prot_P-littoralis_Contig205.59.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A6H5KC34_9PHAE (TFIIF_beta domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC34_9PHAE) HSP 1 Score: 506 bits (1303), Expect = 1.100e-179 Identity = 257/282 (91.13%), Postives = 272/282 (96.45%), Query Frame = 0
Query: 1 MAWRREQELERVGIDEPEAPRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFKTSGE 282
M+WRREQELERVGIDEPEAPRKVPKNEVSLD AND CWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGS+VEEQTMQVKPGG+VTHFKGGAKAKLGDYWLSTERNIED++AFTRPK+GTTG+TAIVSTIKRQYLMQPEVG AYTKVVKTRLVANTIKARTTEPVAMSEV+KAARDNM RKGTAFD+AFHAAQQAKLEAKGEGNKGSREKLE ELRSRLF LFAKK+VYMLKELN+ELQQ+EK+LR+ L EIARMHTSGPHRN WELKPEFKT+GE
Sbjct: 1 MSWRREQELERVGIDEPEAPRKVPKNEVSLDRANDACWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSIVEEQTMQVKPGGMVTHFKGGAKAKLGDYWLSTERNIEDSLAFTRPKSGTTGTTAIVSTIKRQYLMQPEVGSAYTKVVKTRLVANTIKARTTEPVAMSEVHKAARDNMNRKGTAFDAAFHAAQQAKLEAKGEGNKGSREKLEPGELRSRLFKLFAKKNVYMLKELNRELQQAEKHLRDGLMEIARMHTSGPHRNYWELKPEFKTAGE 282
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: D7FLP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLP8_ECTSI) HSP 1 Score: 373 bits (958), Expect = 1.410e-128 Identity = 185/199 (92.96%), Postives = 194/199 (97.49%), Query Frame = 0
Query: 1 MAWRREQELERVGIDEPEAPRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQ 199
M+WRREQELERVGIDEPEAPRKVPKNEVSLD AND CWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGS+VEEQTMQVKPGG+VTHFKGGAKAKLGDYWLSTERNIED++AFTRPK+G TG+TAIVSTIKRQYLMQPEVG AYTKVVKTRLVANTIKARTTEPVAMSEV+KAARDNM RKGTAFD+AFHAAQQ
Sbjct: 1 MSWRREQELERVGIDEPEAPRKVPKNEVSLDRANDACWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSIVEEQTMQVKPGGMVTHFKGGAKAKLGDYWLSTERNIEDSLAFTRPKSGATGTTAIVSTIKRQYLMQPEVGSAYTKVVKTRLVANTIKARTTEPVAMSEVHKAARDNMNRKGTAFDAAFHAAQQ 199
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A835YI82_9STRA (Transcription initiation factor IIF, beta subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI82_9STRA) HSP 1 Score: 131 bits (329), Expect = 2.420e-32 Identity = 93/284 (32.75%), Postives = 140/284 (49.30%), Query Frame = 0
Query: 13 GIDEPEAPRKVPKNEVSLDNANDP-------CWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTT--GSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLE--------AKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFKT 279
G +E RKV + + L N WLVK P+V+ AWE ++EG LG LVVK E ++V+ G+ T GG K L DY L R + D + F++ G G ++ +T+ R Y MQP G +Y K+++ R+VA T+K + V R + + FD A ++ + + GE G + K + LR RLF +F +++ + KELN L Q + +L+ +L+EI+ MH SGPHRN +ELK E+KT
Sbjct: 34 GCEEELGDRKVQRTMLDLSNITGEGGSVGRQMWLVKVPPAVYNAWEHVDEGGDLGRLVVKR--------DAAGEDVLEVQMAGITTQVSGGKKVGLPDYTLKGMRQVTDGLVFSQSAAGLRRGGGASMDATVVRSYNMQPISGQSYQKLMQNRMVAATVKQ---DYVRRLGDLPQKRPDGQHERHIFDVAVEEDKRRRADHIGAAVGMGGGESMGGKKIKTDRGVLRGRLFEMFGQQERWAFKELNAHLNQPDDHLKGVLREISEMHRSGPHRNQYELKAEYKT 306
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A7S4D8I2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8I2_HETAK) HSP 1 Score: 83.2 bits (204), Expect = 7.650e-15 Identity = 78/269 (29.00%), Postives = 128/269 (47.58%), Query Frame = 0
Query: 18 EAPRKVPKNEVS-LDNA--NDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGE---GNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFKTS 280
E +K+ K+ V LD++ + WLVK V + W+ +G LG L +K V +GS E ++++ L T + G L+ N ++ A+ T+ R + ++P AY K+ ++RL+ RT +P+ SE+ K G +S F + + K + +K + +LE ELRS LF F +K+ + L ELN+ELQQ E++L ++LQEI P R WELKPE++++
Sbjct: 22 EVVKKLTKDVVKPLDSSKTSKQLWLVKIPAPVAEQWDTARDGELLGSLTLKKV-----EGSNKPEFSIEM--NNLPTKYSLEQMPDAGSKMLAFSHNDDEV--------------AVDGTVTRAFSLRPLRDAAYHKMCRSRLIKALKPKRTIKPLDDSELRKPG------VGAGVNSMFDFSGKGKKRNSADFFGDHKPKKIRLEKAELRSLLFARFGEKEAWTLGELNQELQQPERHLGDLLQEIC----VKPRRGLWELKPEYRST 259
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A553PLN7_TIGCA (General transcription factor IIF subunit 2 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PLN7_TIGCA) HSP 1 Score: 66.6 bits (161), Expect = 6.840e-9 Identity = 78/278 (28.06%), Postives = 114/278 (41.01%), Query Frame = 0
Query: 22 KVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKP------DGSVVEEQTMQVKPGGLVTHFKGGAKA--KLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKART-TEPVAMS---EVYKAARDNMTRKGTAFDSAF--------HAAQQAK-LEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
K +V L NA WLV + WE E + +G+L + P D SV+ + V GG + KG K K + ++T + AV G+ T T +GP K+ V + R + MS E Y A + TR+ D A HA A L+ K EG K +K +++ LF LF K Y +K+L KE +Q YL+E+L+E+ + PH+N WELKPE++
Sbjct: 28 KKSDKDVDLVNACRGVWLVNVPKYIADRWENCPENSNVGKLKIARRTNATPVVSFSLDDSVIAATPVGVAKGGPSSMSKGSQKEIPKEHKFVVNTLNSQTLAVLSHSSAAGSEALTGPGGT---------PIGPVLDKLAVEGKVVQRAECRPINNHIYMSLKKEAYLKAIEP-TRQTKHLDKAVMAYKPKANHAVNIANDLKKKSEGKKSRDDK---EKVMETLFALFEKHQYYNIKDLVKETRQPVTYLKEILKEVCNYNLKNPHKNMWELKPEYR 292
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: UPI00193AB054 (general transcription factor IIF subunit 2-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193AB054) HSP 1 Score: 61.2 bits (147), Expect = 2.930e-7 Identity = 69/267 (25.84%), Postives = 114/267 (42.70%), Query Frame = 0
Query: 19 APRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVV-KTVKRKKPDGSVVEEQTMQ--VKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGST--AIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPV--AMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
A ++ E+ A WLVK + W+ G +G+L + KT+ R + ++ E + + T K + L N AV P G GS AI I ++ P+ G Y K+ T+ V T RT + + A+ VYK A + +A+G+ +GS+E ++ ++LF F K Y +++L K +Q +L+E+L+EI + PH+N WELKPE++
Sbjct: 2 ADKEEDNAELDCTGAKHSVWLVKVPKYLATIWKEAPGGQPVGKLRIGKTMGRTQVSFNLDESLAKEHPTSKDSVPTEHK---------FSLQGMGNQSLAVFSQIPGVGPGGSEKRAIEGRIVQKADCMPQGGQKYMKLKMTQFVVATKPTRTVKQLDTAVRSVYKPVSRIQE----------EIANDKRQKAEGKRIRGSKE-----QVMAKLFEAFEKHQFYSIQDLGKITKQPITFLKEILREIGHYNLKNPHKNMWELKPEYR 244
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: A0A6P8IEZ1_ACTTE (General transcription factor IIF subunit 2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IEZ1_ACTTE) HSP 1 Score: 61.2 bits (147), Expect = 3.070e-7 Identity = 63/263 (23.95%), Postives = 114/263 (43.35%), Query Frame = 0
Query: 26 NEVSLDNANDPCWLVKCTPSVWKAW-EGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKL-GDYWLSTERNIEDAVAFTRPKTGTT-----GSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEA---KGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
NEV + WLVK + +W E ++ +G L + +K E T + L + G K K+ DY L + + V F++ TG+ A +++ + + + + P ++ L +I + +P+ ++ K T S++ K+ K + +G R ++ DE++++LF F + Y LK+L Q YL+ +L+EIA +T PH+N WELKPE++
Sbjct: 6 NEVDCTGLSRDVWLVKVPKHLSTSWMENTDKSGIVGSLRISKNTQK-------NEITFNLSES-LASGSDGNEKPKIPSDYKLLMSKVDQSLVVFSQGPTGSADEPDESEPADKVSLEGKVVQRADFRPVHSNAEYLSLKRQSILTAS-KPMRQAKQLK----------TVVTSSYKPVSDHKMNIDYDKKKKEEGKRARIAEDEVKAKLFHAFGQHQYYNLKDLVNITNQPIIYLKSILKEIAHYNTKNPHKNMWELKPEYR 249
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: C1BZX1_CALCM (General transcription factor IIF subunit 2 n=5 Tax=Caligidae TaxID=72034 RepID=C1BZX1_CALCM) HSP 1 Score: 60.8 bits (146), Expect = 4.670e-7 Identity = 68/267 (25.47%), Postives = 110/267 (41.20%), Query Frame = 0
Query: 20 PRKVPKNEVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRKKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAF--------HAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
P K+ ++ +N WLVK + WE + +G+L + R KPD S + +V +G ++K ST + I F + + S + P+ +VVK + I +T V + KA TR+ D A HAA K E K SR+ + +++ RLF LF K Y +K+L +E +Q +L+E+L+ + + PH+N WELKPE++
Sbjct: 5 PAKISDKDLFTENRKRGVWLVKVPKYISDRWEKAPDNEVVGKLRIVKRARAKPDVSFSLDDK-------IVAKREGTPESK-----TSTNQAIPKQHKFIVSNV-MAQTLGVFSRLTSSASEGPDRVSLEGRVVK-KAECRPISDKTYMSVKREAILKAIEP--TRQTVQLDRAVNHYKPISNHAANIEHARRKKEEGKKSRD--DKEKVMERLFALFEKHQYYNIKDLVRETRQPITHLKEVLKGVCNYNLKNPHKNMWELKPEYR 253
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: UPI000644FC6C (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644FC6C) HSP 1 Score: 60.5 bits (145), Expect = 4.770e-7 Identity = 62/258 (24.03%), Postives = 111/258 (43.02%), Query Frame = 0
Query: 27 EVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKR-----KKPDGSVVEEQTMQVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVAFTRPKTGTTGSTAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVA-MSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
E++ D + WL+K + W G+++G+L K+ + G EE + P K + +E + E+A+AF GS + ++ L Q Y ++++ R K R +P+ S V K N K + ++ ++ E K RE+++ D+L +F F +K + LK+L +Q + +L+++L++I H G HRNC+E+KPEFK
Sbjct: 12 EINTDQVDQQAWLIKIPKYLADHWMNAGGGSEIGKLYFKSANDLSLSIARASGGSSEEFQLTTTPLNEANPLK-----------IFSE-DSENALAFD-------GSIGLRCDVQMDILSQ-----TYRELMQKRNTMANTKTRQLKPLQDQSSVVKMMHQNS--KPQISTAIYNKDKKKSQEEK-------RERMQEDDLTDLIFKAFEEKSYWTLKDLLVYTEQPQVWLKQVLEKICDFHKKGSHRNCYEVKPEFK 236
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Match: UPI001EB02A8D (general transcription factor IIF subunit 2-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB02A8D) HSP 1 Score: 59.7 bits (143), Expect = 1.040e-6 Identity = 68/266 (25.56%), Postives = 118/266 (44.36%), Query Frame = 0
Query: 27 EVSLDNANDPCWLVKCTPSVWKAWEGLEEGAKLGELVVKTVKRK--KPDGSVVEEQTM-QVKPGGLVTHFKGGAKAKLGDYWLSTERNIEDAVA------FTRPKTGTTGS-----TAIVSTIKRQYLMQPEVGPAYTKVVKTRLVANTIKARTTEPVAMSEVYKAARDNMTRKGTAFDSAFHAAQQAKLEAKGEGNKGSREKLEHDELRSRLFGLFAKKDVYMLKELNKELQQSEKYLREMLQEIARMHTSGPHRNCWELKPEFK 278
EV L A WLVK + + W+ + G+++G+L + K KPD +TM +V+PG A+A ++ T +++ V F + G T A+ + ++ +P Y K+ + R E + +S V ++ + +A+ S ++ K E+K R +L+ ++++ LF F K Y +K+L K Q YL+E+L+EI + PHRN WELKPE++
Sbjct: 12 EVDLSAAPRGVWLVKVPKYLSERWQKAQGGSEVGKLRITRPKSPGLKPDVMFSSHETMMKVEPGQ--------AQAPRDHKFVLTGVGVQNLVVMSQTPIFAKDGNGATKEKVAERVAVEGKVLQRAECRPIADDNYNKLKRLHWEIQNKPKR--EVIQLSGVVQSYKPR-----SAYAS-LDGDKRKKEESK-------RSRLDREKVQDMLFNAFEKHQYYNVKDLVKITNQPVPYLKEILKEICTYNMKAPHRNMWELKPEYR 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig205.59.1 ID=prot_P-littoralis_Contig205.59.1|Name=mRNA_P-littoralis_Contig205.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bpback to top |