prot_P-littoralis_Contig198.23.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig198.23.1
Unique Nameprot_P-littoralis_Contig198.23.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length165
Homology
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: D8LIE6_ECTSI (Conserved protein of fucose operon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIE6_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 7.270e-93
Identity = 139/164 (84.76%), Postives = 148/164 (90.24%), Query Frame = 0
Query:    1 MGLIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVSEGSAAHGPAVFQL 164
            MGLIGI  +ISPDLLVTLARMGHGDSICFADANFPSE+L +PG+ GPIT+RADGHEVAPLLRAVSKL PLD+YTEFPVQMMAAVPGDELD SIE RF  AVE EQP  FKVERVERFAFYERARSCYAVV+TGETAKYGNIILVKGVLGVS+ SA  GPA+F L
Sbjct:    1 MGLIGISPLISPDLLVTLARMGHGDSICFADANFPSENLTSPGKPGPITVRADGHEVAPLLRAVSKLFPLDTYTEFPVQMMAAVPGDELDASIEERFSTAVEAEQPGMFKVERVERFAFYERARSCYAVVSTGETAKYGNIILVKGVLGVSDESAGSGPAIFTL 164          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A7X1B4G5_9BACT (D-ribose pyranase n=1 Tax=Pelagicoccus albus TaxID=415222 RepID=A0A7X1B4G5_9BACT)

HSP 1 Score: 156 bits (395), Expect = 3.990e-46
Identity = 87/149 (58.39%), Postives = 103/149 (69.13%), Query Frame = 0
Query:    3 LIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVS 151
            LIGI  ++SP+LL  L RMGHGD I  ADA+FP ES       G + IRADG ++A LL A+S L P D Y E P+ MM+AVPGDELDPS+E  +  ++    P     ER+ERFAFYERARS YAVV TGETAKYGNIIL KGV  V+
Sbjct:    2 LIGISPLLSPELLNALYRMGHGDEIVLADAHFPGESFN-----GNV-IRADGLKIADLLGAISPLFPFDEYVENPLGMMSAVPGDELDPSVEEGYLASIRKTYPDTKPSERIERFAFYERARSAYAVVMTGETAKYGNIILKKGVTPVA 144          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: UPI001B8F97EE (L-fucose mutarotase n=2 Tax=Carboxylicivirga TaxID=1628153 RepID=UPI001B8F97EE)

HSP 1 Score: 155 bits (393), Expect = 8.040e-46
Identity = 82/143 (57.34%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    5 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 147
            GI  +ISP+LL  LARMGHGD I FADA+FP ESL          IRADG  +A LL A+  L  LD+Y   P+ MMA V GD+LDPS+ET + +A+    P A  +ER+ERF FYERAR+ +AVV TGETAKYGNI+L KGV
Sbjct:    4 GISPLISPELLAVLARMGHGDEIVFADAHFPGESLNAN------VIRADGLHIADLLAAILPLFELDAYVSAPIVMMAPVEGDDLDPSVETAYLEAIHQTNPHAPAIERIERFDFYERARNAFAVVMTGETAKYGNILLKKGV 140          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: UPI0004789706 (L-fucose mutarotase n=1 Tax=Alkaliflexus imshenetskii TaxID=286730 RepID=UPI0004789706)

HSP 1 Score: 155 bits (391), Expect = 1.670e-45
Identity = 84/143 (58.74%), Postives = 100/143 (69.93%), Query Frame = 0
Query:    5 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 147
            GI  IISPDLL  LARMGHGD I FADA+FP ES  +        +RADG  +  LL AV  L  LDSY   P+ MMAAV GD LDP++E ++ +AV++  P+   V+R+ERFAFYER RS +AVV TGETAKYGNIIL KGV
Sbjct:    4 GISPIISPDLLQILARMGHGDEIVFADAHFPGESFNSR------ILRADGIRIPDLLEAVLPLFELDSYVPNPLIMMAAVEGDVLDPAVEQQYLKAVQISNPNISSVKRIERFAFYERTRSAFAVVMTGETAKYGNIILKKGV 140          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A350YV71_9BACT (D-ribose pyranase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A350YV71_9BACT)

HSP 1 Score: 154 bits (390), Expect = 2.220e-45
Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 0
Query:    5 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVL 148
            GI  IISP LL  LARMGHGD I  ADA+FP E+  +        IRADG +++ LL A+  L  LDSY   PV MM AVPGD+LDP++E  + +++++  PS   VERVERFAFY+R RS +AVV TGET KYGNIIL KGV+
Sbjct:    4 GISPIISPALLEVLARMGHGDEIVLADAHFPGETFNSR------VIRADGLKISSLLEAILPLFELDSYVPHPVAMMDAVPGDQLDPAVEETYLKSIQITHPSIHSVERVERFAFYDRTRSAFAVVMTGETTKYGNIILKKGVI 141          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: UPI00177F087E (L-fucose mutarotase n=2 Tax=Pelagicoccus TaxID=455433 RepID=UPI00177F087E)

HSP 1 Score: 154 bits (389), Expect = 3.350e-45
Identity = 85/150 (56.67%), Postives = 99/150 (66.00%), Query Frame = 0
Query:    3 LIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGVSE 152
            LIGI  I+SP+LL  L RMGHGD I  ADA+FP ES           IRADG ++A LL  +  L  LD Y + P+ MMAAVPGDELDPS+E  +  A+    P     ER+ERFAFYERA+  YAVV TGETAKYGNIIL KGV  VS+
Sbjct:    2 LIGISPILSPELLNALYRMGHGDEIVLADAHFPGESFNEN------VIRADGLKIAALLEGICPLFALDEYVDNPLAMMAAVPGDELDPSVENGYLAAIRQTWPETRPSERIERFAFYERAKKAYAVVMTGETAKYGNIILKKGVTPVSQ 145          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A0K8R165_9BACT (D-ribose pyranase n=1 Tax=Bacteroidales bacterium 6E TaxID=1688776 RepID=A0A0K8R165_9BACT)

HSP 1 Score: 153 bits (386), Expect = 8.990e-45
Identity = 81/144 (56.25%), Postives = 99/144 (68.75%), Query Frame = 0
Query:    5 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVL 148
            GI  IISP LL  LARMGHGD I  ADA+FP E+  T        IRADG ++  LL A+ +L  LDSY   PV MM AVPGD+LDP++E  + +++++  P    VERVERF FYER RS +AVV TGETAKYGN+IL KGV+
Sbjct:    4 GISPIISPALLEILARMGHGDEIVLADAHFPGETFNTR------VIRADGLKIPALLEAILQLFELDSYVPHPVAMMDAVPGDQLDPTVEQSYLKSIQLTHPKIQSVERVERFEFYERTRSAFAVVMTGETAKYGNVILKKGVI 141          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A1V5G3T7_9BACT (D-ribose pyranase n=1 Tax=candidate division BRC1 bacterium ADurb.BinA364 TaxID=1852825 RepID=A0A1V5G3T7_9BACT)

HSP 1 Score: 152 bits (385), Expect = 1.280e-44
Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
Query:    3 LIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 147
            LIGI  +I PDLL  L RMGHGD I  ADA+FP ESL +        +RADG  +APLL  +  L  LD Y   PV MMAAV GD L P +E  +R A+E   P    +ER+ERFAFYERA++ YAVV TGETAKYGNI+L KGV
Sbjct:    2 LIGISPLIGPDLLAVLCRMGHGDEIVLADAHFPGESLNSR------VLRADGLRIAPLLDGILPLFALDEYVASPVVMMAAVEGDALAPEVEQAYRAAIERHAPRTPPIERIERFAFYERAKTAYAVVMTGETAKYGNILLKKGV 140          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A840UW31_9BACT (D-ribose pyranase n=1 Tax=Haloferula luteola TaxID=595692 RepID=A0A840UW31_9BACT)

HSP 1 Score: 152 bits (385), Expect = 1.360e-44
Identity = 80/143 (55.94%), Postives = 100/143 (69.93%), Query Frame = 0
Query:    5 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 147
            GI  ++SP+LL TL RMGHGD I  ADA+FP E+  T       T+RADG  +APLL A+  LL LD+Y   P+ MMAAV GD LDP +E R+R++++   P A  + R+ERFAFY+RAR  +AVV TGE AKYGNIIL KGV
Sbjct:    4 GISPLLSPELLATLHRMGHGDEIVLADAHFPGETFSTH------TLRADGLGIAPLLDAILPLLELDAYVPQPLLMMAAVEGDTLDPEVEKRYRESIDRHAPDAPSIARLERFAFYDRARKAFAVVMTGELAKYGNIILKKGV 140          
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Match: A0A424R6S7_9BACT (D-ribose pyranase n=2 Tax=Coraliomargarita sp. TMED73 TaxID=1986604 RepID=A0A424R6S7_9BACT)

HSP 1 Score: 152 bits (384), Expect = 1.810e-44
Identity = 79/143 (55.24%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    5 GIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITIRADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQAVEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGV 147
            GI  ++SP+LL TLARMGHGD I  ADA+FP+ES           +RADG  +  LL A+  L  LDSY   P+ MM+AV GD LDP++ET +R A+E   P+A   ER++RFAFY+RAR  +AVV TGETAKYGNI+L KGV
Sbjct:    4 GISPLLSPELLATLARMGHGDEIILADAHFPAESFNEN------VLRADGLRIPDLLNAILPLFELDSYVASPLSMMSAVEGDTLDPAVETAYRTAIEKHVPAAPATERIDRFAFYDRAREAFAVVMTGETAKYGNILLKKGV 140          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIE6_ECTSI7.270e-9384.76Conserved protein of fucose operon n=2 Tax=Ectocar... [more]
A0A7X1B4G5_9BACT3.990e-4658.39D-ribose pyranase n=1 Tax=Pelagicoccus albus TaxID... [more]
UPI001B8F97EE8.040e-4657.34L-fucose mutarotase n=2 Tax=Carboxylicivirga TaxID... [more]
UPI00047897061.670e-4558.74L-fucose mutarotase n=1 Tax=Alkaliflexus imshenets... [more]
A0A350YV71_9BACT2.220e-4556.25D-ribose pyranase n=1 Tax=Prolixibacteraceae bacte... [more]
UPI00177F087E3.350e-4556.67L-fucose mutarotase n=2 Tax=Pelagicoccus TaxID=455... [more]
A0A0K8R165_9BACT8.990e-4556.25D-ribose pyranase n=1 Tax=Bacteroidales bacterium ... [more]
A0A1V5G3T7_9BACT1.280e-4456.55D-ribose pyranase n=1 Tax=candidate division BRC1 ... [more]
A0A840UW31_9BACT1.360e-4455.94D-ribose pyranase n=1 Tax=Haloferula luteola TaxID... [more]
A0A424R6S7_9BACT1.810e-4455.24D-ribose pyranase n=2 Tax=Coraliomargarita sp. TME... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023750RbsD-like superfamilyGENE3D3.40.1650.10coord: 1..149
e-value: 5.1E-51
score: 174.7
IPR023750RbsD-like superfamilySUPERFAMILY102546RbsD-likecoord: 3..148
IPR007721D-ribose pyranase RbsD/L-fucose mutarotase FucUPFAMPF05025RbsD_FucUcoord: 6..147
e-value: 3.4E-36
score: 124.6
NoneNo IPR availablePANTHERPTHR31690FUCOSE MUTAROTASEcoord: 3..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig198contigP-littoralis_Contig198:118692..122700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig198.23.1mRNA_P-littoralis_Contig198.23.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig198 117830..122700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig198.23.1 ID=prot_P-littoralis_Contig198.23.1|Name=mRNA_P-littoralis_Contig198.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=165bp
MGLIGIPTIISPDLLVTLARMGHGDSICFADANFPSESLETPGRRGPITI
RADGHEVAPLLRAVSKLLPLDSYTEFPVQMMAAVPGDELDPSIETRFRQA
VEVEQPSAFKVERVERFAFYERARSCYAVVATGETAKYGNIILVKGVLGV
SEGSAAHGPAVFQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023750RbsD-like_sf
IPR007721RbsD_FucU