mRNA_P-littoralis_Contig198.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: D8LIE6_ECTSI (Conserved protein of fucose operon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIE6_ECTSI) HSP 1 Score: 275 bits (704), Expect = 1.900e-88 Identity = 139/164 (84.76%), Postives = 148/164 (90.24%), Query Frame = 1
Query: 1 MGLIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVSEGSAAHGPAVFQL 492
MGLIGI +ISPDLLVTLARMGHGDSICFADANFPSE+L +PG+ GPIT+RADGHEVAPLLRAVSKL PLD+YTEFPVQMMAAVPGDELD SIE RF AVE EQP FKVERVERFAFYERARSCYAVV+TGETAKYGNIILVKGVLGVS+ SA GPA+F L
Sbjct: 1 MGLIGISPLISPDLLVTLARMGHGDSICFADANFPSENLTSPGKPGPITVRADGHEVAPLLRAVSKLFPLDTYTEFPVQMMAAVPGDELDASIEERFSTAVEAEQPGMFKVERVERFAFYERARSCYAVVSTGETAKYGNIILVKGVLGVSDESAGSGPAIFTL 164
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A7X1B4G5_9BACT (D-ribose pyranase n=1 Tax=Pelagicoccus albus TaxID=415222 RepID=A0A7X1B4G5_9BACT) HSP 1 Score: 157 bits (396), Expect = 9.640e-43 Identity = 87/149 (58.39%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 7 LIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVS 453
LIGI ++SP+LL L RMGHGD I ADA+FP ES G + IRADG ++A LL A+S L P D Y E P+ MM+AVPGDELDPS+E + ++ P ER+ERFAFYERARS YAVV TGETAKYGNIIL KGV V+
Sbjct: 2 LIGISPLLSPELLNALYRMGHGDEIVLADAHFPGESFN-----GNV-IRADGLKIADLLGAISPLFPFDEYVENPLGMMSAVPGDELDPSVEEGYLASIRKTYPDTKPSERIERFAFYERARSAYAVVMTGETAKYGNIILKKGVTPVA 144
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: UPI001B8F97EE (L-fucose mutarotase n=2 Tax=Carboxylicivirga TaxID=1628153 RepID=UPI001B8F97EE) HSP 1 Score: 156 bits (394), Expect = 1.900e-42 Identity = 83/146 (56.85%), Postives = 100/146 (68.49%), Query Frame = 1
Query: 13 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGV 450
GI +ISP+LL LARMGHGD I FADA+FP ESL IRADG +A LL A+ L LD+Y P+ MMA V GD+LDPS+ET + +A+ P A +ER+ERF FYERAR+ +AVV TGETAKYGNI+L KGV V
Sbjct: 4 GISPLISPELLAVLARMGHGDEIVFADAHFPGESLNAN------VIRADGLHIADLLAAILPLFELDAYVSAPIVMMAPVEGDDLDPSVETAYLEAIHQTNPHAPAIERIERFDFYERARNAFAVVMTGETAKYGNILLKKGVTPV 143
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: UPI0004789706 (L-fucose mutarotase n=1 Tax=Alkaliflexus imshenetskii TaxID=286730 RepID=UPI0004789706) HSP 1 Score: 155 bits (391), Expect = 5.390e-42 Identity = 84/143 (58.74%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 13 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 441
GI IISPDLL LARMGHGD I FADA+FP ES + +RADG + LL AV L LDSY P+ MMAAV GD LDP++E ++ +AV++ P+ V+R+ERFAFYER RS +AVV TGETAKYGNIIL KGV
Sbjct: 4 GISPIISPDLLQILARMGHGDEIVFADAHFPGESFNSR------ILRADGIRIPDLLEAVLPLFELDSYVPNPLIMMAAVEGDVLDPAVEQQYLKAVQISNPNISSVKRIERFAFYERTRSAFAVVMTGETAKYGNIILKKGV 140
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: UPI00177F087E (L-fucose mutarotase n=2 Tax=Pelagicoccus TaxID=455433 RepID=UPI00177F087E) HSP 1 Score: 155 bits (391), Expect = 5.390e-42 Identity = 85/150 (56.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 7 LIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVSE 456
LIGI I+SP+LL L RMGHGD I ADA+FP ES IRADG ++A LL + L LD Y + P+ MMAAVPGDELDPS+E + A+ P ER+ERFAFYERA+ YAVV TGETAKYGNIIL KGV VS+
Sbjct: 2 LIGISPILSPELLNALYRMGHGDEIVLADAHFPGESFNEN------VIRADGLKIAALLEGICPLFALDEYVDNPLAMMAAVPGDELDPSVENGYLAAIRQTWPETRPSERIERFAFYERAKKAYAVVMTGETAKYGNIILKKGVTPVSQ 145
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A350YV71_9BACT (D-ribose pyranase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A350YV71_9BACT) HSP 1 Score: 154 bits (390), Expect = 7.100e-42 Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 13 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVL 444
GI IISP LL LARMGHGD I ADA+FP E+ + IRADG +++ LL A+ L LDSY PV MM AVPGD+LDP++E + +++++ PS VERVERFAFY+R RS +AVV TGET KYGNIIL KGV+
Sbjct: 4 GISPIISPALLEVLARMGHGDEIVLADAHFPGETFNSR------VIRADGLKISSLLEAILPLFELDSYVPHPVAMMDAVPGDQLDPAVEETYLKSIQITHPSIHSVERVERFAFYDRTRSAFAVVMTGETTKYGNIILKKGVI 141
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A836UDM0_9BACT (D-ribose pyranase n=2 Tax=Bacteria TaxID=2 RepID=A0A836UDM0_9BACT) HSP 1 Score: 153 bits (387), Expect = 2.580e-41 Identity = 84/156 (53.85%), Postives = 100/156 (64.10%), Query Frame = 1
Query: 7 LIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVSEGSAAHG 474
L+GI ++SPDLL TL RMGHGD I ADA+FP ES+ RR +RADG VAPLL + L LD Y PV MMAAV GD LDP +ET R ++ P + R+ERFAFYERAR YA+V TG+TAKYGN+IL KGV +S G
Sbjct: 2 LVGISPLLSPDLLATLCRMGHGDEIVLADAHFPGESI---ARR---CLRADGLSVAPLLDGILPLFCLDGYVASPVTMMAAVDGDSLDPEVETACRTVIDRHWPDTAAITRLERFAFYERARDAYAIVMTGDTAKYGNVILRKGVTPLSPSVDTKG 151
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A0K8R165_9BACT (D-ribose pyranase n=1 Tax=Bacteroidales bacterium 6E TaxID=1688776 RepID=A0A0K8R165_9BACT) HSP 1 Score: 153 bits (386), Expect = 2.740e-41 Identity = 81/144 (56.25%), Postives = 99/144 (68.75%), Query Frame = 1
Query: 13 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVL 444
GI IISP LL LARMGHGD I ADA+FP E+ T IRADG ++ LL A+ +L LDSY PV MM AVPGD+LDP++E + +++++ P VERVERF FYER RS +AVV TGETAKYGN+IL KGV+
Sbjct: 4 GISPIISPALLEILARMGHGDEIVLADAHFPGETFNTR------VIRADGLKIPALLEAILQLFELDSYVPHPVAMMDAVPGDQLDPTVEQSYLKSIQLTHPKIQSVERVERFEFYERTRSAFAVVMTGETAKYGNVILKKGVI 141
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A1V5G3T7_9BACT (D-ribose pyranase n=1 Tax=candidate division BRC1 bacterium ADurb.BinA364 TaxID=1852825 RepID=A0A1V5G3T7_9BACT) HSP 1 Score: 152 bits (385), Expect = 3.840e-41 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 7 LIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 441
LIGI +I PDLL L RMGHGD I ADA+FP ESL + +RADG +APLL + L LD Y PV MMAAV GD L P +E +R A+E P +ER+ERFAFYERA++ YAVV TGETAKYGNI+L KGV
Sbjct: 2 LIGISPLIGPDLLAVLCRMGHGDEIVLADAHFPGESLNSR------VLRADGLRIAPLLDGILPLFALDEYVASPVVMMAAVEGDALAPEVEQAYRAAIERHAPRTPPIERIERFAFYERAKTAYAVVMTGETAKYGNILLKKGV 140
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A840UW31_9BACT (D-ribose pyranase n=1 Tax=Haloferula luteola TaxID=595692 RepID=A0A840UW31_9BACT) HSP 1 Score: 152 bits (385), Expect = 4.080e-41 Identity = 80/143 (55.94%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 13 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 441
GI ++SP+LL TL RMGHGD I ADA+FP E+ T T+RADG +APLL A+ LL LD+Y P+ MMAAV GD LDP +E R+R++++ P A + R+ERFAFY+RAR +AVV TGE AKYGNIIL KGV
Sbjct: 4 GISPLLSPELLATLHRMGHGDEIVLADAHFPGETFSTH------TLRADGLGIAPLLDAILPLLELDAYVPQPLLMMAAVEGDTLDPEVEKRYRESIDRHAPDAPSIARLERFAFYDRARKAFAVVMTGELAKYGNIILKKGV 140 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig198.23.1 >prot_P-littoralis_Contig198.23.1 ID=prot_P-littoralis_Contig198.23.1|Name=mRNA_P-littoralis_Contig198.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp MGLIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIback to top mRNA from alignment at P-littoralis_Contig198:117830..122700- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig198.23.1 ID=mRNA_P-littoralis_Contig198.23.1|Name=mRNA_P-littoralis_Contig198.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4871bp|location=Sequence derived from alignment at P-littoralis_Contig198:117830..122700- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig198:117830..122700- >mRNA_P-littoralis_Contig198.23.1 ID=mRNA_P-littoralis_Contig198.23.1|Name=mRNA_P-littoralis_Contig198.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=495bp|location=Sequence derived from alignment at P-littoralis_Contig198:117830..122700- (Pylaiella littoralis U1_48)back to top |