mRNA_P-littoralis_Contig204.84.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig204.84.1
Unique NamemRNA_P-littoralis_Contig204.84.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: D8LK53_ECTSI (HTH La-type RNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK53_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 5.920e-92
Identity = 208/345 (60.29%), Postives = 234/345 (67.83%), Query Frame = 3 
Query:   87 MSSSSAGNSKPPASTPVKWTLVEAVAETPEGRRSKQTQ--GQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSNVGGATFYAAQDDFGAENPNNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSEVIGTAEVEAGGTPQETKQSSVDNAGEVLDADDTKLVVSPGKESSDQEASKNEGEEVKEPAVEEKRRITSGQGQTQKGSVKPGFEFTPNAPAWTPGGVSKEVVEENT 1115
            MSS S+GN+KP ASTPVKWTLVEAVAETPEGRR K     GQR                    XXXXXXXXXXXXX                  XXXXXXX G  VGGAT+Y  Q + GAE  + E+QKA+MT++AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDI AGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQG+PRYIKVDPA  SE       E  G P +T Q +  +AG+V  A+DT+  +   KE S   A K EG+ V  P  EE+++ +S +GQ          E TP APAWTP G S + V+E +
Sbjct:    1 MSSGSSGNAKPSASTPVKWTLVEAVAETPEGRRHKHQSHAGQRKGPGARGSGYTGNWGQGRDGXXXXXXXXXXXXXNRGQRRGGGAGSRNNQGQXXXXXXXXGY-VGGATYYPTQANVGAE--SFEEQKAYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDITAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGVPRYIKVDPAV-SEADRVNGTEPSGIPAQTTQDAA-SAGDVPGAEDTQTSL---KEDSTAGAEKKEGDSVTGPVAEEEQQRSSEKGQVSHEDAAK-TELTPLAPAWTPVGASTDAVQEQS 336
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A836CAE4_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAE4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 5.890e-33
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 3 
Query:  465 KAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSEVIGTAEVEAGGTPQETKQSSVDNAGEVLDAD 890
            K    + AV+Q+E+YF+V NLC D+FMRSYMD EGYIP+AFVANFPG A  G E  DI   + +S+ L+ D  NETMR+REGW++W+LPN A+G  G+PRYIK+     +++    E +A    +E    +  N    ++ D
Sbjct:    7 KKMAAEYAVKQMEWYFSVHNLCSDVFMRSYMDTEGYIPVAFVANFPGCASLGAEFTDILEALKSSEMLEFDEANETMRLREGWDMWILPN-ASGGLGVPRYIKLSEDEAAKIAAQQEAQAAAKSEEPSAEATMNGAAAVEED 147
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A7R9U3W9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3W9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.000e-24
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 3 
Query:  411 FYAAQDDFGAENPNNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPA--TNSEVIG-TAEVEAGG 830
            FYAA    G   P + + +  +   AVR IE  F+  +LC D F+R +MD  GY+P+A VAN+  VA++G   ED+ AG+  S+ LQ+D ENET+R+RE WE WL P+   G  G PRY+KV P   T+ +  G TA+ +A G
Sbjct:  208 FYAAYGPAGVFVPASNENRTMLAASAVRAIEMTFSPNHLCTDEFLRQHMDVAGYVPVALVANYSHVAQYGALYEDLLAGLANSELLQLDAENETVRLRENWEQWLFPD-GKGGMGCPRYVKVSPVPPTDQDASGSTADGDAKG 349
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A7S1UC17_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC17_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.780e-24
Identity = 59/123 (47.97%), Postives = 79/123 (64.23%), Query Frame = 3 
Query:  411 FYAA-QDDFGAENPNNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKV 776
            FYAA     GA  P   + +      AVR IE  F+  +LC D ++R  MD EGYIP+AFVAN+P VA++G   ED+ +GI +S+ L++D ENETMR+RE W+ WL P+   G  G PRY+KV
Sbjct:   59 FYAAGYGGPGALVPARHENRHLFAASAVRAIEMTFSPNHLCTDEWLRQNMDVEGYIPVAFVANYPHVAQYGALYEDLLSGIASSEILELDAENETMRLRENWQQWLFPD-GKGGMGCPRYVKV 180
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: K8ZBX0_NANGC (Rna-binding la domain protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZBX0_NANGC)

HSP 1 Score: 108 bits (270), Expect = 1.610e-22
Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 3 
Query:  450 NNEKQKAHMTDMAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGIL-ASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSEVIGTAEV-----EAGGTPQETKQSSVDNAG 872
            N  + + ++  MAV+QIE+YF+V+NLCRD ++R+++DEEG++P+A + NFP VA F  +  +I   +  AS  L+ D  NET+R++E    WLLPN   G  G PR++K  P T  +      V     EAGG   E  +   D+ G
Sbjct:   51 NALEAREYLASMAVQQIEYYFSVDNLCRDTYLRAHLDEEGWVPLALICNFPTVASFAADYSEIVKTLQEASSVLEYDEANETLRLKEKATAWLLPN-GRGGMGCPRWLKQAPDTPPQESKLPPVVLPNPEAGGEKGEVAEKKADSEG 196
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A2P4X4J6_9STRA (La domain family n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X4J6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.090e-21
Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 
Query:  486 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKV 776
            A  QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F  V     + E +   +  S+T+++D +NE +R+REGW+ W+ PN A G  G+PRYIKV
Sbjct:  121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETIELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKV 216
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A225VMU3_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VMU3_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.600e-21
Identity = 48/104 (46.15%), Postives = 71/104 (68.27%), Query Frame = 3 
Query:  486 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSE 797
            A  QIEFYFT +NL RDIF+R +MD +G++P+AFV +F  V     + E +   +  SD++++D +NE +R+REGW+ W+ PN A G  G+PRYIK++  T  E
Sbjct:  121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEAMKHSDSVELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKLENETADE 223
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A484DZL2_BRELC (HTH La-type RNA-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZL2_BRELC)

HSP 1 Score: 103 bits (257), Expect = 3.140e-21
Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 3 
Query:  486 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATN 791
            A  QIEFYFT +NL RDIF+R +MD EGY+P+AFV +F  V     + E +   +  S+TL++D  NE +R+R GWE W+ PN   G  G+PRYIKV    N
Sbjct:  126 AKNQIEFYFTSDNLVRDIFLRQHMDVEGYVPLAFVGSFQAVYAVHQDYESLIEAMKHSETLELDEANEKVRLRNGWEKWVWPN-IEGGYGVPRYIKVTEGEN 226
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: V9E4H7_PHYPR (HTH La-type RNA-binding domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9E4H7_PHYPR)

HSP 1 Score: 103 bits (257), Expect = 3.290e-21
Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 3 
Query:  486 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIKV 776
            A  QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F  V     + E +   +  S+T+++D +NE +R+R+GWE W+ PN A G  G+PRYIK+
Sbjct:  128 AKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETVELDEQNEKIRLRDGWEKWVWPN-AVGGYGVPRYIKL 223
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BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Match: A0A662WMH8_9STRA (HTH La-type RNA-binding domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMH8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.770e-21
Identity = 46/96 (47.92%), Postives = 67/96 (69.79%), Query Frame = 3 
Query:  486 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGMPRYIK 773
            A  QIEFYFT +NL RDIFMR +MD +G++P+AFV +F  V     + E +   +  S+T+++D +NE +R+R+GW+ W+ PN A G  G+PRYIK
Sbjct:   35 AKNQIEFYFTSDNLVRDIFMRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEVMKHSETVELDEQNEKIRLRDGWQKWVWPN-AEGGYGVPRYIK 129
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK53_ECTSI5.920e-9260.29HTH La-type RNA-binding domain-containing protein ... [more]
A0A836CAE4_9STRA5.890e-3346.48HTH La-type RNA-binding domain-containing protein ... [more]
A0A7R9U3W9_9STRA1.000e-2444.06Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UC17_9STRA1.780e-2447.97Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K8ZBX0_NANGC1.610e-2239.46Rna-binding la domain protein (Fragment) n=2 Tax=N... [more]
A0A2P4X4J6_9STRA1.090e-2149.48La domain family n=1 Tax=Phytophthora palmivora va... [more]
A0A225VMU3_9STRA2.600e-2146.15HTH La-type RNA-binding domain-containing protein ... [more]
A0A484DZL2_BRELC3.140e-2149.02HTH La-type RNA-binding domain-containing protein ... [more]
V9E4H7_PHYPR3.290e-2148.45HTH La-type RNA-binding domain-containing protein ... [more]
A0A662WMH8_9STRA4.770e-2147.92HTH La-type RNA-binding domain-containing protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig204contigP-littoralis_Contig204:315745..321596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK53
PFAMsLa
Model size2197
Max annot lvl2759|Eukaryota
KEGG koko:K18757
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.58e-97
EggNOG OGsCOG5193@1|root,KOG2590@2759|Eukaryota
Ec32 ortholog descriptionRNA-binding protein Lupus La
Ec32 orthologEc-06_008220.1
DescriptionLa ribonucleoprotein domain family member
Cds size1137
COG categoryJO
BRITEko00000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig204.84.1prot_P-littoralis_Contig204.84.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig204 315831..320622 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789998.9034092-UTR-P-littoralis_Contig204:315744..3158301680789998.9034092-UTR-P-littoralis_Contig204:315744..315830Pylaiella littoralis U1_48UTRP-littoralis_Contig204 315745..315830 +
1680789998.9746275-UTR-P-littoralis_Contig204:320622..3215961680789998.9746275-UTR-P-littoralis_Contig204:320622..321596Pylaiella littoralis U1_48UTRP-littoralis_Contig204 320623..321596 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789998.9214072-CDS-P-littoralis_Contig204:315830..3160711680789998.9214072-CDS-P-littoralis_Contig204:315830..316071Pylaiella littoralis U1_48CDSP-littoralis_Contig204 315831..316071 +
1680789998.9321723-CDS-P-littoralis_Contig204:316122..3163611680789998.9321723-CDS-P-littoralis_Contig204:316122..316361Pylaiella littoralis U1_48CDSP-littoralis_Contig204 316123..316361 +
1680789998.9410224-CDS-P-littoralis_Contig204:317173..3172781680789998.9410224-CDS-P-littoralis_Contig204:317173..317278Pylaiella littoralis U1_48CDSP-littoralis_Contig204 317174..317278 +
1680789998.9537132-CDS-P-littoralis_Contig204:317897..3180681680789998.9537132-CDS-P-littoralis_Contig204:317897..318068Pylaiella littoralis U1_48CDSP-littoralis_Contig204 317898..318068 +
1680789998.964705-CDS-P-littoralis_Contig204:320241..3206221680789998.964705-CDS-P-littoralis_Contig204:320241..320622Pylaiella littoralis U1_48CDSP-littoralis_Contig204 320242..320622 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig204.84.1

>prot_P-littoralis_Contig204.84.1 ID=prot_P-littoralis_Contig204.84.1|Name=mRNA_P-littoralis_Contig204.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=379bp
MSSSSAGNSKPPASTPVKWTLVEAVAETPEGRRSKQTQGQRRGRGASSSG
STGSWRQPRGEGGGGGGGGGGGGGGGGRGGGGGGGRGSRNNQGRGRGYGG
GSNVGGATFYAAQDDFGAENPNNEKQKAHMTDMAVRQIEFYFTVENLCRD
IFMRSYMDEEGYIPIAFVANFPGVARFGVELEDIAAGILASDTLQVDTEN
ETMRMREGWEVWLLPNQATGKQGMPRYIKVDPATNSEVIGTAEVEAGGTP
QETKQSSVDNAGEVLDADDTKLVVSPGKESSDQEASKNEGEEVKEPAVEE
KRRITSGQGQTQKGSVKPGFEFTPNAPAWTPGGVSKEVVEENTSPIAEPP
DDKAEGTLANSSSKTIPQEGGGRAEAAV*
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mRNA from alignment at P-littoralis_Contig204:315745..321596+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig204.84.1 ID=mRNA_P-littoralis_Contig204.84.1|Name=mRNA_P-littoralis_Contig204.84.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5852bp|location=Sequence derived from alignment at P-littoralis_Contig204:315745..321596+ (Pylaiella littoralis U1_48)
GGGCGGCAGGCAGCAGCGAAGCAGACATACCGTCGGCTGGCAGAGAGTGA
TAGATCAAATCTGAATCCTTTGTTGGCAAAGCAACCATGAGCAGTAGTAG
TGCTGGGAATTCGAAACCTCCAGCGTCAACACCTGTGAAGTGGACACTCG
TCGAGGCGGTGGCAGAGACTCCAGAGGGGAGGCGTAGCAAGCAAACCCAA
GGCCAGAGGAGAGGGCGAGGAGCAAGCAGCTCTGGTTCGACAGGCAGCTG
GCGGCAACCACGAGGAGAAGGAGGGGGGGGAGGAGGAGGAGGAGGAGGCG
GGGGGGGTGGAGGGGGACGAGGTGGAGGTGGCCCGAGGAATAACCAAGCA
GGGAGAGGGAGGAGTTATGGAGGAGGAGGAGGAGGAGGAGGAAGGGGGTC
CAGGAACAACCAAGGGCGAGGACGAGGCTACGGCGGTGGGAGCAACGTAG
GGGGCGCAACGTTCTACGCGGCACAAGACGACTTTGGTGCCGAAAACCCG
AACAATGAAAAGCAAAAGGCGCACATGACCGATATGGCTGTCAGGCAGAT
TGAGTTTTACTTCACCGTGGAGAACCTGTGCCGGGACATTTTCATGAGGT
CTTACATGGATGAGGAGGTGAGGATGAAAATGATGTATCGGAAATCGAAA
AGTCGGTTTGAACATGTTTTATGATATACTCCGTACTCCGTAAGTACTTC
ATACAGAATACTTCGAAGCACAGCAGTACTCATATGATGAGAGGTGTCAT
CTCATCTCCTGCACGTGAGATGGGAAAGCAGCATAGCCGTTCGAGGCAGA
GTGGAGGACGATGCCTTATCTTGTAAGCAACCTGTTTTCTCGGCAGTAGT
TCAGCATGCGACCAGGAGGTGGGCGTTACTTTTTAACTCTCACCGCCAGA
TATAAGGGTCGTCTCATACATCCTGACTGATTTCTCATGATGACTTTACC
GCCACCCAACGCGTTCTTGCTTACGCAAGTGCCCCCAAGTCGTACGCCCC
TTCGATAGCGTACCACACCAACCTAGCATTGTGCGTTAGCTGTGGAGATT
CCGGCATACTTGTAGCAGTATTGCCTGGAAGATCAATGTGCACACAAGGA
TGGCGGTCATTTTTGCCCAGGAAGTAACCCATTGCCCGGTTTTGCAGGTT
TAATTGCGACCTCTAAAGTTCAAACACCTCAGTCGGGATAGCGTCAGCCT
ACCCAAATGTTCAAGTACTTGCCCACACCCACACACCACCTTCAAAGTTT
TCGCTCTCGTTCGTGATCGACATCTGAGGCTCGTATCCAGTCCCGATGGG
GTGATTCAGACTTTGATGAAAGAACGATGTATACCGGTATGCATCAAGTG
ACAAGAAGGCCTCCCTGACATACACAAGTTCATTCAATGCTGTATTGTTT
GCTCATGACGACGACGAATCTTCGGCCAGGGCTATATCCCGATCGCGTTT
GTCGCAAACTTTCCGGGGGTGGCGCGGTTCGGCGTGGAACTAGAAGATAT
CGCGGCGGGCATCCTGGCAAGCGACACGTTGCAGGTGTGCCCCTTGTATT
AGTGTACATCTGATTCATCATGGTCGACTACCTGGTGCCCAGGTTGGGAC
ATTCGGGCCCAGTTTTGTTTTCAACACATGCGGAGTTCAGTCTGCTGTAC
GAAAGGTATGTATTATACATACATGCGTGTTCGTGTTGTCATCCTACACA
TTCTTGAATTACAATCACCTTCCCTCATTGGCATCCGGCAGTTAAATAAA
ATCAAGTAGTTTATCTACAATCTACAACACACACGCACGTCCCGGTGGTG
CAGTTGGTAATCCACGTAACCTCCTGACATTCACGCGTGAGTTCGAATGC
AGTAACACGATCTTGGTTTTCTTCTCACAATGCGCGTGAAATTGGAAAGC
GATTAATTCGTGAGTGAACGAATTCGATCATACCATCGACGAGGGAAAGG
GGTTGCTGTCCCCTTTCTCGCGATAAAAGCTCAACCAAAACAAGGCAAGC
ACCGCATAGGGAAGTGGAAAAAATACTCCTGTGTTGATTTCCCCCTGTGT
GACCCCAGCTGGAGCGTCGACCTGCCCGAAATGTGTAAAGTGGCGTCCAA
TTAAAGGGACGACAACACACACACTCCTCAATGTACTGTACTACCGTATT
TAGGTTGATACCGAAAACGAAACGATGCGCATGCGAGAGGGCTGGGAGGT
GTGGCTTCTCCCGAACCAAGCCACTGGAAAGCAAGGGATGCCGCGGTATA
TCAAGGTGGACCCTGCAACGAATTCAGAGGTTATCGGAACTGCTGAGGTG
GAGGCTGGAGGGACTCCGCAAGAGGTAAGAGGCCTAAGAGGATGGGGGGC
ATTGTGTCGGTGCTGCCACATATGACAGTTGCTTACACAAGGGGCAGATG
TTGATGTGGACTTTTCTCCGCCCCACTCCCAACATTCAGCTCACCGCACA
CACATGATTCAGACGTTTGTTTGGCTGTGCATATCGTTTATAGTAGGACT
TCTGATATTAGCATGGTGGAAGATAAGGTTGTGGCTCATCTTATCGCACT
CTGGTGACACAGCATTACCGATTACGCACGTAATGCCGAACGTGGCGCGC
TCATCCTAGGGCGTCGAGCAACCCGTGGTGCGTTGCCTTCCCAACATGGC
CGCTGGCCGGTGGCGCTCGCTCCCCAGGCGCGCGAAAAGAATATCTGATC
ACAGTCTAGAACGCTAGAAGGAGGAGATGCCAACAGCGTGTTTCGACGCG
AACAGAGAAAAACAGACCGCCATTTAGAAAACACCTGAGGACATGACTTT
AAATACTCGCTTGATCAACCACACATCAAGCTAAAACCTCTAAGGATGCG
AACTTCAGTCACTGCCTGCCGTCGGTATGGCGTTGAATTAGCGGTGGGGT
AATTCGATCAACACGAAGTAACAACCCGGTGTATCGAACATCTGTTCGAA
AACTCATTTTCAGACGGTAGAAGCGTTGTCTATTTTAAAGAGGAAAAAAA
AGGCAAACAATCAGGGGTGTGTATCGGTGCCGACTGAACGGTTTATCGCA
CGGTACGATATTATTTATCTGTCGTCTGAGGGTTTCGCCGATGTATTGAA
ATCGATATATTTCTTGTATCGAATTGACTCATCCTTCTGCATCAGTGTGT
TTGCCCACTGCCACAGTAGCCGCGTTGTGTCCAGCTTTAGCATGAGGCGC
AGCAGGAAAGGCATAGCTGCTGCACGTACCGCGGCATTGTCTACTGGTGC
TGTTTGTTTTTGGGCAATCCGAAATCACTGGATTGGTGGCGAATACACGC
TATCAAATTCCCACTTCGAGTGTACCTTGCCTGGCGCCTTTTGGCCATCC
CAGTATTGCAGGCGCAGCCATCGTGCGTGTTGTCGACAGCAAAAAGGCAG
CTCGCAAAAAACGCGGCTCCGCCGCCTCGCTTCGCCCGGTATATTCCTAT
ACGCGAACACTTTGTACACAGTATCGATAATCGGTGCCGATACAAGACCC
TGCAAATACTGCTCCTGATCGGCAGCTCACATCATCGACCGAGGGTGCTG
CCTGTTCTTTGAATGACCCTACCGCTGACGCAAGGGCCTGACGGCAAGCA
TTGCATGACGATTCCACCTGATACATGCTCGAGCGAGGTAGTTATTGAAT
TCTCGGGTGTCGGTCAAAGACTAGGCAGTCTGGTGTTCTGTTCGTCAAGA
CATGTTATTTTCGTTTCCTTCCTCTAACCTACCAAATACTTTGACTATAA
AGTTTGTATTTCTGAAAGCGACGGCCAGCGGCTAGGTTGGCGATGTAATT
CACCTAGGGTTACACAGAGCCTCTGACGAGCGCACACCATCACGTCCGGT
ATTGAATGCAGAAGAGGTTTATCTTGGTTGTTGTTCAGGTATCGTCGAAC
CCTCTCTATAAATTAAGATTTGGAGACAAGATTCTGCAGGGCATCCCTTC
GGGGTCTATGCCCCAAAAATACCCCATTCCGATCTCCACACAACTATCGC
CAATTTTTTCCAGCCAACATTTTGCCACACCTGCAATGTACTCAACACTT
TTTTCCCATGAGTCACCCAACCCTCCCCCAAGAAAAGCGAAAGTCAACAC
ATACATCAAAATCTAGCTTCCGTTAACAACAGCCGAAGCACCAGCGTGTT
CCTTGCGCTTGGGTTTGCGAAAACAAATATCGACACATCCTCAAGTCTTT
TACGATGTATGACACAATCGGTTGCGATTGAAGAGGTATCTTGTTACGAG
GGAAGCACCAGGTCTGCTGTTGTTTGTATGTGTGCGGTCTGGTCGGTGCC
GAAATGGTGTTAGCCTGTGTCTGTGTCACAAAACACCCAGGTGTAGGCGC
TGAGTGTCGTTTTGCCCAAAGGGAAAGTCTATCTCGCGTTCGCGTCAGTC
ACTATGACTTTTTCTTTGATCACGACTAGTAAAATGAAGTTGCTCGCGCT
AACGCTGCTGCATAATTCGCGTCTGCACTTTCAATCGGGAATCGCAGACG
AAACAGAGCAGCGTGGATAACGCTGGAGAAGTACTAGACGCAGACGACAC
GAAGTTGGTTGTGTCACCGGGCAAGGAGAGCAGCGATCAAGAGGCATCGA
AAAACGAGGGCGAAGAGGTGAAAGAACCAGCCGTGGAGGAGAAACGCCGA
ATCACATCGGGGCAGGGCCAAACGCAGAAGGGCAGTGTCAAGCCGGGGTT
TGAGTTTACGCCGAACGCGCCTGCTTGGACGCCTGGCGGGGTTTCGAAAG
AGGTGGTGGAAGAAAACACGTCTCCCATCGCGGAACCTCCTGATGACAAA
GCGGAAGGCACACTTGCGAATTCTTCGTCAAAAACAATCCCACAAGAAGG
GGGGGGTAGGGCGGAGGCAGCAGTGTGACAGATACGCCAATAGTTCCGGC
TGCAGAGTTGAATCCGTGAGCGTCGCCTGCAAGATCGTCGAATCACGAAG
GCCTGTGCGCAGACCTGGGTGTTTGTGACAGCCGGCGACTTACCGATCCC
ATCTGCATTTTATCCAACTGCACTTGTGTGTCGGTATTATTGATATATTT
TGACCTCTAGATGTGTGTAGCATAGTGTCTATGGCAAGTGCGCCACGCTG
GCAACCTGTTTTTTGTGAAGATTGACATTTGTACGGTAGAGAGGTGGGCG
TGCGCGTTGGGGGTTGGGAGGAATTGGAACGTCCCGTCACAGCGATGACG
GGAGAATCGACCGGCATGTATTTTTTCGGAGCAGTCGCGAAACACGTTGG
TCCGAAGACACGATCGTGCACATTGTTGGCATCGCGTGTTTGTTGATTAG
TGAGTCTGGCTGTGACCGCGTCTTGTTGAACTGCTTTCGAGGCACGAGCT
GCCTCGCCCTTGCACGCGTAGCTGTCATCGTGAAGTAACTTGTGTGACAG
CAGAATCGACTAGCGACCTGCCGTCTCCGGCTGGGACGACGTCGAAACCA
ATTACACTTTCGGTGCGTAGTTTTTGTGTTTGAAAAGCGATGCGAACGAT
TAGGAGAAGTGCCGGATGGCTTGTGTGTCTGACAATATTGGAGTCCAGTG
GAGGTTGTTTGTCCCTTGTCAAACCGCCAAAATTGAGGTTTTCACGTCGA
TACAGCAGTTGAATTTACTCTTGCCGCTTTCGTTGGATGCACAATTATCA
CGAAAGCTGGCAACTGCGAGTTAGTTGAATTTACTCTTGCCGCTTTCGTT
GGATGCACAATTATCACGAAAGCTGGCAACTGCGAGTTAGTTCACCACAA
CAAAGTGAGGGGTTCCTGCTCCACACTAGCCAGGGGCGACCCGCCGTCGA
CACACAACATGGTCTTTGTTGCTCACAAGGCGACTTCCCGACACGGAACG
CG
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Coding sequence (CDS) from alignment at P-littoralis_Contig204:315745..321596+

>mRNA_P-littoralis_Contig204.84.1 ID=mRNA_P-littoralis_Contig204.84.1|Name=mRNA_P-littoralis_Contig204.84.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1137bp|location=Sequence derived from alignment at P-littoralis_Contig204:315745..321596+ (Pylaiella littoralis U1_48)
ATGAGCAGTAGTAGTGCTGGGAATTCGAAACCTCCAGCGTCAACACCTGT
GAAGTGGACACTCGTCGAGGCGGTGGCAGAGACTCCAGAGGGGAGGCGTA
GCAAGCAAACCCAAGGCCAGAGGAGAGGGCGAGGAGCAAGCAGCTCTGGT
TCGACAGGCAGCTGGCGGCAACCACGAGGAGAAGGAGGGGGGGGAGGAGG
AGGAGGAGGAGGCGGGGGGGGTGGAGGGGGACGAGGTGGAGGAGGAGGAG
GAGGAAGGGGGTCCAGGAACAACCAAGGGCGAGGACGAGGCTACGGCGGT
GGGAGCAACGTAGGGGGCGCAACGTTCTACGCGGCACAAGACGACTTTGG
TGCCGAAAACCCGAACAATGAAAAGCAAAAGGCGCACATGACCGATATGG
CTGTCAGGCAGATTGAGTTTTACTTCACCGTGGAGAACCTGTGCCGGGAC
ATTTTCATGAGGTCTTACATGGATGAGGAGGGCTATATCCCGATCGCGTT
TGTCGCAAACTTTCCGGGGGTGGCGCGGTTCGGCGTGGAACTAGAAGATA
TCGCGGCGGGCATCCTGGCAAGCGACACGTTGCAGGTTGATACCGAAAAC
GAAACGATGCGCATGCGAGAGGGCTGGGAGGTGTGGCTTCTCCCGAACCA
AGCCACTGGAAAGCAAGGGATGCCGCGGTATATCAAGGTGGACCCTGCAA
CGAATTCAGAGGTTATCGGAACTGCTGAGGTGGAGGCTGGAGGGACTCCG
CAAGAGACGAAACAGAGCAGCGTGGATAACGCTGGAGAAGTACTAGACGC
AGACGACACGAAGTTGGTTGTGTCACCGGGCAAGGAGAGCAGCGATCAAG
AGGCATCGAAAAACGAGGGCGAAGAGGTGAAAGAACCAGCCGTGGAGGAG
AAACGCCGAATCACATCGGGGCAGGGCCAAACGCAGAAGGGCAGTGTCAA
GCCGGGGTTTGAGTTTACGCCGAACGCGCCTGCTTGGACGCCTGGCGGGG
TTTCGAAAGAGGTGGTGGAAGAAAACACGTCTCCCATCGCGGAACCTCCT
GATGACAAAGCGGAAGGCACACTTGCGAATTCTTCGTCAAAAACAATCCC
ACAAGAAGGGGGGGGTAGGGCGGAGGCAGCAGTGTGA
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