prot_P-littoralis_Contig209.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig209.7.1
Unique Nameprot_P-littoralis_Contig209.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length819
Homology
BLAST of mRNA_P-littoralis_Contig209.7.1 vs. uniprot
Match: A0A6H5L6L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L3_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 5.690e-104
Identity = 326/858 (38.00%), Postives = 418/858 (48.72%), Query Frame = 0
Query:   27 HVAAALEPALPQTLQQASHGLMTFLQPNALASRAASFQLARGRVATRSAAPKRPLSGE-----EVAAGRPMREGSRFSTSSVGV----LNADGGASDRLATTTAVDNAQHHPQPARVSPRPPSSSFPAIPTLKVQTGTQVGGGDALGSEPQHLEPQALASSITRVHAVGGDFST-----GEKEKETNRSATLTGSDRRPWRETVEDASTITTRQNGDEFGQRGVEAEAAAAAGSAAFSTAEEDGGGEWCPVAARASACEAVPQLTQAFRSFDEKHPGATIIYLAHSGSRLYGTSTPKSDIDVKGIFIPDVRMEQGARRAAKEAAEAGAELEEIEEGVTVXXXXXXXXXXXXXXXAGDVIEGPSAVAPAPPSGPPPFTASSGKSEEGEDVTFWYSTGDTTSTNTMDDIDVELISLVRFFGQLRRAEVGGVETLHSMLVEDIALITDPE-----------IVPLILRERRWMVSKQLTSWVGLILSHLNKYRKVNHKSNVAR--EKAQKRKRELNMAALRKARDSAPSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSFSN----TNSIA------ASTGDGENTSSLREEVGQESKLLGDTSSSKAGPQGDAVPRGARKLG----VSSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXAA------------GVENGVFSVEPXXXXXXXXXXVKVVNGEAGDN-------------TETGEEXXXXXXXXXXXXXXXXEVIELARRVRRGKLLLHARRGVMEAKELLTTGRIVFPLRPQYVKELLRLKELDFHPRKISIIQAQAKRLSDIAATSALPLDVSHDKLAAVEDEVMELHTRRRHRRLSILEALE 818
            H A A + AL  TLQ        FL+P+   S AA F+ A  R  TR  A  + L G      +VAA     E + FS    G      + +GG         A+      PQ AR+S    S S    P   V+ G+  G     G +    +  ++          GG  S+     G + +   R A     D  P      DA+      N D  G    + E             E+ G GEWCP  ARASACE VPQLT+AFR FDEKHPGATIIYLAHSGSRLYGT+T KSD+D+KGIFIPDV+ E+ ARRAA +  +A A+ + +                      GD      A     PS   P  +  G S +G+++TFWYST +  S NT+DD+DVE+ISL RFFGQL R E+GGVETLHSMLV D+ LI+DPE           IVP+++RERRWMVS +L SW+G ILSH++KYR+V  +SN AR   KA  RKR L+ AA  K+  +A    XXXX                              P  +      N +A      ASTG     +S    +     L   T++++   +  +    AR+ G    VSSRGG                                         VE+      P            V +  A  +              +    XXXXXXXXXXXXXXXX   E AR ++RGKLL+HARRGVMEA+ELLT GR+ FPL+P+YV+EL RLKELD  P+K+S IQAQAK+LS +AATS LP  VS +KL AV++EVM +H +RR R +  L A+E
Sbjct:   44 HHATARQSALLYTLQTGRR-TTEFLKPSGPVSHAAPFRSAWERAITRRQATTQRLVGVSNGEGQVAAAGWCNEDALFSAGDGGSHARRRHRNGGGRAGRDLALAMSAVGRPPQLARLSWPTASLSSYTRPDAHVEAGSSGGNVPGPGHDLASKQGVSIPEGGVSATREGGVESSAAPGAGSRRQVAGREARAAIGDAGPAAADATDAAVAVGEGNDDRLGWGVTDEE-------------EKGGDGEWCPRVARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEKEARRAAAQV-KAVAKAQNM---------------------GGDTAVPGDAKEARMPSSSSPALSPKG-SGKGKEITFWYSTSNCDSRNTVDDVDVEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEVYVPKYILRKQIVPIVVRERRWMVSSRLASWMGFILSHIHKYRRVTQESNAARFRHKAFLRKRSLSAAA--KSLPAAXXXXXXXXGPTSTGPGDAAPTGEGISNATNRATTVSVAPQAAVGVRVENRVADRPAETASTGTDTGDNSSLNLISASGTLEASTTATETQSKRVSPEEPARQAGDLPRVSSRGGGGEGAGEKSTAVDTAPAGVAVSKIPPVRRLGVIGRTKAPRAVEDAAPEEAPRLGVISRPGTRDVESRGAASSQGARRLGVLSRGGVKMXXXXXXXXXXXXXXXXXXXXXKETARTLKRGKLLMHARRGVMEAEELLTAGRLTFPLKPRYVEELRRLKELDMGPKKLSSIQAQAKQLSAVAATSGLPAQVSMEKLRAVQEEVMRVHDQRRRRGVGPLPAVE 862          
BLAST of mRNA_P-littoralis_Contig209.7.1 vs. uniprot
Match: D7G3H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H5_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 5.150e-59
Identity = 201/528 (38.07%), Postives = 262/528 (49.62%), Query Frame = 0
Query:  294 YLAHSGSRLYGTSTPKSDIDVKGIFIPDVRMEQGARRAAKEAAEAGAELEEIEEGVTVXXXXXXXXXXXXXXXAGDVIEGPSAVAPAPPSGPPPFTASSGKSEEGEDVTFWYSTGDTTSTNTMDDIDVELISLVRFFGQLRRAEVGGVETLHSMLVEDIALITDPEIVPLILRERRWMVSKQLTSWVGLILSHLNKYRKVNHKSNVAREKAQKRKRELNMAALRKARDSAPSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSFSNTNSIAASTGDGENTSSLREEVGQESKLLGDTSSSKAGP---QGDAVPRGARKLGVSSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVENGVFSVEPXXXXXXXXXXVKVVNGEAGDNTETGEEXXXXXXXXXXXXXXXXEVIELARRVRRGKLLLHARRGVMEAKELLTTGRIVFPLRPQYVKELLRLKELDFHPRKISIIQAQAKRLSDIAATSALPLDVSHDKLAAVEDEVMELHTRRRHRRLSILEALE 818
            YLAHSGSRLYGT+T KSD+D+KGIFIPDV+ E+ ARRAA +  +A A+ ++   G T                    + G +  A  P S  P  +     S +G+++TFWYST +  S NT+DD+D+E+ISL RFFGQL R E+GGVETLHSMLV D+ LI+DPE        +   VS +  +             +V+ +        QK K          A D+AP+                                    P       I         T  +++   +E+  LG  S    G    +G A  +GAR+LGV SRGG                                                             + G EXXXXXXXXXXXXXXXX   E AR ++RGKLL+HARRGVMEA+ELLT GR+ FPL+P+YV+EL RLKELD  P+K+S IQAQAK+LS +AATS LP  VS +KL AV++EVM +H +RR R +  L A+E
Sbjct:  225 YLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEEEARRAASQV-KAVAKAQQDMGGDTA-------------------VPGDAKEARVPSSSSPALSPKG--SGKGKEITFWYSTSNCDSRNTVDDVDLEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEASTTAAEMQNKRVSAEEPA------GEAGDPSRVSSRGGGGEGAGQKSK----------AVDTAPA----------------------------WVAVGDKEPPVRKLGVIGRKKAP---TRVVKDVAPEEAPRLGVMSRPGTGDVESRGAASSQGARRLGVLSRGG------------------------------------------------------------VKMGGEXXXXXXXXXXXXXXXXXXKETARTLKRGKLLMHARRGVMEAEELLTAGRLSFPLKPRYVEELRRLKELDMGPKKLSSIQAQAKQLSAVAATSGLPAQVSMEKLRAVQEEVMRVHDQRRRRGVGPLPAVE 623          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig209.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6L3_9PHAE5.690e-10438.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3H5_ECTSI5.150e-5938.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 683..714
NoneNo IPR availableCOILSCoilCoilcoord: 328..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..703
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..582
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..703
IPR018775RNA repair pathway DNA polymerase betaPFAMPF10127RlaPcoord: 278..327
e-value: 7.9E-8
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig209contigP-littoralis_Contig209:55661..64444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig209.7.1mRNA_P-littoralis_Contig209.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig209 54054..64686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig209.7.1 ID=prot_P-littoralis_Contig209.7.1|Name=mRNA_P-littoralis_Contig209.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=819bp
MWPLVQTALLLMQLHYCCSSNNMLRHHVAAALEPALPQTLQQASHGLMTF
LQPNALASRAASFQLARGRVATRSAAPKRPLSGEEVAAGRPMREGSRFST
SSVGVLNADGGASDRLATTTAVDNAQHHPQPARVSPRPPSSSFPAIPTLK
VQTGTQVGGGDALGSEPQHLEPQALASSITRVHAVGGDFSTGEKEKETNR
SATLTGSDRRPWRETVEDASTITTRQNGDEFGQRGVEAEAAAAAGSAAFS
TAEEDGGGEWCPVAARASACEAVPQLTQAFRSFDEKHPGATIIYLAHSGS
RLYGTSTPKSDIDVKGIFIPDVRMEQGARRAAKEAAEAGAELEEIEEGVT
VTVTVAAAAAAAAAAAAGDVIEGPSAVAPAPPSGPPPFTASSGKSEEGED
VTFWYSTGDTTSTNTMDDIDVELISLVRFFGQLRRAEVGGVETLHSMLVE
DIALITDPEIVPLILRERRWMVSKQLTSWVGLILSHLNKYRKVNHKSNVA
REKAQKRKRELNMAALRKARDSAPSVPIPVPVPVPVPVPASASASTSRST
PTSMSTSTGATPSFSNTNSIAASTGDGENTSSLREEVGQESKLLGDTSSS
KAGPQGDAVPRGARKLGVSSRGGGAPGVAGSSREVRRLGVLTRGGGAEVA
AGVENGVFSVEPRRLGVLSRGGVKVVNGEAGDNTETGEEEEEEEEELEEQ
DERKEEVIELARRVRRGKLLLHARRGVMEAKELLTTGRIVFPLRPQYVKE
LLRLKELDFHPRKISIIQAQAKRLSDIAATSALPLDVSHDKLAAVEDEVM
ELHTRRRHRRLSILEALE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018775RlaP