prot_P-littoralis_Contig203.72.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig203.72.1
Unique Nameprot_P-littoralis_Contig203.72.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length108
Homology
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BLAST of mRNA_P-littoralis_Contig203.72.1 vs. uniprot
Match: A0A6H5KUY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY0_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.010e-28
Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 0 
Query:    1 MRKTIWKNKANLGDAQLFQFVPAYYASMSVKESGTTFDDEGKGAQSVRRYEDFTAMGFLKWLDETANFTNLPSWLDKDIMGRNAFGPDILNKAKADGTKG 100
            M+ T W +K N+G A LFQF+P +YA MSVKESG  + +  + A++V+ Y+ F    FL+WL E  +FT  P+WL KDIMGRN+ GP IL +A   GT+G
Sbjct:   21 MKGTNWGDKPNVGHASLFQFLPGFYAGMSVKESGKCYSESDRNAEAVKVYKSFAVPAFLRWLVEKYDFTTTPAWLTKDIMGRNSMGPKILLEAANKGTQG 120
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.72.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KUY0_9PHAE1.010e-2850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig203contigP-littoralis_Contig203:274788..277057 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig203.72.1mRNA_P-littoralis_Contig203.72.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig203 274760..277120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig203.72.1 ID=prot_P-littoralis_Contig203.72.1|Name=mRNA_P-littoralis_Contig203.72.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=108bp
MRKTIWKNKANLGDAQLFQFVPAYYASMSVKESGTTFDDEGKGAQSVRRY
EDFTAMGFLKWLDETANFTNLPSWLDKDIMGRNAFGPDILNKAKADGTKG
FCLTNRP*
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