mRNA_P-littoralis_Contig200.134.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: D7G1V5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V5_ECTSI) HSP 1 Score: 147 bits (370), Expect = 7.650e-42 Identity = 82/151 (54.30%), Postives = 101/151 (66.89%), Query Frame = 1
Query: 94 MLAAAVAVENNWAELTRPYLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 546
MLAA+ V+ + + +LK Q+N+GVGRK A+RKLAK RSQ E A+ A+ AC+ GW G+EYF V KEC GA AA T E+ +DVSHAQAGKL+ QA AL+ VY KLL G S FE A L + V T+KQWE EYR KGHI +
Sbjct: 1 MLAASQEVDKHEKDWQPAFLKRQSNRGVGRKEALRKLAKHRSQLEKASLASAACKAGWEKGLEYFRAVAKECNGAVAA-TSAGLEETIDVSHAQAGKLLTQAQALRAVYSKLLQGVSKRQAFEGSAEFLELAVGTIKQWELEYRTKGHIVL 150
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5LDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDJ5_9PHAE) HSP 1 Score: 131 bits (329), Expect = 2.150e-35 Identity = 76/137 (55.47%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 133 ELTRP-YLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHI 540
E+ RP +LK Q+N+GVGRK A+RKLAK RSQ E AA A+ ACR GW G +YF V KEC A A ++ E L VSHAQAG L L+A+ALKG+Y KLL G S FEE A V ST+++WE YR KGHI
Sbjct: 13 EVYRPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQFAVAVSSAGLNESVL-VSHAQAGSLQLKALALKGLYHKLLRGVSKRQAFEETAEFFEVASSTLREWELSYRTKGHI 148
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: D8LEU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU9_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.740e-33 Identity = 73/149 (48.99%), Postives = 94/149 (63.09%), Query Frame = 1
Query: 94 MLAAAVAVENNWAELTRPYLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHI 540
M AA V+ + + + +LK Q+N+GV R A+ KLA RSQ E AA A+ A + GW GVEYF V KEC A AA T ++ +DVSHAQAGKL+++A+AL+ VY KLL G S FE A + + T+KQWE EYR KGHI
Sbjct: 28 MFDAAREVDRHEKDWRQAFLKRQSNRGVRRTEALGKLANHRSQLEKAALASAARKAGWEKGVEYFRAVVKECQSAVAA-TSAGLDETMDVSHAQAGKLLIKALALRAVYSKLLEGVSRREAFEASAEFVEMSEGTIKQWELEYRTKGHI 175
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5JVH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH8_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.830e-31 Identity = 81/191 (42.41%), Postives = 106/191 (55.50%), Query Frame = 1
Query: 1 MRTLLHKCEAFLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRP-YLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAE--------QPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 546
+R + +L G Q A +RD+ A ++ AV + E+ RP +LK Q+N+GVGRK A+RKLAK RSQ E AA A+ ACR GW G +YF V KEC ++ + + + VSHAQAG L +A+ALKG+Y LL G S FEE A V ST ++WE YR KGHI V
Sbjct: 158 LRQAAQQLNYYLERGQLQCAQMVSRDLPGA--MSYAVKEAHQQEEVYRPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAVASAACRSGWEGGQDYFRAVIKECQSCSSHTCWTQCKRVWATRCSESVLVSHAQAGSLQFKALALKGLYHMLLRGVSKRQAFEETAEFFEVASSTPREWELSYRTKGHIQV 346
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 128 bits (322), Expect = 4.220e-31 Identity = 82/182 (45.05%), Postives = 102/182 (56.04%), Query Frame = 1
Query: 1 MRTLLHKCEAFLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRPYLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 546
+R + ++ G A A+RD+ ML A V + +LK Q+N+GVGRK A+RKLAK RSQ E AA A+ ACR GW G +YF V KEC A AA + E L VSHAQAG L +A+ALK VY KLL G FE+ A V ST+++WE YR KGHI V
Sbjct: 152 VREAAQQLNDYIERGQPHCALIASRDLPG-DMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVL-VSHAQAGSLQFKALALKAVYHKLLKGAPKRQAFEDTAEFFEVADSTLREWELSYRTKGHIQV 331
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5KAS5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS5_9PHAE) HSP 1 Score: 127 bits (319), Expect = 5.450e-31 Identity = 81/180 (45.00%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 1 MRTLLHKCEAFLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRPYLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHI 540
+R + ++ G A A+RD+ ML A V + +LK Q+N+GVGRK A+RKLAK RSQ E AA A+ ACR GW G +YF V KEC A AA + E L VSHAQAG L +A+ALK VY KLL G FE+ A V ST+++WE YR KGHI
Sbjct: 152 VREAAQQLNDYIERGQPHCALIASRDLPG-DMLDAVKEVHQHQEVWGPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAATSAGLNESVL-VSHAQAGSLQFKALALKAVYHKLLKGAPKRQAFEDTAEFFEVADSTLREWELSYRTKGHI 329
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 119 bits (297), Expect = 8.950e-28 Identity = 77/183 (42.08%), Postives = 101/183 (55.19%), Query Frame = 1
Query: 1 MRTLLHKCEAFLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRP-YLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 546
+R + +L G Q A +RD+ A + AV + + RP +LK Q+N+G+GRK A+RKLAK +SQ + A A+ ACR GW G V KEC A A + E L VSH+QAG L +A+A KG+Y KLL G S FEE A V ST+++WE YR KGHI V
Sbjct: 71 LRQAAQQLNGYLERGQLQCAQMVSRDLPGAML--DAVKEAHQQEVVYRPAFLKRQSNRGLGRKEALRKLAKHQSQLQKEAAASAACRSGWERGQGCLRAVIKECQSAIAVTSAGLNESVL-VSHSQAGSLQFKALARKGLYHKLLRGVSKRQAFEETAEFFEVASSTLREWELSYRTKGHIQV 250
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5JGM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM4_9PHAE) HSP 1 Score: 107 bits (268), Expect = 3.250e-24 Identity = 73/175 (41.71%), Postives = 93/175 (53.14%), Query Frame = 1
Query: 31 FLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRP---YLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 546
+L G Q A +RD+ A ++ AV + E+ RP +LK Q+N RK A+RKL K RSQ E AA A+ ACR GW G +YF V KEC A A + + AG L +A+ALKG+Y KLL G FEE A V ST+++WE YR KGHI V
Sbjct: 123 YLERGQLQCAQMVSRDLPGA--MSDAVKEAHQQEEVYRPAXAFLKRQSN---SRKEALRKLTKHRSQLEKAAAASAACRSGWERGQDYFRAVIKECQSAVAVTS----------AGLNAGSLQFKALALKGLYHKLLRGVPKRQAFEETAEFFQVASSTLREWELSYRTKGHIQV 282
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5K534_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K534_9PHAE) HSP 1 Score: 101 bits (251), Expect = 4.180e-22 Identity = 70/172 (40.70%), Postives = 88/172 (51.16%), Query Frame = 1
Query: 34 LRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRP-YLKSQANKGVGRKSAIRKLAKKRSQWENAATAAKACREGWSSGVEYFERVQKECLGATAAATGHDAEQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHIAV 546
L G Q A +RD+ A ++ AV + E RP +LK Q+N+G+ E AA A+ ACR GW G +YF V KEC A A + E L VSH QAG L +A+AL G+Y KLL G S FEE A V ST+++WE YR KGHI V
Sbjct: 172 LERGKLQCAQMVSRDLPGA--MSDAVKEAHQQEEACRPAFLKRQSNRGL----------------EKAAAASAACRSGWERGQDYFRVVIKECQSAVAVTSAGLNESVL-VSHTQAGSLQFKALALNGLYHKLLRGVSKRQAFEETAEFFEVAFSTLREWELSYRTKGHIQV 324
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.190e-13 Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 346 EQPLDVSHAQAGKLMLQAVALKGVYQKLLLGWSATVVFEEMAGLLAVGVSTVKQWEREYRHKGHI 540
++P+DVSHAQAGKL+ +A AL+GVY KLL G S FEE A L V V T+KQWE EYR KG I
Sbjct: 4 QEPIDVSHAQAGKLLTKAHALRGVYSKLLKGVSKRQAFEESAEFLQVSVGTIKQWELEYRTKGRI 68 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.134.1 >prot_P-littoralis_Contig200.134.1 ID=prot_P-littoralis_Contig200.134.1|Name=mRNA_P-littoralis_Contig200.134.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=182bp MRTLLHKCEAFLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRPYback to top mRNA from alignment at P-littoralis_Contig200:417642..418493+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig200.134.1 ID=mRNA_P-littoralis_Contig200.134.1|Name=mRNA_P-littoralis_Contig200.134.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=852bp|location=Sequence derived from alignment at P-littoralis_Contig200:417642..418493+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig200:417642..418493+ >mRNA_P-littoralis_Contig200.134.1 ID=mRNA_P-littoralis_Contig200.134.1|Name=mRNA_P-littoralis_Contig200.134.1|organism=Pylaiella littoralis U1_48|type=CDS|length=546bp|location=Sequence derived from alignment at P-littoralis_Contig200:417642..418493+ (Pylaiella littoralis U1_48)back to top |