prot_P-littoralis_Contig207.24.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig207.24.2
Unique Nameprot_P-littoralis_Contig207.24.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length544
Homology
BLAST of mRNA_P-littoralis_Contig207.24.2 vs. uniprot
Match: A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 2.610e-120
Identity = 236/377 (62.60%), Postives = 265/377 (70.29%), Query Frame = 0
Query:    4 HLVKIKLNGDLRIIEIPTPPRFDALVSAVVAAYGVPAGSE--LTFTYMDTDGDEVRFDTNAELDLAFRTSSVPLRIMVQRSRSGSIASSTATGR-NPQASAAAPVAASSASIPSTPGYAVGSNVGSVLGDEDA-DMIVVDLPRETVTADPLGRIMDGGSIDGXXXXXXXXXXXXESEVDAQKVEDIDAPSAFEAEAAAARDPEGSVLYQKASMRLARRFKVHLTPTQLWRVMALFQIQGRQLVIFGLAPHKALDTTADPSSAVSGASSDEDGGATSTRG-GGLKRSKSCVARSMVGDPVQSLLALNGVELPEEEVQPLLEALRVRPRRLVRLKLLPPELLEGMPDGHH--DGKSSRGGPSGHPMHGPSGRGFGRFVG 373
            HLVKIKL+GDLRI+EIP PPRFD LV  V+ AY +PAG E  LTFTY D DGDEVRFDTNAELDLA RTSSVPLRIMV            +    NP+A++AAP      SIPSTPGYAV SNVGS +G  D  DMI+VD+P E   A        GGS+DG             S+ D  + E I+  +AFEAEAAAARDPEGS+LYQKASMRLA+RFKVHLTPTQLWRVMALFQIQGRQLV+FGLAPH++LD  A  +S +   SSDE+GG        GLKRSKS VA ++V D VQ LL LNGVELPE+EVQPLL+ALRVR RRLVRL LL PE LE MPDGH+  D K  RGGP GHPMHG      GRF G
Sbjct:    3 HLVKIKLDGDLRIMEIPNPPRFDELVKTVMDAYSMPAGVEQQLTFTYKDNDGDEVRFDTNAELDLAIRTSSVPLRIMVANPPXXXXXXXXSRSTPNPEATSAAPP-----SIPSTPGYAVASNVGSAVGGGDEPDMIMVDMPGEAAAA---AAGPSGGSVDG-------------SQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKASMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDAAAAAASDLD--SSDEEGGENKPSAVRGLKRSKSQVAGTIVADHVQRLLGLNGVELPEDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDAKGPRGGPPGHPMHGHGHGPGGRFAG 356          
BLAST of mRNA_P-littoralis_Contig207.24.2 vs. uniprot
Match: D8LFK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK7_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 4.310e-107
Identity = 220/354 (62.15%), Postives = 248/354 (70.06%), Query Frame = 0
Query:   35 AYGVPAGSE--LTFTYMDTDGDEVRFDTNAELDLAFRTSSVPLRIMVQRSRSGSIASSTATGR-----NPQASAAAPVAASSASIPSTPGYAVGSNVGSVLGD-EDADMIVVDLPRETVTADPLGRIMDGGSIDGXXXXXXXXXXXXESEVDAQKVEDIDAPSAFEAEAAAARDPEGSVLYQKASMRLARRFKVHLTPTQLWRVMALFQIQGRQLVIFGLAPHKALDTTADPSSAVSGA-SSDEDGGATSTRG-GGLKRSKSCVARSMVGDPVQSLLALNGVELPEEEVQPLLEALRVRPRRLVRLKLLPPELLEGMPDGHH--DGKSSRGGPSGHPMHGPSGRGFGRFVGGRG 376
            AY +PAG E  LTFTY D +GDEVRFDTNAELDLA RTSSVPLRIMV                     NP+A++AAP      SIPSTPGYAV SNVGSV+G  +DADMI+VD+P E   A   G    GGS+DG             S+ D  + E I+  +AFEAEAAAARDPEGS+LYQK+SMRLA+RFKVHLTPTQLWRVMALFQIQGRQLV+FGLAPH++LD +A  S+A S   SSDE+GG        GLKRSKS VAR++V D VQ LL LNGVELP +EVQPLL+ALRVR RRLVRL LL PE LE MPDGH+  DGK  RGGP GHPMHG      GRF GGRG
Sbjct:    3 AYSLPAGVEKQLTFTYKDNEGDEVRFDTNAELDLALRTSSVPLRIMVANPXXXXXXXXXXXXXXRSTPNPEATSAAPP-----SIPSTPGYAVASNVGSVVGGGDDADMIMVDMPGEAAAAAAAGP--SGGSVDG-------------SQADGPEKEAINPQAAFEAEAAAARDPEGSLLYQKSSMRLAKRFKVHLTPTQLWRVMALFQIQGRQLVVFGLAPHRSLDASA--SAAASDVDSSDEEGGENKPSAVRGLKRSKSQVARTIVADHVQRLLILNGVELPGDEVQPLLQALRVRSRRLVRLGLLGPEFLEDMPDGHYHRDGKGPRGGPPGHPMHGHXXXPGGRF-GGRG 333          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig207.24.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTZ0_9PHAE2.610e-12062.60PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LFK7_ECTSI4.310e-10762.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainSMARTSM00666PB1_newcoord: 3..82
e-value: 3.4E-8
score: 43.2
IPR000270PB1 domainPFAMPF00564PB1coord: 4..81
e-value: 1.7E-7
score: 31.0
IPR000270PB1 domainPROSITEPS51745PB1coord: 3..82
score: 15.123356
NoneNo IPR availableGENE3D3.10.20.90coord: 2..82
e-value: 2.8E-10
score: 41.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..273
NoneNo IPR availableCDDcd05992PB1coord: 6..80
e-value: 1.46159E-9
score: 52.6653
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 5..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig207contigP-littoralis_Contig207:148497..152586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig207.24.2mRNA_P-littoralis_Contig207.24.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig207 148497..152688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig207.24.2 ID=prot_P-littoralis_Contig207.24.2|Name=mRNA_P-littoralis_Contig207.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=544bp
MATHLVKIKLNGDLRIIEIPTPPRFDALVSAVVAAYGVPAGSELTFTYMD
TDGDEVRFDTNAELDLAFRTSSVPLRIMVQRSRSGSIASSTATGRNPQAS
AAAPVAASSASIPSTPGYAVGSNVGSVLGDEDADMIVVDLPRETVTADPL
GRIMDGGSIDGGGSIGGVGNVLGESEVDAQKVEDIDAPSAFEAEAAAARD
PEGSVLYQKASMRLARRFKVHLTPTQLWRVMALFQIQGRQLVIFGLAPHK
ALDTTADPSSAVSGASSDEDGGATSTRGGGLKRSKSCVARSMVGDPVQSL
LALNGVELPEEEVQPLLEALRVRPRRLVRLKLLPPELLEGMPDGHHDGKS
SRGGPSGHPMHGPSGRGFGRFVGGRGRRGRGGPMHFHPPPPFQNHHHRGP
FSRSHGGPEGGHHPPRNGPPPHMMGMGGPHMEPPPGHNHRGHPHQPPAEH
THGESPREDGGGGADGRGPRGRHDPPPHHPHHPHHPHHPHHPHLHHQSMW
QHGGPGYFSSGGYGGPTGPPGGGYGYSYGGAGGGSGGWGGWAGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom