mRNA_P-littoralis_Contig197.28.7 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig197.28.7
Unique NamemRNA_P-littoralis_Contig197.28.7
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A7R9ZBL4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBL4_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.130e-42
Identity = 82/134 (61.19%), Postives = 100/134 (74.63%), Query Frame = 2 
Query:   83 IMSDNEYGDGDGGEEYDVFANEDDDPQVDEPAPLDPDPADMEIIDAGEAGGAGRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            +M  ++ G G G E+ DV    DD+ Q D  A  +    D E++ +   GG G +  +R+TTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIP+ IRRYLPDGSHEDW I ELI+D
Sbjct:   29 MMGADDGGRGGGNEDLDVTGERDDNAQEDMNAANNE--GDGELLGSSAPGG-GATGAERVTTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWSIDELIVD 159
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A835ZH45_9STRA (DNA-directed RNA polymerases I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH45_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.610e-41
Identity = 78/131 (59.54%), Postives = 99/131 (75.57%), Query Frame = 2 
Query:  107 DGDGGEEYDVFANEDDDPQVDEPAPLDPDPADMEIIDAGEAGGAG------RSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIM 481
            DGD  + YD FA++ D+   +E A        +E+++A E GGA       + A +RIT+KYMTKYE+ARILGTRALQISMNAP+MVD+E+ TDPLKIA KELRERKIP+KIRRYLPDGS+EDW + EL++
Sbjct:    4 DGDHADAYDAFADDGDEDMQEEVADEVGQAGQLELMEADETGGAAPGAPPVKPAQERITSKYMTKYEKARILGTRALQISMNAPIMVDLENMTDPLKIAEKELRERKIPIKIRRYLPDGSYEDWALEELMI 134
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: D8LKY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKY3_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.080e-39
Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 2 
Query:   86 MSDNEYGDGDGGEEYDVFANEDDDPQVDEPAPLDPDPADMEIIDAGEAGGAG-RSADDRITTKYMTKYERARILGTRALQI 325
            MSDNEYGDGDGGEEYDVFANEDDDPQVDEP PL+ DPADME++DA +AGGAG RSADDRITTKYMTKYERARILGTRALQI
Sbjct:    1 MSDNEYGDGDGGEEYDVFANEDDDPQVDEPTPLEADPADMEVVDAADAGGAGLRSADDRITTKYMTKYERARILGTRALQI 81
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A448ZN00_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448ZN00_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.430e-39
Identity = 75/133 (56.39%), Postives = 94/133 (70.68%), Query Frame = 2 
Query:   92 DNEYGDGDGGEEYDVFANEDDDPQVDEPAPLDPDPADMEIIDAGE--AGGAGRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            +++YGDGD  +  DV  + DDD                 ++  G       G +A +R+TT+Y+TKYERAR+LGTRALQISMNAPVMVD++ ETDPL+IA KELRERKIP+ +RRYLPDGSHEDWGI ELI+D
Sbjct:   39 EDDYGDGDDXDMLDVTGDRDDD-----------------VMTEGNDLLVSTGTAAAERVTTRYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLRIAEKELRERKIPIIVRRYLPDGSHEDWGIDELIVD 154
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A1Z5JVB2_FISSO (DNA-directed RNA polymerases I, II, and III subunit RPABC2 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVB2_FISSO)

HSP 1 Score: 145 bits (367), Expect = 3.550e-39
Identity = 82/146 (56.16%), Postives = 100/146 (68.49%), Query Frame = 2 
Query:   86 MSDNEYGDGDGG---EEYDVFANEDDDPQVDEPAPLDPDPADMEII----------DAGEAGGAGRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            MSD+E   G GG    E  VF  EDD P+  E   L  D   +++           +  E GG   +A +RITT+Y+TKYE+AR+LGTRALQISMNAPVMVD++ ETDPLKIA KELRERKIP+ IRRY+PDGSHEDW + ELI+D
Sbjct:    1 MSDDEDPIGSGGGFDNEGGVF--EDDQPEAAEDDELQSDDEGLDVTGEHTSIVGVGEGSEGGGRSVAAAERITTRYLTKYEKARVLGTRALQISMNAPVMVDLDGETDPLKIAEKELRERKIPIIIRRYMPDGSHEDWAVDELIVD 144
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A6S9M2J6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M2J6_HETAK)

HSP 1 Score: 145 bits (367), Expect = 3.770e-39
Identity = 81/140 (57.86%), Postives = 102/140 (72.86%), Query Frame = 2 
Query:   86 MSDNEYGDGDGGEEYDVFANEDDDPQV-------DEPAPLDPDPADMEIIDAGEAGGAGRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            M + +Y DGD G  Y+ F +E+  P+V       D+   LD     +E+++  E     +  ++RITTKYMTKYERARILGTRALQISMNAPVMVDIE ETDPL+IAMKELRE+KIP+ +RRYLPDGS+EDWG  ELI++
Sbjct:    1 MEEEDY-DGDEGNAYEAFIDEE--PEVMEEAGEGDDEEALDDGKPKVELLEQTEQQAIKQ--ENRITTKYMTKYERARILGTRALQISMNAPVMVDIEGETDPLRIAMKELREKKIPIIVRRYLPDGSYEDWGADELIVE 135
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A7C9CIH7_OPUST (DNA-directed RNA polymerase n=4 Tax=Caryophyllales TaxID=3524 RepID=A0A7C9CIH7_OPUST)

HSP 1 Score: 145 bits (366), Expect = 4.690e-39
Identity = 78/133 (58.65%), Postives = 98/133 (73.68%), Query Frame = 2 
Query:   86 MSDNEYGDGDGGEEYDVFANEDDDPQVDEPAPLDPDPADMEIIDAGEAGGAGRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            M+D++Y D D G E +    E ++ + DE    D D  D  +++  E  G G+    R T+KYMTKYERARILGTRALQISMNAPVMV++E ETDPL+IAMKELR+RKIP  IRRYLPDGS+EDWG+ ELI++
Sbjct:    1 MADDDYNDVDMGYEEEPPEPEIEEGEEDENVQQDEDVNDP-LLEGEEKEGDGKEHKQRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRYLPDGSYEDWGVDELIVE 132
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A5P1E299_ASPOF (Uncharacterized protein n=2 Tax=Petrosaviidae TaxID=1437197 RepID=A0A5P1E299_ASPOF)

HSP 1 Score: 144 bits (364), Expect = 9.550e-39
Identity = 79/138 (57.25%), Postives = 102/138 (73.91%), Query Frame = 2 
Query:   86 MSDNEYGDGDGGEEYDVFANEDDDPQVDEPAPLDPDPADMEIID---AGEAGGAGRSADDRI--TTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            M+D +Y D D G     + +E  +P+++E A +D +  + ++ D    GEA     ++ +R   TTKYMTKYERARILGTRALQISMNAPVMV++E ETDPL+IAMKELRERKIP  IRRYLPDGS+EDWG+ ELI++
Sbjct:    1 MADEDYNDMDMG-----YEDEPPEPEIEEGAEIDAENNNEDVPDDIVGGEAEDKDEASVERSRKTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSYEDWGVDELIVE 133
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A7J7MYX9_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MYX9_9MAGN)

HSP 1 Score: 144 bits (364), Expect = 1.080e-38
Identity = 80/141 (56.74%), Postives = 103/141 (73.05%), Query Frame = 2 
Query:   86 MSDNEYGDGDGGEEYDVFANEDDDPQVDEPAPLDPDPADME-----IIDAGE-AGGAGRSAD--DRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            M+D++Y D D G     + +E  +P+++E    +P+  D E     ++  GE  GG   + +  DR T+KYMTKYERARILGTRALQISMNAPVMV++E ETDPL+IAMKELRERKIP  IRR+LPDGSHEDWG+ ELI++
Sbjct:    1 MADDDYNDMDMG----TYEDEPAEPEIEEGMEEEPENNDAEDIPDQVVGEGEDKGGQTVTGERKDRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRFLPDGSHEDWGVDELIVE 137
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BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Match: A0A7S2E4M0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E4M0_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.140e-38
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 2 
Query:  200 DMEIIDAGEAGGAGRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIAMKELRERKIPMKIRRYLPDGSHEDWGIAELIMD 484
            D+E++ +   GG   S  +R+TTKY+TKYERAR+LGTRALQISMNAPVMVD++ ETDPLKIAMKELRERKIP+ IRRYLPDGSHEDW I ELI+D
Sbjct:   69 DLELLGSSAPGG---SRAERVTTKYLTKYERARVLGTRALQISMNAPVMVDLDGETDPLKIAMKELRERKIPIIIRRYLPDGSHEDWKIDELIVD 160
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.28.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9ZBL4_9STRA6.130e-4261.19Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A835ZH45_9STRA1.610e-4159.54DNA-directed RNA polymerases I n=1 Tax=Tribonema m... [more]
D8LKY3_ECTSI1.080e-3990.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448ZN00_9STRA3.430e-3956.39Uncharacterized protein n=2 Tax=Pseudo-nitzschia T... [more]
A0A1Z5JVB2_FISSO3.550e-3956.16DNA-directed RNA polymerases I, II, and III subuni... [more]
A0A6S9M2J6_HETAK3.770e-3957.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7C9CIH7_OPUST4.690e-3958.65DNA-directed RNA polymerase n=4 Tax=Caryophyllales... [more]
A0A5P1E299_ASPOF9.550e-3957.25Uncharacterized protein n=2 Tax=Petrosaviidae TaxI... [more]
A0A7J7MYX9_9MAGN1.080e-3856.74Uncharacterized protein n=1 Tax=Kingdonia uniflora... [more]
A0A7S2E4M0_9STRA1.140e-3873.68Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig197contigP-littoralis_Contig197:168141..171850 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog132113.XP_003485021.1
Preferred namePOLR2F
PFAMsRNA_pol_Rpb6
Model size1131
Max annot lvl33208|Metazoa
KEGG rclassRC02795
KEGG koko:K03014
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05016,ko05169,map00230,map00240,map01100,map03020,map04623,map05016,map05169
KEGG ModuleM00180,M00181,M00182
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0001650,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006383,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032502,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0040029,GO:0042221,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
Exons2
Evalue3.92e-42
EggNOG OGsCOG1758@1|root,KOG3405@2759|Eukaryota,3A3U5@33154|Opisthokonta,3BPZF@33208|Metazoa,3D6JK@33213|Bilateria,41ZAK@6656|Arthropoda,3SMSU@50557|Insecta,46IIZ@7399|Hymenoptera
Ec32 ortholog descriptionArchaeal RpoK/eukaryotic RPB6 RNA polymerase subunit
Ec32 orthologEc-11_006010.1
DescriptionRNA polymerase Rpb6
Cds size402
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789944.7471573-UTR-P-littoralis_Contig197:168140..1687841680789944.7471573-UTR-P-littoralis_Contig197:168140..168784Pylaiella littoralis U1_48UTRP-littoralis_Contig197 168141..168784 -
1680789944.7798212-UTR-P-littoralis_Contig197:171765..1718501680789944.7798212-UTR-P-littoralis_Contig197:171765..171850Pylaiella littoralis U1_48UTRP-littoralis_Contig197 171766..171850 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789944.762205-CDS-P-littoralis_Contig197:168784..1689441680789944.762205-CDS-P-littoralis_Contig197:168784..168944Pylaiella littoralis U1_48CDSP-littoralis_Contig197 168785..168944 -
1680789944.7711167-CDS-P-littoralis_Contig197:171523..1717651680789944.7711167-CDS-P-littoralis_Contig197:171523..171765Pylaiella littoralis U1_48CDSP-littoralis_Contig197 171524..171765 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig197.28.7prot_P-littoralis_Contig197.28.7Pylaiella littoralis U1_48polypeptideP-littoralis_Contig197 168785..171765 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig197.28.7

>prot_P-littoralis_Contig197.28.7 ID=prot_P-littoralis_Contig197.28.7|Name=mRNA_P-littoralis_Contig197.28.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=134bp
MSDNEYGDGDGGEEYDVFANEDDDPQVDEPAPLDPDPADMEIIDAGEAGG
AGRSADDRITTKYMTKYERARILGTRALQISMNAPVMVDIESETDPLKIA
MKELRERKIPMKIRRYLPDGSHEDWGIAELIMD*
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mRNA from alignment at P-littoralis_Contig197:168141..171850-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig197.28.7 ID=mRNA_P-littoralis_Contig197.28.7|Name=mRNA_P-littoralis_Contig197.28.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=3710bp|location=Sequence derived from alignment at P-littoralis_Contig197:168141..171850- (Pylaiella littoralis U1_48)
CGCCGCTGTGTCGCTGTGTCTCACCTAACTGCTGTCTCTCTCTCGTGCCG
TGCTGCTGTCTCTCGCACTCCAAACAACAACCATCATGTCGGACAATGAG
TACGGGGATGGAGATGGAGGGGAGGAGTATGATGTCTTCGCAAATGAGGA
TGACGACCCGCAAGTTGACGAGCCGGCGCCTTTGGACCCCGATCCCGCGG
ACATGGAGATAATAGACGCTGGGGAGGCCGGAGGGGCGGGGAGGAGCGCA
GACGACCGCATAACGACCAAGTACATGACAAAGTATGAGCGGGCGCGGAT
CCTGGGGACAAGAGCATTACAAATAAGGTGTGCTACACATACTTATGTGC
TCATGGTGGAGGGGAGAAAGCTCCTTTTTGAAACCAGATATGATACCTCA
CCGGGTGGACGAATGCCCTTACTGACCAAGGTGCCTGACCCGGAAAGACC
TTGTGTAGACCTTGTGAAGGTGTTCACCTCCCGATCTCGATCGAAGTCAC
CTTGACAAGGTCTTCACAAGGTCATTCGAGGTCAGGCACCTTTGCTAGTG
GGGGCATTTGTCCACCTGTGCTGCGGCACCCATTTGATGCAATACTGCTG
TATCTGTTCTCTGTGCTGTGCGCAGCCAAGTGCGCCCATAAACCAAGCAG
ACTTCGTTGCTCGACAGCAGCGTCGTGCGGTTCTCCCTAAAACAGGAAAG
AAATATTGCGCAGCAACGACAACACCATTTCCTCTCATGTATGACATATT
GTCCGTAACGTTACGCTCAGTTTTTCCCGCGCCTGTAGATGCGCCAGTAC
TGGCACAGAAGGAGAGCATCACAGGTTATTTCCATTGTGTTTGGAGGCAG
ACACTCTCTCAGACATGCACAGGAGGTTTCCGCCCTCCAGCTTCCACACC
CCAAAAGCGGATGCCCCCCCAAGAAAAGCGTACCCTGACTCCGCCCATCA
AGAGAGGTGGATAGCTTGGTTGCTGTGCCTGGTGAAAGTTCCAGGTGGCT
GTTGGTGGTGAACAGCCTTACTGGCAATACGTGTTGCCGTGTACTGGTGG
CCCAAGTACTGGCGCATTTACGGGCGCCGCAATTTCTCCCCCGAAACGTT
CTTTTTTTCCCATGATACGAAGACATCGATTATCAGTCATGCAATGTATT
CGCCTCTATCTCCAGACGAGGATCTGGAGTAGATTGGCGACAGAAACGAA
AAATAAAATTATTTCACATGCACCGTTGCAGCTGCCCTGGGTTATCAGGC
TCAACAAGACTATTTGGTGGTCCGTCTTGTGTGACACAATTTGGTGGTCT
TGCGTGACATATGTTGCATCATGTGCTGAGTATAGGGTTCGTTATTGCAA
TTTTCGATTGGCGCGCTCTGCTGCGATATTAGTCTCCGAGTGGCCAGCAA
TGGCGGCAGGCCAGCGGGGCGAAGGGCAATAGGGGGGAGGGGGGATCATA
ACGCCGTACAATTCGAAAAATCCTGTGCACAGCAGTAGCAGAGGGGTACC
TGGAAGAACTGCCCCACAGCAGTAGTGGCAATAGTGCCCTTGCATCCACC
GACTTCTCCTCCACGGGTCCGGCGTCTGGGGACATGGTTTGACTTTTTTA
ACACCCGACGGGGGGCGAGGAATGAGGTTTCTCGCCTAAGTGTGGAATAC
CTAGAGCAGAGCCTGAGGACTGTGTTGAGTATTTCAAAATGTGAGCCTTA
CGTTGCTTGAAGACCACGTGTGTCCAGAGCTCGCTGTGGAACAACAGCAC
CAGCGTGTCAGTCGACTTTCCCCCACTTTGTGCCGACCCACCACACAGCA
CTGCATCCATCATGACCGAACAACAACACGATCGACAGACAAAGGGCGCT
TGCCCCCAACCCTGACCCGACATCGCCCAGCAGCTGGCCGGGATTTCCCA
GAGCGCCACAAATGAGTGCCCACGCGCTGTGTGCCAATCAGGCTGCCCAC
GTGAACTTATTTATTTTTACGGTCAAGGCCCCATCTATCTTATATCGTCG
GCCGAAATGACCACCGAACGTACGCGCCTCCGAGCTTGTCCCGCGCGATT
CAATGTTTAAACGTGTGTCTGAGGAGAACCCGTGCACACTCGCTCTCTCG
CGGAGCCCATCGACAACGAAAACAACTCCAGAGCTTATTGCGCCAGACGC
ACGTGCCGTACCGTAGGTTGCATAAGATACCACACCGGCATGTTGACATT
TTAGAACTTGAAAAAAGATACACCAGGTGTGGTTTTGTACTTCGAAGTAT
TTTTTACCTGGGGGTGGTTTCTTGTGTTACCCTTTAATTACATTATGTGT
ATAGCGCGTTTTCCGGGGTTTAATTTTTTTCACACCGGTGTGGTATGGTT
TAATATTTCTATCATATGTATGCAACCTACGGTACTGGGTCGTGTATGTT
CCCGTACCGCCTGGACCGATTTTGGAGGCTCGATTGCTCCATGGCAGGAA
GAGCGCCGATGCCGGAAAGGGCGATCGACGCTCGAACCATCTCGCCGAGA
GGTTGCCGACGGCGTCCCACAAGCACTCTAATGCTGTGTGCCTTCGTGCT
GTGGAGAGCTTGTGATGTCCCCACGTCTTGAGCGTTGACCCGACTCGTTC
GCTCATGATTCCGGGAGGGTACAGCAGTTTGGTAGAGAGAAAGAACAGCA
GGGAGTAACAGATAGAGGCTCATGTTTCTTTCCCTGCCGTATTTGAACCG
GCGTGATGTACACTGCTGCTGTAGCAGCCAGCAATGTGGAGTAGTTGAGC
CGTGAAAATCGGTCCAGGGATATATCCGGTATCATCTTCCGCGACACCTA
CCAGACGGTATTCTCAAACGCAATTTTATCTGCTTAAGAGTACGGTGCAC
TTACCAACTGTCTCATGTTTGCACGTTTTGTCCCGTCTCTCGTTTCTTCA
CCCAAGCATGAACGCGCCGGTGATGGTAGACATTGAGAGCGAAACGGATC
CGTTGAAGATTGCCATGAAGGAGTTGAGGGAGCGGAAGATCCCGATGAAA
ATCCGTCGGTATTTGCCAGACGGCAGCCACGAAGACTGGGGCATTGCTGA
GCTCATTATGGACTAAGGCTCCTAGTTTAAGTGATGTGCTTGGTTAGTGT
TGCTTTAATACGAGCACGATGTACGTAGTGTTCGCGTGAAGTTTTAGATC
CCTGTAGATAAAGTAGTGGAGCGTGTTGCCGCGGATGTCACCGTGCGTAC
AAATCATGACGCCAGTATCGCGGAACTACGCTACAGAGCGAGCATTGGGT
CGAGGAGACTCTTATTTTGTGGGGCTTGTTTAAGGAAAGACCTGGTTGGG
AGGAAAGTGACATTGTCTACAGCATCGTTGACGCAACTTGTGGTTGTTGC
CGTTCATGGGGTCGCGAGTGCTGGCTGTTTTTATGTGAGGTACGTGTGAT
GCGTTCATGCAAAAGCCATTTCGTGATTTTCAGAGTTGGGAGACATCGTT
TACACAAAACTGATCTCAGAGCTCGTTGGCTGTGCCGGGAAACAAGAACG
TGCTTGAAGTCGAGTCCGCTACTGTACGCTGGTTGAAGCAGCAGTGCGTC
ACCGAATGCCCCGGGTTTCATAAAAAATGTTAACAAGTCGCTGTTCTTGT
CATGCCGTTTGTTTAATATCCATCGCCAACCCGGACGACGCAAGAAGCAC
CATATCTGGCTCCCGGCGATACACTCTTTTTTCGCACCACCCACCCCTCA
CAACCTCGCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig197:168141..171850-

>mRNA_P-littoralis_Contig197.28.7 ID=mRNA_P-littoralis_Contig197.28.7|Name=mRNA_P-littoralis_Contig197.28.7|organism=Pylaiella littoralis U1_48|type=CDS|length=402bp|location=Sequence derived from alignment at P-littoralis_Contig197:168141..171850- (Pylaiella littoralis U1_48)
ATGTCGGACAATGAGTACGGGGATGGAGATGGAGGGGAGGAGTATGATGT
CTTCGCAAATGAGGATGACGACCCGCAAGTTGACGAGCCGGCGCCTTTGG
ACCCCGATCCCGCGGACATGGAGATAATAGACGCTGGGGAGGCCGGAGGG
GCGGGGAGGAGCGCAGACGACCGCATAACGACCAAGTACATGACAAAGTA
TGAGCGGGCGCGGATCCTGGGGACAAGAGCATTACAAATAAGCATGAACG
CGCCGGTGATGGTAGACATTGAGAGCGAAACGGATCCGTTGAAGATTGCC
ATGAAGGAGTTGAGGGAGCGGAAGATCCCGATGAAAATCCGTCGGTATTT
GCCAGACGGCAGCCACGAAGACTGGGGCATTGCTGAGCTCATTATGGACT
AA
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