prot_P-littoralis_Contig202.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig202.6.1
Unique Nameprot_P-littoralis_Contig202.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length122
Homology
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BLAST of mRNA_P-littoralis_Contig202.6.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 6.840e-18
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0 
Query:   58 DNVSCVLARTIRSNLHQEVAKLIGCTGMGNQCKRGQCFARAMQMFPGKGMDRIPTEVVLALLKH 121
            DNVS VLART+R  L    A+ IG +G GNQC+RG CFARAM MF GKGM+ IP +VVLALL++
Sbjct:  160 DNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig202.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE6.840e-1864.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig202contigP-littoralis_Contig202:19897..21843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig202.6.1mRNA_P-littoralis_Contig202.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig202 19741..22007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig202.6.1 ID=prot_P-littoralis_Contig202.6.1|Name=mRNA_P-littoralis_Contig202.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp
MSRAEHPRPETLLLAAAAAAAAAASAELSSRGVPPSQESDAQGTRRAGSP
KGEGGKYDNVSCVLARTIRSNLHQEVAKLIGCTGMGNQCKRGQCFARAMQ
MFPGKGMDRIPTEVVLALLKH*
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