prot_P-littoralis_Contig209.64.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig209.64.1
Unique Name	prot_P-littoralis_Contig209.64.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	376

Homology

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BLAST of mRNA_P-littoralis_Contig209.64.1 vs. uniprot
Match: D8LSM0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM0_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 3.020e-36
Identity = 97/172 (56.40%), Postives = 114/172 (66.28%), Query Frame = 0

Query:   47 TMLDVKEAQLQAELRKRPYGDAVFEALQRTVDEEEAVVVSTGGADGAAVAAAAVGKGEGGSSEKPGGLQGTGGSXXXXXGAAGFLSTGDKVWKRGAAGSGDGSSGSDEKENRRLEGERVEAAARRTALWAVARGHREKLPDSVRVKWPDVLLSLRYQKNLLEAYREREKRES 218
            T LDV EA+LQAEL KRPYGDAVFEAL+RT+++EEAVVV  G A+G+       G      S+  GG               G + TGDKVW R           SDE+E+ RLE ERVEAAARRTALWAVARGHR++L   VRVKWPDVLLS+RYQKNLL  YRERE +++
Sbjct:  570 TRLDVVEAELQAELLKRPYGDAVFEALRRTLEQEEAVVVRGGAAEGSGSLGTMTG------SDNSGG---------------GDVVTGDKVWNRAPG-------VSDEEEDLRLEFERVEAAARRTALWAVARGHRKELAADVRVKWPDVLLSMRYQKNLLRMYREREAQDN 713

[Close]

BLAST of mRNA_P-littoralis_Contig209.64.1 vs. uniprot
Match: A0A6H5KLV6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV6_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 1.250e-34
Identity = 137/296 (46.28%), Postives = 157/296 (53.04%), Query Frame = 0

Query:   47 TMLDVKEAQ-----------LQAELRKRPYGDAVFEALQRTVDEEEAVVVSTGGADGAAVAAAAVGKGEGGSSEKPGGLQGTGGSXXXXXGAAGFLSTGDKVWKRGAAGSGDGSSGSDEKENRRLEGERVEAAARRTALWAVARGHREKLPDSVRVKWPDVLLSLRYQKNLLEAYREREKRESARASATGVAAAVGDMKSFTSFRKLKTDPVRNPKPAAGFSKPSKKRGDGTAAGGRKQGSHARGXXXXXXXXXXXXXXNKSRRSDAADYSAEFIMPRDHFHGPTFHALLHEYRAE 331
            T LDV EA+            +AEL KRPYGDAVFEAL+RT+++EEAVVV  G A+G+                   G  GT   XXXXX   G + TGD++W R           SDE+E+ RLE ERVEAAARRTALWAVARGHR++L D VRVKWPDVLLS+RYQKNLL  YRERE  ++  A                                                           XXXXXXXXXXXXXX        +  SAEFIMPRDHFHGPTFHALL+EYR E
Sbjct:  296 TRLDVVEAEHGEPRRRGSPVAKAELLKRPYGDAVFEALRRTLEQEEAVVVRGGAAEGS-------------------GSLGT--XXXXXXXXXGDVITGDRIWNRAPG-------VSDEEEDLRLEFERVEAAARRTALWAVARGHRKELADDVRVKWPDVLLSMRYQKNLLRMYREREAVDNHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSCSAEFIMPRDHFHGPTFHALLNEYREE 554

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig209.64.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig209.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LSM0_ECTSI	3.020e-36	56.40	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KLV6_9PHAE	1.250e-34	46.28	Helicase ATP-binding domain-containing protein n=1...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 329..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 297..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig209	contig	P-littoralis_Contig209:362194..364301 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig209.64.1	mRNA_P-littoralis_Contig209.64.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig209 362194..364301 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig209.64.1 ID=prot_P-littoralis_Contig209.64.1|Name=mRNA_P-littoralis_Contig209.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=376bp
NRQSRRKKAKFGGQADFANLIREEVRKSGGRSEAKLHRLMDNETLRTMLD
VKEAQLQAELRKRPYGDAVFEALQRTVDEEEAVVVSTGGADGAAVAAAAV
GKGEGGSSEKPGGLQGTGGSGESGSGAAGFLSTGDKVWKRGAAGSGDGSS
GSDEKENRRLEGERVEAAARRTALWAVARGHREKLPDSVRVKWPDVLLSL
RYQKNLLEAYREREKRESARASATGVAAAVGDMKSFTSFRKLKTDPVRNP
KPAAGFSKPSKKRGDGTAAGGRKQGSHARGGGGGGGRGGARSGGNKSRRS
DAADYSAEFIMPRDHFHGPTFHALLHEYRAEHLAAAREAQEEAEAAEDRK
REDGKDEGTEKSRAATENIASGATGS