prot_P-littoralis_Contig204.36.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig204.36.1
Unique Nameprot_P-littoralis_Contig204.36.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length166
Homology
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BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: D7FN46_ECTSI (50S ribosomal protein L5, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN46_ECTSI)

HSP 1 Score: 325 bits (832), Expect = 3.160e-112
Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIVTG 165
            MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDF+VVLNRPGYRVAKRKAK AKIGYQHKVTK DAVKWFQAKFEGIVTG
Sbjct:    9 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFFVVLNRPGYRVAKRKAKCAKIGYQHKVTKTDAVKWFQAKFEGIVTG 173
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BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A0D3AUD9_BRAOL (Uncharacterized protein n=10 Tax=Brassicaceae TaxID=3700 RepID=A0A0D3AUD9_BRAOL)

HSP 1 Score: 275 bits (702), Expect = 2.820e-92
Identity = 131/163 (80.37%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A0J8BKL6_BETVV (Uncharacterized protein n=6 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0J8BKL6_BETVV)

HSP 1 Score: 275 bits (702), Expect = 2.820e-92
Identity = 131/163 (80.37%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PVYSKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A7S2V4A8_9STRA (50S ribosomal protein L5, chloroplastic n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A8_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.330e-92
Identity = 133/163 (81.60%), Postives = 149/163 (91.41%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MR ++VDKLVLNCSVGESGDRLTRA KVLEQLTGQ+P  SKARYTVRSFGIRRNEKIACHVTVRG+KALEILERGLKVKEYEL+R+NFS TG+FGFGIQEHIDLG+KYDPSTGIYGMDF+VVL RPG RV KRKA+ +++G  H++ K DA+KWFQ KFEGIV
Sbjct:   10 MRAVQVDKLVLNCSVGESGDRLTRAIKVLEQLTGQTPCVSKARYTVRSFGIRRNEKIACHVTVRGEKALEILERGLKVKEYELRRRNFSETGNFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLRRPGNRVGKRKARQSRMGAPHRLAKDDAIKWFQQKFEGIV 172
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BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A1S4CT55_TOBAC (60S ribosomal protein L11-1-like n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4CT55_TOBAC)

HSP 1 Score: 274 bits (700), Expect = 5.500e-92
Identity = 131/163 (80.37%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
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BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A3P6F0I7_BRAOL (Uncharacterized protein n=4 Tax=Brassica TaxID=3705 RepID=A0A3P6F0I7_BRAOL)

HSP 1 Score: 273 bits (699), Expect = 5.750e-92
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRA+KVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:    1 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 163
[Close]
BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A0K9NLH5_ZOSMR (60S ribosomal protein L11a n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NLH5_ZOSMR)

HSP 1 Score: 273 bits (699), Expect = 7.550e-92
Identity = 129/163 (79.14%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRA+KVLEQL+GQSPV+SKAR+TVRSFGIRRNEKIACHVTVRG+KA++++E GLKVKEYEL RKNFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   10 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARFTVRSFGIRRNEKIACHVTVRGEKAMQLIESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRAKARVGIQHRVTKDDAMKWFQVKYEGVI 172
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BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: UPI00053C97D5 (60S ribosomal protein L11-1-like isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C97D5)

HSP 1 Score: 273 bits (698), Expect = 1.190e-91
Identity = 130/163 (79.75%), Postives = 151/163 (92.64%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQ+PV+SKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   12 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKEDAMKWFQVKYEGVI 174
[Close]
BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A394D9K8_LUPAN (Uncharacterized protein n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A394D9K8_LUPAN)

HSP 1 Score: 273 bits (697), Expect = 1.580e-91
Identity = 130/163 (79.75%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MR++KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRGDKA+++LE GLKVKEYEL R+NFS+TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRV +R+   A++G QH+VTK DA+KWFQ K+EG++
Sbjct:   11 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVI 173
[Close]
BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Match: A0A2G3C1E5_CAPCH (60S ribosomal protein L11 n=6 Tax=Spermatophyta TaxID=58024 RepID=A0A2G3C1E5_CAPCH)

HSP 1 Score: 273 bits (697), Expect = 2.000e-91
Identity = 130/163 (79.75%), Postives = 150/163 (92.02%), Query Frame = 0 
Query:    1 MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFGIRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQEHIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKIDAVKWFQAKFEGIV 163
            MRD+KV KLVLN SVGESGDRLTRAAKVLEQL+GQSPV+SKARYTVRSFGIRRNEKIAC+VTVRG+KA+++LE GLKVKEYEL R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDFYVVL RPGYRVA+R+   +++G QH+VTK DA+KWFQ K+EG++
Sbjct:   18 MRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVI 180
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN46_ECTSI3.160e-11298.1850S ribosomal protein L5, chloroplastic n=2 Tax=Ec... [more]
A0A0D3AUD9_BRAOL2.820e-9280.37Uncharacterized protein n=10 Tax=Brassicaceae TaxI... [more]
A0A0J8BKL6_BETVV2.820e-9280.37Uncharacterized protein n=6 Tax=Chenopodiaceae Tax... [more]
A0A7S2V4A8_9STRA4.330e-9281.6050S ribosomal protein L5, chloroplastic n=1 Tax=Fi... [more]
A0A1S4CT55_TOBAC5.500e-9280.3760S ribosomal protein L11-1-like n=4 Tax=Nicotiana... [more]
A0A3P6F0I7_BRAOL5.750e-9279.75Uncharacterized protein n=4 Tax=Brassica TaxID=370... [more]
A0A0K9NLH5_ZOSMR7.550e-9279.1460S ribosomal protein L11a n=1 Tax=Zostera marina ... [more]
UPI00053C97D51.190e-9179.7560S ribosomal protein L11-1-like isoform X1 n=2 Ta... [more]
A0A394D9K8_LUPAN1.580e-9179.75Uncharacterized protein n=5 Tax=Pentapetalae TaxID... [more]
A0A2G3C1E5_CAPCH2.000e-9179.7560S ribosomal protein L11 n=6 Tax=Spermatophyta Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 1..161
e-value: 6.6E-41
score: 137.7
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..163
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 1..165
e-value: 6.9E-69
score: 232.9
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 1..163
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 1..52
e-value: 3.7E-19
score: 68.8
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 56..137
e-value: 1.0E-21
score: 76.9
NoneNo IPR availablePANTHERPTHR11994:SF3160S RIBOSOMAL PROTEIN L11-1coord: 1..163
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 29..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig204contigP-littoralis_Contig204:87551..91299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig204.36.1mRNA_P-littoralis_Contig204.36.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig204 86696..91323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig204.36.1 ID=prot_P-littoralis_Contig204.36.1|Name=mRNA_P-littoralis_Contig204.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=166bp
MRDLKVDKLVLNCSVGESGDRLTRAAKVLEQLTGQSPVYSKARYTVRSFG
IRRNEKIACHVTVRGDKALEILERGLKVKEYELKRKNFSNTGSFGFGIQE
HIDLGLKYDPSTGIYGMDFYVVLNRPGYRVAKRKAKSAKIGYQHKVTKID
AVKWFQAKFEGIVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002132Ribosomal_L5
IPR022803Ribosomal_L5_dom_sf
IPR031310Ribosomal_L5_N
IPR031309Ribosomal_L5_C
IPR020929Ribosomal_L5_CS