIHTHGLSDVDLDCIGVPVNKMGLRRKMSKLHGLDRF 64
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: UPI00148570DD (ankyrin repeat domain-containing protein n=1 Tax=Herbidospora galbida TaxID=2575442 RepID=UPI00148570DD) HSP 1 Score: 55.8 bits (133), Expect = 1.430e-5 Identity = 47/124 (37.90%), Postives = 62/124 (50.00%), Query Frame = 3
Query: 174 GEVVALRGWLARGGQINSPLLRSVAETWTPLT-LACAEGDVALVRLLVETGGARASASVGTKVLAS-SAPLHVASRYGHAGVATVLLELGAVVDARDTIGMMPLHYAAGNGHLKTIEVLLGAGA 539
G+ LRG L G N V + TPL LA G + ++R+LVE GG S+ V+A P + VLLELGA V+ARD+ G MPLH+A+ G+ + LL AGA
Sbjct: 13 GDTAGLRGMLLSGADPN------VVDDGTPLVELAVRFGRIGVLRVLVEFGGTLDVPSLLHNVVAGRELP----------DMLLVLLELGADVNARDSAGWMPLHFASAYGYEGSARALLDAGA 120
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: A0A8B7YPL6_ACAPL (transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YPL6_ACAPL) HSP 1 Score: 58.5 bits (140), Expect = 2.750e-5 Identity = 37/123 (30.08%), Postives = 64/123 (52.03%), Query Frame = 3
Query: 174 GEVVALRGWLARGGQIN-SPLLRSVAETWTPLTLACAEGDVALVRLLVETGGARASASVGTKVLASSAPLHVASRYGHAGVATVLLELGAVVDARDTIGMMPLHYAAGNGHLKTIEVLLGAGA 539
G+ A++ L G +I+ +++ E TPL LAC +G + +V+L++ TG ++ PLH A+ + HA + LL+ G+ +DA+D PL A G +++ +LL GA
Sbjct: 293 GDFAAVKLCLKYGARIDVQQVIKCKGERATPLHLACTQGSLDIVKLMLSTGQTDKDTALNVPDCQLQLPLHRAAMFDHAEIVDYLLQEGSYIDAQDKNQRTPLLLATQRGSWRSVLLLLERGA 415
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Match: A0A4U3MF20_9ACTN (Uncharacterized protein n=1 Tax=Herbidospora galbida TaxID=2575442 RepID=A0A4U3MF20_9ACTN) HSP 1 Score: 55.8 bits (133), Expect = 3.820e-5 Identity = 47/124 (37.90%), Postives = 62/124 (50.00%), Query Frame = 3
Query: 174 GEVVALRGWLARGGQINSPLLRSVAETWTPLT-LACAEGDVALVRLLVETGGARASASVGTKVLAS-SAPLHVASRYGHAGVATVLLELGAVVDARDTIGMMPLHYAAGNGHLKTIEVLLGAGA 539
G+ LRG L G N V + TPL LA G + ++R+LVE GG S+ V+A P + VLLELGA V+ARD+ G MPLH+A+ G+ + LL AGA
Sbjct: 78 GDTAGLRGMLLSGADPN------VVDDGTPLVELAVRFGRIGVLRVLVEFGGTLDVPSLLHNVVAGRELP----------DMLLVLLELGADVNARDSAGWMPLHFASAYGYEGSARALLDAGA 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig21.115.1 >prot_P-littoralis_Contig21.115.1 ID=prot_P-littoralis_Contig21.115.1|Name=mRNA_P-littoralis_Contig21.115.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=349bp MEVPVFPYQETRRGEVVALRGWLARGGQINSPLLRSVAETWTPLTLACAEback to top mRNA from alignment at P-littoralis_Contig21:444465..450267- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig21.115.1 ID=mRNA_P-littoralis_Contig21.115.1|Name=mRNA_P-littoralis_Contig21.115.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5803bp|location=Sequence derived from alignment at P-littoralis_Contig21:444465..450267- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig21:444465..450267- >mRNA_P-littoralis_Contig21.115.1 ID=mRNA_P-littoralis_Contig21.115.1|Name=mRNA_P-littoralis_Contig21.115.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1047bp|location=Sequence derived from alignment at P-littoralis_Contig21:444465..450267- (Pylaiella littoralis U1_48)back to top |