prot_P-littoralis_Contig202.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig202.2.1
Unique Nameprot_P-littoralis_Contig202.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length178
Homology
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BLAST of mRNA_P-littoralis_Contig202.2.1 vs. uniprot
Match: A0A6H5KAF3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAF3_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.380e-24
Identity = 58/165 (35.15%), Postives = 93/165 (56.36%), Query Frame = 0 
Query:   15 RSMELEDTFCRTVPIKVGVLSREELYGRFQRREVDAAYRAWNLLLNSVVDVAMMVRMTAEGSPSGGWSAFKNYYTPQADAEKERVRQEWYDLRQGLNEAPKQFFSRVTVLESKLCRHGIVMDERETNTHVIRRLSSLFHTQAEILLANPFA-TRMKIESVVLNKH 178
            R +EL +     +P+    +S EEL        V+    +WNLL+ SV  + ++ ++ A+GSPSGGW  F NYY P+A AEKER+  +++ L   + E P+ +F R  VL S+L  HG++  + + N H++  LS  +  + +IL  +P   +R KIE  V + H
Sbjct:   41 RDVELTE---EKIPVGKEGVSMEELPRVHSSDSVEKTITSWNLLITSVTYMPILTQIIADGSPSGGWKIFLNYYEPRARAEKERLSSQYHGLEMKVGETPQDYFGRFAVLRSRLAPHGVIFSDEDANAHMVYHLSDEYMME-KILTMSPIPRSREKIEKGVRDAH 201
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig202.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAF3_9PHAE1.380e-2435.15Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig202contigP-littoralis_Contig202:8517..9050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig202.2.1mRNA_P-littoralis_Contig202.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig202 8335..9050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig202.2.1 ID=prot_P-littoralis_Contig202.2.1|Name=mRNA_P-littoralis_Contig202.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=178bp
MSRQCSWYGLSLLFRSMELEDTFCRTVPIKVGVLSREELYGRFQRREVDA
AYRAWNLLLNSVVDVAMMVRMTAEGSPSGGWSAFKNYYTPQADAEKERVR
QEWYDLRQGLNEAPKQFFSRVTVLESKLCRHGIVMDERETNTHVIRRLSS
LFHTQAEILLANPFATRMKIESVVLNKH
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