prot_P-littoralis_Contig204.84.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: D8LK53_ECTSI (HTH La-type RNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK53_ECTSI) HSP 1 Score: 300 bits (769), Expect = 3.410e-96 Identity = 208/345 (60.29%), Postives = 234/345 (67.83%), Query Frame = 0
Query: 1 MSSSSAGNSKPPASTPVKWTLVEAVAETPEGRRSKQTQ--GQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSNVGGATFYAAQDDFGAENPNNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSEVIGTAEVEAGGTPQETKQSSVDNAGEVLDADDTKLVVSPGKESSDQEASKNEGEEVKEPAVEEKRRITSGQGQTQKGSVKPGFEFTPNAPAWTPGGVSKEVVEENT 343
MSS S+GN+KP ASTPVKWTLVEAVAETPEGRR K GQR XXXXXXXXXXXXX XXXXXXX G VGGAT+Y Q + GAE + E+QKA+MT++AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDI AGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQG+PRYIKVDPA SE E G P +T Q + +AG+V A+DT+ + KE S A K EG+ V P EE+++ +S +GQ E TP APAWTP G S + V+E +
Sbjct: 1 MSSGSSGNAKPSASTPVKWTLVEAVAETPEGRRHKHQSHAGQRKGPGARGSGYTGNWGQGRDGXXXXXXXXXXXXXNRGQRRGGGAGSRNNQGQXXXXXXXXGY-VGGATYYPTQANVGAE--SFEEQKAYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDITAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGVPRYIKVDPAV-SEADRVNGTEPSGIPAQTTQDAA-SAGDVPGAEDTQTSL---KEDSTAGAEKKEGDSVTGPVAEEEQQRSSEKGQVSHEDAAK-TELTPLAPAWTPVGASTDAVQEQS 336
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A836CAE4_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAE4_9STRA) HSP 1 Score: 138 bits (347), Expect = 9.600e-35 Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 0
Query: 127 KAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSEVIGTAEVEAGGTPQETKQSSVDNAGEVLDAD 268
K + AV+Q+E+YF+V NLC D+FMRSYMD EGYIP+AFVANFPG A G E DI + +S+ L+ D NETMR+REGW++W+LPN A+G G+PRYIK+ +++ E +A +E + N ++ D
Sbjct: 7 KKMAAEYAVKQMEWYFSVHNLCSDVFMRSYMDTEGYIPVAFVANFPGCASLGAEFTDILEALKSSEMLEFDEANETMRLREGWDMWILPN-ASGGLGVPRYIKLSEDEAAKIAAQQEAQAAAKSEEPSAEATMNGAAAVEED 147
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A7R9U3W9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3W9_9STRA) HSP 1 Score: 117 bits (294), Expect = 5.150e-26 Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 0
Query: 109 FYAAQDDFGAENPNNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPA--TNSEVIG-TAEVEAGG 248
FYAA G P + + + + AVR IE F+ +LC D F+R +MD GY+P+A VAN+ VA++G ED+ AG+ S+ LQ+D ENET+R+RE WE WL P+ G G PRY+KV P T+ + G TA+ +A G
Sbjct: 208 FYAAYGPAGVFVPASNENRTMLAASAVRAIEMTFSPNHLCTDEFLRQHMDVAGYVPVALVANYSHVAQYGALYEDLLAGLANSELLQLDAENETVRLRENWEQWLFPD-GKGGMGCPRYVKVSPVPPTDQDASGSTADGDAKG 349
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A7S1UC17_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC17_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.350e-25 Identity = 59/123 (47.97%), Postives = 79/123 (64.23%), Query Frame = 0
Query: 109 FYAA-QDDFGAENPNNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKV 230
FYAA GA P + + AVR IE F+ +LC D ++R MD EGYIP+AFVAN+P VA++G ED+ +GI +S+ L++D ENETMR+RE W+ WL P+ G G PRY+KV
Sbjct: 59 FYAAGYGGPGALVPARHENRHLFAASAVRAIEMTFSPNHLCTDEWLRQNMDVEGYIPVAFVANYPHVAQYGALYEDLLSGIASSEILELDAENETMRLRENWQQWLFPD-GKGGMGCPRYVKV 180
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: K8ZBX0_NANGC (Rna-binding la domain protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZBX0_NANGC) HSP 1 Score: 108 bits (270), Expect = 1.530e-23 Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 0
Query: 122 NNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGIL-ASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSEVIGTAEV-----EAGGTPQETKQSSVDNAG 262
N + + ++ MAV+QIE+YF+V+NLCRD ++R+++DEEG++P+A + NFP VA F + +I + AS L+ D NET+R++E WLLPN G G PR++K P T + V EAGG E + D+ G
Sbjct: 51 NALEAREYLASMAVQQIEYYFSVDNLCRDTYLRAHLDEEGWVPLALICNFPTVASFAADYSEIVKTLQEASSVLEYDEANETLRLKEKATAWLLPN-GRGGMGCPRWLKQAPDTPPQESKLPPVVLPNPEAGGEKGEVAEKKADSEG 196
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A2P4X4J6_9STRA (La domain family n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X4J6_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.320e-22 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 0
Query: 134 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKV 230
A QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F V + E + + S+T+++D +NE +R+REGW+ W+ PN A G G+PRYIKV
Sbjct: 121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETIELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKV 216
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A225VMU3_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VMU3_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.350e-22 Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 0
Query: 134 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSE 237
A QIEFYFT +NL RDIF+R +MD +G++P+AFV +F V + E + + SD++++D +NE +R+REGW+ W+ PN A G G+PRYIK++ T E
Sbjct: 121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEAMKHSDSVELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKLENETADE 223
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A484DZL2_BRELC (HTH La-type RNA-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZL2_BRELC) HSP 1 Score: 103 bits (257), Expect = 4.020e-22 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 0
Query: 134 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATN 235
A QIEFYFT +NL RDIF+R +MD EGY+P+AFV +F V + E + + S+TL++D NE +R+R GWE W+ PN G G+PRYIKV N
Sbjct: 126 AKNQIEFYFTSDNLVRDIFLRQHMDVEGYVPLAFVGSFQAVYAVHQDYESLIEAMKHSETLELDEANEKVRLRNGWEKWVWPN-IEGGYGVPRYIKVTEGEN 226
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: V9E4H7_PHYPR (HTH La-type RNA-binding domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9E4H7_PHYPR) HSP 1 Score: 103 bits (257), Expect = 4.200e-22 Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 0
Query: 134 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKV 230
A QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F V + E + + S+T+++D +NE +R+R+GWE W+ PN A G G+PRYIK+
Sbjct: 128 AKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETVELDEQNEKIRLRDGWEKWVWPN-AVGGYGVPRYIKL 223
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: H3GP14_PHYRM (HTH La-type RNA-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP14_PHYRM) HSP 1 Score: 102 bits (255), Expect = 6.580e-22 Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 0
Query: 134 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKV 230
A QIEFYFT +NL RDIF+R +MD +G++P+AFV +F V + E + + SDT+++D +NE +R+R+GW+ W+ PN A G G+PRYIK+
Sbjct: 122 AKNQIEFYFTNDNLVRDIFLRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEAMKNSDTMELDEQNEKIRLRQGWQTWVWPN-ADGGYGVPRYIKL 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig204.84.1 ID=prot_P-littoralis_Contig204.84.1|Name=mRNA_P-littoralis_Contig204.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=379bpback to top |