prot_P-littoralis_Contig203.93.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig203.93.2
Unique Nameprot_P-littoralis_Contig203.93.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length144
Homology
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: D8LQX3_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQX3_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 6.160e-93
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVV RDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREIL+RIRE+EKLD
Sbjct:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVTRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILDRIREVEKLD 143          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A835YZE0_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE0_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.180e-81
Identity = 123/143 (86.01%), Postives = 139/143 (97.20%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRFLLLQNRQGKTRLSKW+IPL+DE+EK +IEN+VHRLVV+RDRKYTNF+EY +YK+IYRRYAGLFFT G+DVNDNELLALETVHLFVELL+SYFSNVCELDIVFNFNKVYNILDEFILSGEV+ES+K EIL+R+RELEKL+
Sbjct:    1 MIRFLLLQNRQGKTRLSKWYIPLYDEQEKNKIENDVHRLVVSRDRKYTNFIEYQSYKIIYRRYAGLFFTLGVDVNDNELLALETVHLFVELLDSYFSNVCELDIVFNFNKVYNILDEFILSGEVQESAKPEILDRVRELEKLE 143          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A7S2CS13_9STRA (AP complex subunit sigma n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CS13_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.310e-70
Identity = 107/143 (74.83%), Postives = 128/143 (89.51%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRF LLQNRQGKTRLSKW++    ++EK R+E E+HRLVV RDRKYT+F+E+  YKL+YRRYAGLFFT G+DVNDNELL LET+HLFVELL+ YFSNVCELDIVFNFNKVY ILDEFIL+GE++E+SK+EILERI+E+EK +
Sbjct:    4 MIRFFLLQNRQGKTRLSKWYVAPAQDREKSRLEAEIHRLVVGRDRKYTSFIEFMNYKLVYRRYAGLFFTIGIDVNDNELLYLETIHLFVELLDQYFSNVCELDIVFNFNKVYGILDEFILAGEIQETSKKEILERIKEVEKRE 146          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: F0W4M2_9STRA (AP-2 complex subunit sigma n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4M2_9STRA)

HSP 1 Score: 217 bits (553), Expect = 9.350e-70
Identity = 106/143 (74.13%), Postives = 131/143 (91.61%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRF LLQNRQGKTRLSKW++P  D++EK R+ENE+HRLVV+RD K+TNF+E+ +YKLIYRRYAGLFF  G+D++ NELL+LET+HLFVELL+  FSNVCELDIVFNFNKVY++LDE+IL GEV+E+SKRE+L+RIRELEKL+
Sbjct:   55 MIRFFLLQNRQGKTRLSKWYVPAPDDQEKFRLENEIHRLVVSRDAKHTNFIEFRSYKLIYRRYAGLFFILGVDLHANELLSLETIHLFVELLDQQFSNVCELDIVFNFNKVYSMLDEYILGGEVQETSKREMLDRIRELEKLE 197          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A024GMS7_9STRA (AP complex subunit sigma n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMS7_9STRA)

HSP 1 Score: 214 bits (545), Expect = 7.510e-69
Identity = 103/143 (72.03%), Postives = 131/143 (91.61%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRF L+QNRQGKTRLSKW++P  D++EK R+E+E+HRLV++RD K+TNF+E+ +YKLIYRRYAGLFF  G+D++ NELL+LET+HLFVELL+  FSNVCELDIVFNFNKVY++LDE+IL GEV+E+SKRE+L+RIRELEKL+
Sbjct:   33 MIRFFLMQNRQGKTRLSKWYVPAPDDQEKFRLEHEIHRLVISRDAKHTNFIEFRSYKLIYRRYAGLFFILGVDLHANELLSLETIHLFVELLDQQFSNVCELDIVFNFNKVYSMLDEYILGGEVQETSKREMLDRIRELEKLE 175          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A7S0FJC4_9STRA (AP complex subunit sigma n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJC4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.840e-68
Identity = 107/150 (71.33%), Postives = 128/150 (85.33%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHD-------EKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRF LLQNRQGKTRLSKW++P          E EK RIE+EVHRLV +RD+KYTNF+EY +YKLIYRRYAGLFFT  +D+ DNEL  LET+HLFVELL+SYFSNVCELDIVFNFN+VY ILDE+IL+GE+EE+SK+EIL+R++ LEKL+
Sbjct:    1 MIRFFLLQNRQGKTRLSKWYVPPPSSTGGGSPEAEKARIESEVHRLVTSRDKKYTNFIEYASYKLIYRRYAGLFFTIAVDITDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNRVYMILDEYILAGEIEETSKKEILDRVKVLEKLE 150          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A7S3L6S1_9STRA (AP complex subunit sigma n=2 Tax=Bacillariophycidae TaxID=33850 RepID=A0A7S3L6S1_9STRA)

HSP 1 Score: 211 bits (537), Expect = 6.020e-68
Identity = 109/153 (71.24%), Postives = 128/153 (83.66%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIP----------LHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRF LLQNRQGKTRLSKW++P           + E EKVRIE E HRLV  RD+KYTNF+EY +YKLIYRRYAGLFFT  +DV DNEL  LET+HLFVELL+SYFSNVCELDIVFNFNKVY+ILDEF+L+GE+EE+SKREIL+R++ LEK++
Sbjct:    1 MIRFFLLQNRQGKTRLSKWYVPPPTQTQSGTTANAEAEKVRIEAECHRLVTARDKKYTNFIEYNSYKLIYRRYAGLFFTIAVDVTDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNKVYSILDEFMLAGELEETSKREILDRVKMLEKME 153          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A4D9D180_9STRA (AP complex subunit sigma n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D180_9STRA)

HSP 1 Score: 211 bits (536), Expect = 7.250e-68
Identity = 105/140 (75.00%), Postives = 126/140 (90.00%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELE 140
            MIRFLLLQNRQGKTRLSKW+I   +E EK R+E +VH+L+V+RDRKYTNFVEY  YKLIYRRYAGL+F+ G+DV DNEL  LE++HLFVELL+ YF NVCELDIVFNFNKVY+ILDEFIL+GE++E+SKREILERIR+++
Sbjct:    1 MIRFLLLQNRQGKTRLSKWYILPPNEAEKFRLEADVHKLIVSRDRKYTNFVEYQNYKLIYRRYAGLYFSLGVDVTDNELAYLESIHLFVELLDEYFRNVCELDIVFNFNKVYSILDEFILAGEIQETSKREILERIRDMQ 140          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A7S2UVB6_9STRA (AP complex subunit sigma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVB6_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.240e-67
Identity = 104/143 (72.73%), Postives = 129/143 (90.21%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRFLL+QNRQGKTRLSKW+IP  +++EK R+E E++RLV++RDRKYTNF+EY ++KLIYRRYAGL+F  G+DV DNEL  LET+H  VELL+SYFSNVCELDIVF+FNKVY+ILDE+IL+GEV E++K EILER+RELEKL+
Sbjct:    1 MIRFLLMQNRQGKTRLSKWYIPSPEDQEKARMELEINRLVLSRDRKYTNFIEYHSFKLIYRRYAGLYFIMGVDVGDNELGILETIHFMVELLDSYFSNVCELDIVFHFNKVYSILDEYILAGEVMETNKNEILERVRELEKLE 143          
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Match: A0A7S2A2C1_TRICV (AP-2 complex subunit sigma n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2C1_TRICV)

HSP 1 Score: 212 bits (540), Expect = 2.400e-67
Identity = 108/152 (71.05%), Postives = 128/152 (84.21%), Query Frame = 0
Query:    1 MIRFLLLQNRQGKTRLSKWWIP---------LHDEKEKVRIENEVHRLVVNRDRKYTNFVEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVCELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD 143
            MIRF LLQNRQGKTRLSKW++P            E EK RIE++VHRLV +RD+KYTNF+EY  YKLIYRRYAGLFFT  +DVNDNEL  LET+HLFVELL+SYFSNVCELDIVFNFNKVY+ILDE++L+GE+ E+SKREILER++ LEK++
Sbjct:   77 MIRFFLLQNRQGKTRLSKWYVPPPSSPTNKDASPEAEKARIESDVHRLVTSRDKKYTNFIEYNNYKLIYRRYAGLFFTIAVDVNDNELSYLETIHLFVELLDSYFSNVCELDIVFNFNKVYSILDEYMLAGEIGETSKREILERVKVLEKVE 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.93.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQX3_ECTSI6.160e-9397.90AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YZE0_9STRA1.180e-8186.01AP complex subunit sigma n=1 Tax=Tribonema minus T... [more]
A0A7S2CS13_9STRA1.310e-7074.83AP complex subunit sigma n=1 Tax=Dictyocha speculu... [more]
F0W4M2_9STRA9.350e-7074.13AP-2 complex subunit sigma n=1 Tax=Albugo laibachi... [more]
A0A024GMS7_9STRA7.510e-6972.03AP complex subunit sigma n=1 Tax=Albugo candida Ta... [more]
A0A7S0FJC4_9STRA3.840e-6871.33AP complex subunit sigma n=1 Tax=Minutocellus poly... [more]
A0A7S3L6S1_9STRA6.020e-6871.24AP complex subunit sigma n=2 Tax=Bacillariophycida... [more]
A0A4D9D180_9STRA7.250e-6875.00AP complex subunit sigma n=1 Tax=Nannochloropsis s... [more]
A0A7S2UVB6_9STRA1.240e-6772.73AP complex subunit sigma n=1 Tax=Fibrocapsa japoni... [more]
A0A7S2A2C1_TRICV2.400e-6771.05AP-2 complex subunit sigma n=1 Tax=Trieres chinens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016635Adaptor protein complex, sigma subunitPIRSFPIRSF015588AP_complex_sigmacoord: 1..143
e-value: 5.5E-59
score: 196.3
IPR016635Adaptor protein complex, sigma subunitPANTHERPTHR11753ADAPTOR COMPLEXES SMALL SUBUNIT FAMILYcoord: 2..143
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..142
e-value: 9.0E-50
score: 168.3
NoneNo IPR availableGENE3D3.30.450.60coord: 1..143
e-value: 3.2E-56
score: 191.5
NoneNo IPR availablePANTHERPTHR11753:SF44AP-2 COMPLEX SUBUNIT SIGMAcoord: 2..143
IPR027156AP-2 complex subunit sigmaCDDcd14833AP2_sigmacoord: 1..142
e-value: 5.17479E-83
score: 238.241
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig203contigP-littoralis_Contig203:364003..369116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig203.93.2mRNA_P-littoralis_Contig203.93.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig203 363922..370432 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig203.93.2 ID=prot_P-littoralis_Contig203.93.2|Name=mRNA_P-littoralis_Contig203.93.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=144bp
MIRFLLLQNRQGKTRLSKWWIPLHDEKEKVRIENEVHRLVVNRDRKYTNF
VEYGTYKLIYRRYAGLFFTFGMDVNDNELLALETVHLFVELLESYFSNVC
ELDIVFNFNKVYNILDEFILSGEVEESSKREILERIRELEKLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016635AP_complex_ssu
IPR022775AP_mu_sigma_su
IPR027156APS2
IPR011012Longin-like_dom_sf