|
|
Homology
BLAST of mRNA_P-littoralis_Contig209.7.1 vs. uniprot
Match: A0A6H5L6L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L3_9PHAE) HSP 1 Score: 351 bits (900), Expect = 5.510e-100 Identity = 326/858 (38.00%), Postives = 418/858 (48.72%), Query Frame = 3
Query: 321 HVAAALEPALPQTLQQASHGLMTFLQPNALASRAASFQLARGRVATRSAAPKRPLSGE-----EVAAGRPMREGSRFSTSSVGV----LNADGGASDRLATTTAVDNAQHHPQPARVSPRPPSSSFPAIPTLKVQTGTQVGGGDALGSEPQHLEPQALASSITRVHAVGGDFST-----GEKEKETNRSATLTGSDRRPWRETVEDASTITTRQNGDEFGQRGVEAEAAAAAGSAAFSTAEEDGGGEWCPVAARASACEAVPQLTQAFRSFDEKHPGATIIYLAHSGSRLYGTSTPKSDIDVKGIFIPDVRMEQGARRAAKEAAEAGAELEEIEEGVTVXXXXXXXXXXXXXXXAGDVIEGPSAVAPAPPSGPPPFTASSGKSEEGEDVTFWYSTGDTTSTNTMDDIDVELISLVRFFGQLRRAEVGGVETLHSMLVEDIALITDPE-----------IVPLILRERRWMVSKQLTSWVGLILSHLNKYRKVNHKSNVAR--EKAQKRKRELNMAALRKARDSAPSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSFSN----TNSIA------ASTGDGENTSSLREEVGQESKLLGDTSSSKAGPQGDAVPRGARKLG----VSSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXAA------------GVENGVFSVEPXXXXXXXXXXVKVVNGEAGDN-------------TETGEEXXXXXXXXXXXXXXXXEVIELARRVRRGKLLLHARRGVMEAKELLTTGRIVFPLRPQYVKELLRLKELDFHPRKISIIQAQAKRLSDIAATSALPLDVSHDKLAAVEDEVMELHTRRRHRRLSILEALE 2696
H A A + AL TLQ FL+P+ S AA F+ A R TR A + L G +VAA E + FS G + +GG A+ PQ AR+S S S P V+ G+ G G + + ++ GG S+ G + + R A D P DA+ N D G + E E+ G GEWCP ARASACE VPQLT+AFR FDEKHPGATIIYLAHSGSRLYGT+T KSD+D+KGIFIPDV+ E+ ARRAA + +A A+ + + GD A PS P + G S +G+++TFWYST + S NT+DD+DVE+ISL RFFGQL R E+GGVETLHSMLV D+ LI+DPE IVP+++RERRWMVS +L SW+G ILSH++KYR+V +SN AR KA RKR L+ AA K+ +A XXXX P + N +A ASTG +S + L T++++ + + AR+ G VSSRGG VE+ P V + A + + XXXXXXXXXXXXXXXX E AR ++RGKLL+HARRGVMEA+ELLT GR+ FPL+P+YV+EL RLKELD P+K+S IQAQAK+LS +AATS LP VS +KL AV++EVM +H +RR R + L A+E
Sbjct: 44 HHATARQSALLYTLQTGRR-TTEFLKPSGPVSHAAPFRSAWERAITRRQATTQRLVGVSNGEGQVAAAGWCNEDALFSAGDGGSHARRRHRNGGGRAGRDLALAMSAVGRPPQLARLSWPTASLSSYTRPDAHVEAGSSGGNVPGPGHDLASKQGVSIPEGGVSATREGGVESSAAPGAGSRRQVAGREARAAIGDAGPAAADATDAAVAVGEGNDDRLGWGVTDEE-------------EKGGDGEWCPRVARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEKEARRAAAQV-KAVAKAQNM---------------------GGDTAVPGDAKEARMPSSSSPALSPKG-SGKGKEITFWYSTSNCDSRNTVDDVDVEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEVYVPKYILRKQIVPIVVRERRWMVSSRLASWMGFILSHIHKYRRVTQESNAARFRHKAFLRKRSLSAAA--KSLPAAXXXXXXXXGPTSTGPGDAAPTGEGISNATNRATTVSVAPQAAVGVRVENRVADRPAETASTGTDTGDNSSLNLISASGTLEASTTATETQSKRVSPEEPARQAGDLPRVSSRGGGGEGAGEKSTAVDTAPAGVAVSKIPPVRRLGVIGRTKAPRAVEDAAPEEAPRLGVISRPGTRDVESRGAASSQGARRLGVLSRGGVKMXXXXXXXXXXXXXXXXXXXXXKETARTLKRGKLLMHARRGVMEAEELLTAGRLTFPLKPRYVEELRRLKELDMGPKKLSSIQAQAKQLSAVAATSGLPAQVSMEKLRAVQEEVMRVHDQRRRRGVGPLPAVE 862
BLAST of mRNA_P-littoralis_Contig209.7.1 vs. uniprot
Match: D7G3H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H5_ECTSI) HSP 1 Score: 223 bits (568), Expect = 4.810e-58 Identity = 201/528 (38.07%), Postives = 262/528 (49.62%), Query Frame = 3
Query: 1122 YLAHSGSRLYGTSTPKSDIDVKGIFIPDVRMEQGARRAAKEAAEAGAELEEIEEGVTVXXXXXXXXXXXXXXXAGDVIEGPSAVAPAPPSGPPPFTASSGKSEEGEDVTFWYSTGDTTSTNTMDDIDVELISLVRFFGQLRRAEVGGVETLHSMLVEDIALITDPEIVPLILRERRWMVSKQLTSWVGLILSHLNKYRKVNHKSNVAREKAQKRKRELNMAALRKARDSAPSVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSFSNTNSIAASTGDGENTSSLREEVGQESKLLGDTSSSKAGP---QGDAVPRGARKLGVSSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXAAGVENGVFSVEPXXXXXXXXXXVKVVNGEAGDNTETGEEXXXXXXXXXXXXXXXXEVIELARRVRRGKLLLHARRGVMEAKELLTTGRIVFPLRPQYVKELLRLKELDFHPRKISIIQAQAKRLSDIAATSALPLDVSHDKLAAVEDEVMELHTRRRHRRLSILEALE 2696
YLAHSGSRLYGT+T KSD+D+KGIFIPDV+ E+ ARRAA + +A A+ ++ G T + G + A P S P + S +G+++TFWYST + S NT+DD+D+E+ISL RFFGQL R E+GGVETLHSMLV D+ LI+DPE + VS + + +V+ + QK K A D+AP+ P I T +++ +E+ LG S G +G A +GAR+LGV SRGG + G EXXXXXXXXXXXXXXXX E AR ++RGKLL+HARRGVMEA+ELLT GR+ FPL+P+YV+EL RLKELD P+K+S IQAQAK+LS +AATS LP VS +KL AV++EVM +H +RR R + L A+E
Sbjct: 225 YLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEEEARRAASQV-KAVAKAQQDMGGDTA-------------------VPGDAKEARVPSSSSPALSPKG--SGKGKEITFWYSTSNCDSRNTVDDVDLEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEASTTAAEMQNKRVSAEEPA------GEAGDPSRVSSRGGGGEGAGQKSK----------AVDTAPA----------------------------WVAVGDKEPPVRKLGVIGRKKAP---TRVVKDVAPEEAPRLGVMSRPGTGDVESRGAASSQGARRLGVLSRGG------------------------------------------------------------VKMGGEXXXXXXXXXXXXXXXXXXKETARTLKRGKLLMHARRGVMEAEELLTAGRLSFPLKPRYVEELRRLKELDMGPKKLSSIQAQAKQLSAVAATSGLPAQVSMEKLRAVQEEVMRVHDQRRRRGVGPLPAVE 623
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 1211280.J7I4D0_9CAUD |
| Model size | 4306 |
| Max annot lvl | 10662|Myoviridae |
| Hectar predicted targeting category | signal peptide |
| Exons | 7 |
| Evalue | 0.000444 |
| EggNOG OGs | 4QC2N@10239|Viruses,4QX55@35237|dsDNA viruses no RNA stage,4QQEW@28883|Caudovirales,4QIM3@10662|Myoviridae |
| Description | Predicted nucleotidyltransferase |
| Cds size | 2457 |
| COG category | S |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790013.260756-UTR-P-littoralis_Contig209:54053..55660 | 1680790013.260756-UTR-P-littoralis_Contig209:54053..55660 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig209 54054..55660 - |
| 1680790013.3529525-UTR-P-littoralis_Contig209:64444..64686 | 1680790013.3529525-UTR-P-littoralis_Contig209:64444..64686 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig209 64445..64686 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680790013.2719116-CDS-P-littoralis_Contig209:55660..55852 | 1680790013.2719116-CDS-P-littoralis_Contig209:55660..55852 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 55661..55852 - |
| 1680790013.2809-CDS-P-littoralis_Contig209:57419..58307 | 1680790013.2809-CDS-P-littoralis_Contig209:57419..58307 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 57420..58307 - |
| 1680790013.2899933-CDS-P-littoralis_Contig209:58507..58588 | 1680790013.2899933-CDS-P-littoralis_Contig209:58507..58588 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 58508..58588 - |
| 1680790013.3027391-CDS-P-littoralis_Contig209:59153..59420 | 1680790013.3027391-CDS-P-littoralis_Contig209:59153..59420 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 59154..59420 - |
| 1680790013.3125706-CDS-P-littoralis_Contig209:60062..60213 | 1680790013.3125706-CDS-P-littoralis_Contig209:60062..60213 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 60063..60213 - |
| 1680790013.327648-CDS-P-littoralis_Contig209:61225..61922 | 1680790013.327648-CDS-P-littoralis_Contig209:61225..61922 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 61226..61922 - |
| 1680790013.3384852-CDS-P-littoralis_Contig209:64263..64444 | 1680790013.3384852-CDS-P-littoralis_Contig209:64263..64444 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig209 64264..64444 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig209.7.1 >prot_P-littoralis_Contig209.7.1 ID=prot_P-littoralis_Contig209.7.1|Name=mRNA_P-littoralis_Contig209.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=819bp
MWPLVQTALLLMQLHYCCSSNNMLRHHVAAALEPALPQTLQQASHGLMTF
LQPNALASRAASFQLARGRVATRSAAPKRPLSGEEVAAGRPMREGSRFST
SSVGVLNADGGASDRLATTTAVDNAQHHPQPARVSPRPPSSSFPAIPTLK
VQTGTQVGGGDALGSEPQHLEPQALASSITRVHAVGGDFSTGEKEKETNR
SATLTGSDRRPWRETVEDASTITTRQNGDEFGQRGVEAEAAAAAGSAAFS
TAEEDGGGEWCPVAARASACEAVPQLTQAFRSFDEKHPGATIIYLAHSGS
RLYGTSTPKSDIDVKGIFIPDVRMEQGARRAAKEAAEAGAELEEIEEGVT
VTVTVAAAAAAAAAAAAGDVIEGPSAVAPAPPSGPPPFTASSGKSEEGED
VTFWYSTGDTTSTNTMDDIDVELISLVRFFGQLRRAEVGGVETLHSMLVE
DIALITDPEIVPLILRERRWMVSKQLTSWVGLILSHLNKYRKVNHKSNVA
REKAQKRKRELNMAALRKARDSAPSVPIPVPVPVPVPVPASASASTSRST
PTSMSTSTGATPSFSNTNSIAASTGDGENTSSLREEVGQESKLLGDTSSS
KAGPQGDAVPRGARKLGVSSRGGGAPGVAGSSREVRRLGVLTRGGGAEVA
AGVENGVFSVEPRRLGVLSRGGVKVVNGEAGDNTETGEEEEEEEEELEEQ
DERKEEVIELARRVRRGKLLLHARRGVMEAKELLTTGRIVFPLRPQYVKE
LLRLKELDFHPRKISIIQAQAKRLSDIAATSALPLDVSHDKLAAVEDEVM
ELHTRRRHRRLSILEALE* back to topmRNA from alignment at P-littoralis_Contig209:54054..64686- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig209.7.1 ID=mRNA_P-littoralis_Contig209.7.1|Name=mRNA_P-littoralis_Contig209.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10633bp|location=Sequence derived from alignment at P-littoralis_Contig209:54054..64686- (Pylaiella littoralis U1_48)
TGTACTTCTTTCATATCTGCATTCACGGACCTCCAAGCAAGGTCTGATGC
AGCAGAGTCACAGAGAAGGCTGTGTAGGCTGTGGACCGTAGGCTGCAGGC
ACGCTACTGCATTCCAGAGGAAGGCTTCCGCATATTTCTTGATGCTCCGG
AAGTGCACCCGCTGAGGGCTCCGAGCAGCCAGTGGTGCGCTATCAGCTTC
GAGTATCTAGCGGCATTTGAAGGAGGCGGAAGAACGGAACTGATGTGGCC
TCTTGTTCAAACAGCACTGCTGCTGATGCAGTTACACTACTGTTGTTCCA
GTAACAACATGCTCCGTCATCACGTCGCTGCTGCCCTGGAGCCGGCGCTG
CCGCAAACGCTACAACAAGCTAGTCACGGTCTGATGACGTTCTTGCAGCC
AAATGCCCTTGCGAGTCGTGCTGGTGAGTGCGGCCGTTCACTCGCCTTGC
AAAGGCCTCTTCTTGAAAGCTGCAGAGAAGGGATCCATAGAGGAGTTCAA
ATAGATGTGATTGAGGTACGTTGGTGCTTGGCATTCTGCTCTCGCAAGGC
TTCAACGACCTCCCCCCGCCTATGATTGGCTGGCTGGGGAGGGCCAGCCA
ATCATAGGCTGGGGATTTGGCTGAAAATTTTAGGCCGGGGCTTGACTGTA
AAAACAAATGAAAGTCCTCTCCAAAAATCTCGGCATCCCAAGGTATTCCG
CCGCGGGGAACACTTCTCTTGCCCGAGGTTTTTAGACTGGGGGAGGACCA
CAGCAGCAACAGCAGTACAGCAGTATTCCATCAAACTACCTCCTCTGGTG
CGCAGCTGTATGTCAGGCCTGATGACACGACGTGTAAATAAGGACGGCGG
ACCAATCTCTTTCTCCCCTCCCCGCGAGCAAAACAACCTTTCTCAGACCG
GTGCTGCTGTTGGCGACCCAGAAAAAACACATCGTGACTGACTGCTGTAA
GCTAGATCCATCCATGACCGAAAGCGTTTTTCTGAAACGTATGTTCTACT
GAGTATGATGATACTACCACTACTACTGCTGCTGCTGCTGTAGTACTGCT
GCTGTGTAGTAGTAGTGTAGTAGTACAGCTGTATGATAGACTCACACGTA
CATACATGTGCGCGAAAGACGAAGCTATATCTCGCCCACCCTTCAGAAGT
AGTCGTAGGCAGATAGGTCCGCTCGTCGTAGTCTTTGCGAGCAAGTATTC
CGTGAAAACGTGACGTACAAATATCGACGAAGGATATGGCCCTACAGCAC
AGCAAGCAGCAGCAGTAGTAGTAGTCGTGAAAACATATTTTTCTCGCTGC
GCACGGGACCCGACGACCTAAAAACTTGGCCGTGCCAGATAGAAAATAGA
CTCATCTCTCTAGGGGTGTAGTTGGCATCGAGTTACAAACCCTTTTTGGG
CGAGATATGTGCGACTTTTGATATGCAACATCTGTGCCAGCACAAGGACA
AGAGTTCCTCTGCCGTCCCCCATCCGGGGTCCGCCGCTTGCTTTCGTAGA
TTTCACAGTGATGGAATGACCTGGAATAGCCAATCTACGCTGTTCCTTGG
TGGAACAGAGGAATGTTCCTCCTCACCCAAACAACAAGTATTTTTTGCGG
CCAGCGAAGCTTTCCAGGAACATCAAACGTACAGCGGTCAGGGGGGATAC
CGCCAAGGGTTTTCAATCTACAAAGTTGACATGTAAGGGGGGGGAAATAT
TGTTGAAGTAAAAATACCATCACGGAGCCCCGGGATACTGGGGACGGCTC
CCGCCCAGCGTTGCTTCAGCCCCGCAATTGCATCTGTCTGCTGAGTCATG
TGGCGTATTCGCAACGACATCTCTGTCGTTCTGTTGTTCGGGGTGCCTGC
TACTCTGTCTTCATGGCTACAGTTTGGAAAGTTGGTCACGATTGGCTCCT
CTTCGAACAGAGCATGATAAAAGGAAATCAGAAATCAACAGGGAAGAAGG
TGTTCTTCGGTTTTCGTCGTGGTGTTTATTCACTGCATCTCGGTCACGAC
AGAGCTAGACCCGGCGTCACCAGTAGTGGAGGGCAAGGAGACACTGATGG
ACAGCCATAAGCAAGCAGCCGTGCCAAAGCAGCACGAGACCCTTGACGCG
CGCACCAGCCACTCCTCGCGCCTTATCCTTCTACGTAATCGATTTTGACA
TGACGTGTTGCATGTGGCATAGTTGCATGCCGCCGCCCTCGCCGGGGGCA
CAGACGGATCATTTGGAAGGCGACGCGGCACCCCGAAACTCAAAACAGAG
ATCCAGGAGCAACGCGCACATGAAGCTCGCCTTGAACAATCACGAGCGGG
AAGCCTCAGACCCAACGCCTTCGACCCGCGAAATTTAAGGAAACCACACC
CATATCTGCCTGTTTTTGATACCGAAAAATAGCAAATGCGAAGATGATAT
CCTGGGAGTCGAGCACAGTTGTACCCGTCACGCGTGTATCATATCAGCGA
GTAGTCCCAAAGCAAACGACCTCAAGACGACGGCAACACGTTCTTCGCGG
GGGGTCGCGACTGAAACAGAGCAGCATGTTTAACTTTTGTTTTCCGCTGC
TGCTTGTGAAGTATCATCACCCCACACCGACACTGCTGCGCTCGAAATGA
CTGTACAAGCGAGGGGCGCAAACGCGCACGTCGTGCATCGCACGAGTGAA
CAACATTCTGCTTCGTATACGTAGACGTTTGTATCACACTCAGCGACCAA
TTTGTTGCGTGTGCCCCTTCTCAATCGCGTTTTTCGTTGGCGCCTCCTGC
GGACACTCCTGTAGCTTCTTTCCAGCTCGCTCGGGGGAGGGTAGCCACGC
GGTCAGCCGCGCCCAAGAGGCCCCTCTCGGGAGAGGAGGTAGCAGCGGGA
CGACCGATGAGGGAGGGATCCAGGTTTTCCACAAGCTCCGTGGGCGTTTT
GAATGCTGACGGTGGGGCAAGCGATCGGCTGGCTACGACGACAGCGGTAG
ACAACGCCCAACACCACCCACAACCGGCGCGCGTCTCGCCGCGGCCACCA
TCGTCGTCCTTTCCAGCAATACCGACGTTGAAGGTGCAGACGGGGACCCA
AGTCGGGGGTGGCGACGCGTTGGGATCGGAGCCGCAGCACCTAGAACCAC
AAGCCCTCGCTTCTTCGATAACCAGAGTTCACGCCGTCGGAGGTGATTTC
TCCACCGGCGAAAAGGAAAAAGAAACAAATCGCTCGGCGACTCTGACGGG
AAGCGACCGGCGGCCGTGGCGGGAAACGGTGGAGGACGCTTCAACAATCA
CTACGCGGCAGAACGGTGACGAATTTGGGCAGCGTGGGGTGGAGGCAGAA
GCAGCAGCAGCAGCAGGAAGCGCTGCTTTTTCTACCGCAGAGGAGGACGG
GGGCGGGGAGTGGTGTCCTGTTGCGGCAAGGGCTAGCGCGTGCGAGGCCG
TTCCTCAACTGACCCAGGCCTTTCGGAGTTTCGACGAGAAACATCCCGGT
GCCACCATCATGTAAGCGAAGAGCAGGATGAGAGCCTTCGTGTGCGGCAG
CATAAGTGACGGTTCGGATGATATCATACCTCTCCCCGGTGTTTGTTGTG
AGTGTTGGCGGTGCGCTTGTTTTCCCTTTCTTTTTTCTGTTAGTCAAGTC
AGCGTGAGGCAGGCATCTACATTCTTCTGAGTTTTTTCAACCGCCTGAGA
ACAGAGTGAGGACGCTATCTGCCTTGTTCGGGTGATGGCGATAGCCATAC
CCTTTGTGGTGTTTGCAGCCCTAAATCGCTTTCATTACCTCTGGTTTGCT
GGTTGGTTTGGTTCTGTAGCCTTTCGTCCGTGAACCTTTCAAAATATTAC
TGGATCTCTAAGAGTAGGGGTGCTATCACCCGCGGCAGATTACGGCACTT
TTTTTCGGACTGGAACCCCGTTGCCCCCGGTCATAGGATGAAGCCATTCT
ATTATTGTGATTGGAGCCGGCCCCAGCTTCGGTGGGATCTATGGTGGTAC
GAGAGGTATTTTTTATCGATAACATATGAAACCCGAAAAGGGGTACATGT
GCATTTTACGATATCCCCATCATGTCACCAGGAACAGGTAACTTGGATGA
TGGTGCTGCTGTGTATCATATACCCGCAGGTAAAAGAAGTCCTCGATCGA
TTCTATTTGCGTAAATCCGACCCCTCAGCATGCCATGGCAGCACGAACAG
CCTCAGCATGTCATGGCAGCACGGACAGTCGATCAAGTTTTACGTTTCGC
TGACTTGGTACTGCTGTAGGAGTCGAAATGTTTACTTCACTCACTCTTCT
GCTCGCCGCGAAGCTGACGAGACTTTTCAGCGAGTACTCTCCTCGCCTTG
GGGGGCGTTTAGTCGGCGCTACGTAGCAACGGAGATGCGTTCTCCACCCG
CAACACACGCACACGCACACGCACACGCACACGCATATGCATATCAACAC
CCTGAGCCTTCTCCCAGCCTGAGCCCCTAAATCTCTGTTCCTCTGTACGC
GGTTCCCTTCGTCTCCCGTCCAGCTACCTCGCGCACTCGGGGTCCCGCCT
GTATGGCACCAGCACGCCGAAATCGGACATCGACGTCAAGGGAATTTTCA
TCCCGGACGTGCGCATGGAGCAGGGAGCTCGCCGGGCGGCCAAAGAGGCC
GCGGAAGCTGGGGCTGAGCTCGAGGTGCGGTCATTTTTTCTTCGGCAGTC
TCTTGGGGGAGGGGGGGGGGCGGGGGTATGCATCCGATTGCCATGCATAC
TCGCAACTATGTGCAGCAGTAGCGTTGCGTATAAAAGGTGCTCGCGTCCC
TCGAGAGCCGGGATGAAACGCGTCAGGTTTTCGCACGCTTTGTATTTGTG
GCGTTGATACTGTTTGCTAGTAGGTTGTGTTGCTCTTGTCTACCCGTTTA
TTCTGTGCGGCAGTCAAAATCTCTTGATATGAGTTGGGCGAACCAGCCGG
GGTGAAACGGAAGGAAGGTCGACACAGGAGCCTTTCCCATTTCTGTTTCT
CCACTTTCCTCCTGCTGTGCTTGTGTTAAAAATTTGAGAAAGGGTTCCAC
CATTCCTGTCTGCTCTCGTCGGCTTTTTTCGAGTACGAAGTAGAATTTTT
TCTTCACGAAACAAATCGCTTTTCACTCCTAGGTTCTGGGTAGGAAAACT
CCGACCGGCACTTGTAGTTCACAAGACCTACAGCGGTGGGTGTCAGAGTG
CTTACCCACGAAAGGACCACCTGGGCGACCGGCCAGTAGCAGTGAGTGAA
ATTCATCATATCGAAAATGTATTTGTTTCCCAGCTGCGAGTGCACCCCCT
CTCATTGAAAAAATAGGAAATCGAAGAAGGGGTCACTGTCACTGTCACTG
TCGCTGCCGCTGCCGCTGCCGCTGCCGCCGCCGCCGCCGGGGATGTGATC
GAGGGACCGAGTGCTGTCGCTCCGGCCCCTCCTTCCGGCCCACCACCCTT
TACCGCGAGCAGCGGCAAATCGGAGGAGGGTGAGGACGTCACGTTCTGGT
ACTCGACCGGAGACACCACTTCCACGAACACGATGGACGACATCGACGTG
GAGCTCATTAGCCTCGTCAGATTCTTCGGCCAAGTGAGCCAGCCAGTCTC
AATTATGTCCGGTCGTTCTGATTCGTCCACATGTGCTCTCTCGATCGAGC
GCAGGATGGCCTGGGTGATTTGAATTTTTGAATTTTCATAAAAGATTTTG
GTTAGATTGGAGTTACATGGGCTGTCTTCGCATGAAGCCCGGTTGTTACC
CGTTTAGGCAACAGAGGCAATGATGCACAGTATTTTGCAACACACCACCC
ACCCGCGGCACAGTATTTTGCGACACACCACACACCCGCGGCCGTCGACT
GAAATATATATATACGAAGTACGAAGTACTTCGAAGTACGGAGTATATTG
CAAGGGATCCCCATCGCCGCCACAACGCACAGCGCGTAGAGTGTCCGCTG
CTCTTCGGAATGGTGCTGACCGTGCCCAAGCCAAAAAGAGATGTCGCGGT
GCGTGTCGCCGACTCCAGCAGGAGCGTTGGCGTGTGCCGGGAGTGAGTGG
CATCATTTTTGCGCTCACACATGTAGCGGTAATAATTTCCCCATCGCGTA
TCCAACCCTGTTCAATATTGCGTATCCTCGTACGTACGTAACGCGCAGCT
GCGCCGGGCAGAGGTCGGGGGCGTGGAGACCCTCCACTCCATGCTGGTCG
AAGACATCGCCCTCATCACGGACCCAGAGGTACATCATGCCACGCGCGCA
CGGGATGGGTGTAGAGAGGGAAGATAATTTTTCGTGGACGGTGCCCGGAG
TCGGCGGTTGCTGGTAAGTGTGCTGGTAGGTGTCATGATATGATATGATA
CCCCGTATACGTGTTGTCGAAAAATCTGCGTGCGAATCTCTCCCCCTCCC
CCTTTTGGGCTTCCTCGCTCTCCGATCAGATCGTGCCGCTCATCCTGAGA
GAGCGGCGCTGGATGGTGTCGAAGCAGCTGACGAGCTGGGTCGGGCTTAT
CCTCAGCCACCTCAACAAGTACAGGAAGGTCAACCACAAGTCAAACGTGG
CTCGGGAGAAGGCCCAGAAGAGGAAGCGCGAGCTCAACATGGCCGCCCTG
CGCAAGGCCAGAGATTCCGCGCCTTCGGTTCCGATTCCTGTTCCTGTTCC
TGTTCCTGTTCCTGTTCCGGCTTCGGCATCGGCGTCAACGTCAAGGTCGA
CGCCAACGTCAATGTCAACGTCGACAGGAGCGACACCTTCTTTTTCAAAC
ACGAATTCGATAGCGGCTTCGACCGGCGACGGGGAGAATACCTCGAGCCT
GCGAGAAGAAGTGGGACAGGAGAGCAAGCTCTTGGGTGATACGTCCAGCA
GTAAGGCGGGGCCTCAAGGTGACGCGGTTCCTCGGGGGGCCCGAAAGTTG
GGGGTTTCATCTAGAGGGGGTGGTGCGCCGGGTGTAGCAGGTTCTTCTCG
GGAGGTCCGAAGGCTGGGCGTTTTAACTCGGGGGGGGGGTGCGGAGGTCG
CGGCGGGGGTAGAAAACGGCGTTTTCTCTGTGGAGCCTCGACGATTAGGC
GTCCTGTCCAGAGGGGGTGTGAAGGTGGTTAATGGCGAGGCGGGCGACAA
CACCGAGACGGGCGAGGAGGAGGAGGAGGAGGAGGAGGAATTAGAAGAGC
AGGACGAGAGGAAAGAGGAGGTGATAGAGTTAGCGAGGAGAGTTAGGCGC
GGGAAGCTGCTGCTGCACGCCAGGAGAGGGGTGATGGAGGCCAAGGAGCT
GCTGACCACGGGCAGGATCGTGTTTCCGTTGAGACCGCAATACGTCAAGG
AGCTCTTGCGCTTGAAGGTGGGCATGTTGTGTTTTTGGGTGTTCATATCA
TAGTCGATGTCTTTACCACTTTACCACCTGTAAACATTTTGCACACAAGT
CACGAATGATGAACTTCAGCCGTTCGGTGGTACGGATCCTTGGTACTTTA
CAAACAAGCAACTTCTAAAGATGGCTTGAGACGTTTTGTGATACCTCTGC
TTGAAAAGGATGCACTGCAATCGCAGGCAGGCACGGTGGCAGGTGATATG
TCATAGTGGATGTATAAAACACGGCTATGATGTGATAACTCTAAAAACTT
CTTCGTATTTATGCAGATCTGCCCGCACATGTGTGCTCTTTGGTCAACTA
GCCGACAGCGTTGCATTGTGCCCCCACATCCCCCCTTCAAATCTGGAGGG
TAGCGTCCACTGTACAACTGGAGCGTACCCCCGTCGCATACCTCAGTTGC
TGGTTTGCGTTGTACATAAATTTCCTGTCATACTTGTTCGAGATTTTCGT
TCCGTTTTCCGACAGAACAGCAGGGGTTTATCACCCGCGCCCCCCTTTCG
TTGCACCCTCTCTGCGCGCAGGTACGGCATGGAAACATTTCATATGCTCC
TACGTAACGCCCCTCTTTTCTGCACGAACGGCAGTCTGTTTTTTGTTTGC
TCCGAGAAGAGTGCCCACCCTCTTTTTCAGCACCATTATTTGCACACACA
CAGCACGCATTCAAGCATCACCCGGGTATGCCGGACATCGCAAAATATCG
AGCTTTGGTTGCACGTGGTTCGGCGCGAGGAAGCTGCTGTTGGCCGTTCG
CTTTGTGTGTTGCATTTCTTACATGAATCCAGTCAGCGCAGAGCGCCAGC
AGAGCGGATACATTTTAGTTTTTTTTTCGGCACAAAAGCAGAACCAGCAC
CAGTGACTTGGGCCTCCTTGCCGTCCCTCCCTGATGAATTTACACCAATG
ATCGTACCGTGTGTCTGTGAAGGCTGTCGTCTGTGCCCTGTAGTCACCGT
TCTTCGCTCCTTGCTCTGTGTGCAAGCACATTCCCTTCGCCCCGTTCACA
CACGGCATCAATCCCCCAGATGGGCTGCCTCTCATCCTGTCAAAAACAAC
AAGAGGATTGGCTGGCCGTTGAGCGATGCCATTTCGTCCGCCATATTTTC
CCAACCACTGCGATTCACAAGCACGGCCCCAACCACAGTTTGTTTTCGTA
TTTTCCAAATCTAACATAAAACGCCGATACTTTGGTATGGGTACTCGTAC
ATATTACCAAAATGCTACTGCTACTTACAGCTGTAGGAATGTTGGTGATT
CTTGCACAAGCTCACCACCACCGTAGTCTAGCCCGTGTTTTTTTCGTCTT
TTTTGAAATTGAACAAAAAACGATCATACTTTGGTATGGGTACTCCTACA
TATCACCAAAATTCTACTGCTAGCTCTAGGAATGTTGTTGTTTCTCACAT
CAGCTCACCACCACCGTAGCCTTCTAGGCCGCGGTCGCAAACCAGGCACA
TATTAATGCTACTTCGAATTGTTTTTTACTAGTAATGAGCTCTCCCTCCG
CGTGTTTTACCCACCCGCCCCTTAAAACAACCAGGAGTTGGACTTTCACC
CGAGGAAGATTAGTATCATCCAAGCGCAAGCTAAGAGGCTTTCCGACATC
GCTGCCACCTCCGCACTGCCCCTCGACGTCAGCCATGACAAGCTGGCGGC
GGTAGAAGACGAGGTGATGGAGTTGCACACCCGCCGAAGACATCGACGGC
TCTCCATCCTGGAGGCTTTAGAATAGTTGCCCCGGGGGGGAGGTGAAATC
GCCACCCCGGTCTGCGGCACAACTTTTTTTTCTGCGCCTATGATATACGC
AATTTCTCGGAGTGCACGAGCAGCGTGTTTGATCGTGTCGCGCTGTTTAC
ATTCAACTACTCTTGCTGTGCGTGCTGAAGACTTTTATTGTGAACTGCTG
TGTTTCCAGGCGACAGATGCATAAGATGTACGCACCCCCATTGCCATTCT
CAGTTTTGCAAAACGTAATGTGGGACCCGAGACAGCAAGTCTGTCTGTAA
TCTGGAAGTACGAGCAACATCTTGAGTCAGGGACGCGGCGGCGTAATCAA
TGAACAGAACATTCCACATCAGCCTCACTGCACAGCAGCAGGATTTTGAA
CCCATGGCTTCAATAGTGAATGACTAAATCGGATATGGGGTGGGATGCGT
TCTGTGTGACCGCGGGTCGCCACCACGTTTAGAGCGCAAAGAAGAGAATA
TGGTCTTATTGCCGTGGAAACGGACGGAGGATGGTAACTTAAATCTGTGC
TACTCGTATCGTACCGCTTTTGCTACGCACAGCAGTCCTTTTTTATGGCT
TGACGTCTTGATCGCCTTTTCATCTCATGTTGGCCTACAGGACATCATGC
TCATCATGCACGGCATGAAAGTACACAAATAAATGCTCTAAAAATTTTAT
TGTCGAAAGAACCGCACACCGAACAGGGGCGTGGACTCCCCAATACTTCG
AAGTATTACTACCTGAACGAGCACAAAAGCTAAAGCTTGCATAAAAACAG
GTTCCTGCCCATCTGACGTCCACTATCGATCGGATGTATTTCGCAAAGCA
TCATGTACAATAGGTGTAGCAGACCGTGCAGTGTGCACGGTGGGTGTGCG
GGTGTGTTCGTGTTTTGCCTCCCATGTACTTGTGTTCTTGACGCCAGTCT
TCTCCTTTCGGGATATGCGGGCGCACCAGCCGGTGTCACTCAGGAGGAAG
GTCACACAGACAGCCCTTTTTTATTCTTTTCGTGAGTAGGCGAAATTATG
TCAAAACGAAGGTGTGCGTGGAGATGTGACATGTTTTGGACGGGAGTGTC
GACGAGCATTTGTTTTCAATTTAGAACCACAAGACGAGCAACACCACTCG
ATTATCATCTGATTGTTCTCGGGGCTTGAACAGCAAAAAAGCCTGCCGAG
TCCCGTCTCAGGGTAGTCCGTCTCAGGGGGCGTGCTTTTCTTTGATGTAC
TTCGAGAGTGATTTTTCGTAAATGTAGGACTCGGGTTCAAGCGGCAAAAG
AACCACTCTTCTTGTCGGCGATGACCATACAAGCAGCGGGAACATGTTGA
ACGAAGTGCAGCGCCGGCGAATATTAACTTGAAACTCTTGATTGTAGCAG
AAAGTAACGATTCTGGTTGCTTATGGTTGTATGTATATACCTGGTATATG
ATATGGGACCAGCAAAATCATCAACGTACCATTGTGGCTCCGCAACGGTC
AAACGTGCTGATGATATTTAATTGTGTCACTTGACGGATAGTCACCCACG
TTTTTGGCGAAATAATTAGTCGAATACCAGTAGTCCGCAACGTTTCGCAC
CCCCGCCTGCGGAAATTACATAAAGTTGTACCA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig209:54054..64686- >mRNA_P-littoralis_Contig209.7.1 ID=mRNA_P-littoralis_Contig209.7.1|Name=mRNA_P-littoralis_Contig209.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2457bp|location=Sequence derived from alignment at P-littoralis_Contig209:54054..64686- (Pylaiella littoralis U1_48)
ATGTGGCCTCTTGTTCAAACAGCACTGCTGCTGATGCAGTTACACTACTG
TTGTTCCAGTAACAACATGCTCCGTCATCACGTCGCTGCTGCCCTGGAGC
CGGCGCTGCCGCAAACGCTACAACAAGCTAGTCACGGTCTGATGACGTTC
TTGCAGCCAAATGCCCTTGCGAGTCGTGCTGCTTCTTTCCAGCTCGCTCG
GGGGAGGGTAGCCACGCGGTCAGCCGCGCCCAAGAGGCCCCTCTCGGGAG
AGGAGGTAGCAGCGGGACGACCGATGAGGGAGGGATCCAGGTTTTCCACA
AGCTCCGTGGGCGTTTTGAATGCTGACGGTGGGGCAAGCGATCGGCTGGC
TACGACGACAGCGGTAGACAACGCCCAACACCACCCACAACCGGCGCGCG
TCTCGCCGCGGCCACCATCGTCGTCCTTTCCAGCAATACCGACGTTGAAG
GTGCAGACGGGGACCCAAGTCGGGGGTGGCGACGCGTTGGGATCGGAGCC
GCAGCACCTAGAACCACAAGCCCTCGCTTCTTCGATAACCAGAGTTCACG
CCGTCGGAGGTGATTTCTCCACCGGCGAAAAGGAAAAAGAAACAAATCGC
TCGGCGACTCTGACGGGAAGCGACCGGCGGCCGTGGCGGGAAACGGTGGA
GGACGCTTCAACAATCACTACGCGGCAGAACGGTGACGAATTTGGGCAGC
GTGGGGTGGAGGCAGAAGCAGCAGCAGCAGCAGGAAGCGCTGCTTTTTCT
ACCGCAGAGGAGGACGGGGGCGGGGAGTGGTGTCCTGTTGCGGCAAGGGC
TAGCGCGTGCGAGGCCGTTCCTCAACTGACCCAGGCCTTTCGGAGTTTCG
ACGAGAAACATCCCGGTGCCACCATCATCTACCTCGCGCACTCGGGGTCC
CGCCTGTATGGCACCAGCACGCCGAAATCGGACATCGACGTCAAGGGAAT
TTTCATCCCGGACGTGCGCATGGAGCAGGGAGCTCGCCGGGCGGCCAAAG
AGGCCGCGGAAGCTGGGGCTGAGCTCGAGGAAATCGAAGAAGGGGTCACT
GTCACTGTCACTGTCGCTGCCGCTGCCGCTGCCGCTGCCGCCGCCGCCGC
CGGGGATGTGATCGAGGGACCGAGTGCTGTCGCTCCGGCCCCTCCTTCCG
GCCCACCACCCTTTACCGCGAGCAGCGGCAAATCGGAGGAGGGTGAGGAC
GTCACGTTCTGGTACTCGACCGGAGACACCACTTCCACGAACACGATGGA
CGACATCGACGTGGAGCTCATTAGCCTCGTCAGATTCTTCGGCCAACTGC
GCCGGGCAGAGGTCGGGGGCGTGGAGACCCTCCACTCCATGCTGGTCGAA
GACATCGCCCTCATCACGGACCCAGAGATCGTGCCGCTCATCCTGAGAGA
GCGGCGCTGGATGGTGTCGAAGCAGCTGACGAGCTGGGTCGGGCTTATCC
TCAGCCACCTCAACAAGTACAGGAAGGTCAACCACAAGTCAAACGTGGCT
CGGGAGAAGGCCCAGAAGAGGAAGCGCGAGCTCAACATGGCCGCCCTGCG
CAAGGCCAGAGATTCCGCGCCTTCGGTTCCGATTCCTGTTCCTGTTCCTG
TTCCTGTTCCTGTTCCGGCTTCGGCATCGGCGTCAACGTCAAGGTCGACG
CCAACGTCAATGTCAACGTCGACAGGAGCGACACCTTCTTTTTCAAACAC
GAATTCGATAGCGGCTTCGACCGGCGACGGGGAGAATACCTCGAGCCTGC
GAGAAGAAGTGGGACAGGAGAGCAAGCTCTTGGGTGATACGTCCAGCAGT
AAGGCGGGGCCTCAAGGTGACGCGGTTCCTCGGGGGGCCCGAAAGTTGGG
GGTTTCATCTAGAGGGGGTGGTGCGCCGGGTGTAGCAGGTTCTTCTCGGG
AGGTCCGAAGGCTGGGCGTTTTAACTCGGGGGGGGGGTGCGGAGGTCGCG
GCGGGGGTAGAAAACGGCGTTTTCTCTGTGGAGCCTCGACGATTAGGCGT
CCTGTCCAGAGGGGGTGTGAAGGTGGTTAATGGCGAGGCGGGCGACAACA
CCGAGACGGGCGAGGAGGAGGAGGAGGAGGAGGAGGAATTAGAAGAGCAG
GACGAGAGGAAAGAGGAGGTGATAGAGTTAGCGAGGAGAGTTAGGCGCGG
GAAGCTGCTGCTGCACGCCAGGAGAGGGGTGATGGAGGCCAAGGAGCTGC
TGACCACGGGCAGGATCGTGTTTCCGTTGAGACCGCAATACGTCAAGGAG
CTCTTGCGCTTGAAGGAGTTGGACTTTCACCCGAGGAAGATTAGTATCAT
CCAAGCGCAAGCTAAGAGGCTTTCCGACATCGCTGCCACCTCCGCACTGC
CCCTCGACGTCAGCCATGACAAGCTGGCGGCGGTAGAAGACGAGGTGATG
GAGTTGCACACCCGCCGAAGACATCGACGGCTCTCCATCCTGGAGGCTTT
AGAATAG back to top
|